EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000007210 (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 17844 bases
Position: chrJH603178.1:6879826-6897669
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000007529	MMR_HSR1	PF01926.23	6.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000007561	LSG1-201	3296	-	ENSFALP00000007529	654 (aa)	-	U3JXM5

Gene Model

Click here to download ENSFALG00000007210's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000007210's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000007210	LSG1	94	66.721	ENSG00000041802	LSG1	92	66.721	Homo_sapiens
ENSFALG00000007210	LSG1	94	64.019	ENSAPOG00000009694	lsg1	93	64.506	Acanthochromis_polyacanthus
ENSFALG00000007210	LSG1	94	65.798	ENSAMEG00000009343	LSG1	93	65.798	Ailuropoda_melanoleuca
ENSFALG00000007210	LSG1	94	61.874	ENSACIG00000012406	lsg1	92	61.889	Amphilophus_citrinellus
ENSFALG00000007210	LSG1	94	62.399	ENSAOCG00000016066	lsg1	93	63.533	Amphiprion_ocellaris
ENSFALG00000007210	LSG1	94	62.237	ENSAPEG00000003252	lsg1	93	63.047	Amphiprion_percula
ENSFALG00000007210	LSG1	94	62.825	ENSATEG00000011794	lsg1	92	62.561	Anabas_testudineus
ENSFALG00000007210	LSG1	94	63.449	ENSACAG00000004222	LSG1	97	62.857	Anolis_carolinensis
ENSFALG00000007210	LSG1	94	66.558	ENSANAG00000021153	LSG1	92	66.558	Aotus_nancymaae
ENSFALG00000007210	LSG1	99	59.459	ENSACLG00000000520	lsg1	99	59.492	Astatotilapia_calliptera
ENSFALG00000007210	LSG1	94	60.611	ENSAMXG00000008271	lsg1	98	58.815	Astyanax_mexicanus
ENSFALG00000007210	LSG1	94	66.232	ENSBTAG00000008461	LSG1	92	66.232	Bos_taurus
ENSFALG00000007210	LSG1	66	52.308	WBGene00016907	C53H9.2	88	52.308	Caenorhabditis_elegans
ENSFALG00000007210	LSG1	94	65.798	ENSCJAG00000013962	LSG1	92	66.287	Callithrix_jacchus
ENSFALG00000007210	LSG1	94	65.203	ENSCAFG00000013445	LSG1	97	65.203	Canis_familiaris
ENSFALG00000007210	LSG1	94	65.528	ENSCAFG00020002216	LSG1	98	65.528	Canis_lupus_dingo
ENSFALG00000007210	LSG1	94	66.775	ENSCHIG00000015769	LSG1	92	66.775	Capra_hircus
ENSFALG00000007210	LSG1	94	66.069	ENSTSYG00000001447	LSG1	92	66.069	Carlito_syrichta
ENSFALG00000007210	LSG1	94	63.857	ENSCAPG00000009856	LSG1	97	63.474	Cavia_aperea
ENSFALG00000007210	LSG1	94	64.239	ENSCCAG00000035744	LSG1	92	65.090	Cebus_capucinus
ENSFALG00000007210	LSG1	94	66.884	ENSCATG00000042060	LSG1	92	65.742	Cercocebus_atys
ENSFALG00000007210	LSG1	94	66.721	ENSCSAG00000008796	LSG1	85	66.721	Chlorocebus_sabaeus
ENSFALG00000007210	LSG1	94	70.684	ENSCPBG00000015941	LSG1	77	70.684	Chrysemys_picta_bellii
ENSFALG00000007210	LSG1	65	61.616	ENSCING00000007079	-	91	61.616	Ciona_intestinalis
ENSFALG00000007210	LSG1	71	61.809	ENSCSAVG00000002514	-	84	60.891	Ciona_savignyi
ENSFALG00000007210	LSG1	94	66.232	ENSCANG00000030709	LSG1	92	66.232	Colobus_angolensis_palliatus
ENSFALG00000007210	LSG1	99	63.359	ENSCGRG00001019846	Lsg1	99	63.444	Cricetulus_griseus_chok1gshd
ENSFALG00000007210	LSG1	99	63.359	ENSCGRG00000014617	Lsg1	99	63.444	Cricetulus_griseus_crigri
ENSFALG00000007210	LSG1	94	61.709	ENSCSEG00000008522	lsg1	92	60.759	Cynoglossus_semilaevis
ENSFALG00000007210	LSG1	94	63.029	ENSCVAG00000002484	lsg1	92	63.192	Cyprinodon_variegatus
ENSFALG00000007210	LSG1	94	62.439	ENSDARG00000015352	lsg1	92	62.439	Danio_rerio
ENSFALG00000007210	LSG1	94	65.964	ENSDNOG00000006224	LSG1	92	66.016	Dasypus_novemcinctus
ENSFALG00000007210	LSG1	76	58.854	FBgn0266284	Ns3	83	56.585	Drosophila_melanogaster
ENSFALG00000007210	LSG1	78	60.352	ENSETEG00000003888	LSG1	78	60.694	Echinops_telfairi
ENSFALG00000007210	LSG1	90	55.372	ENSEBUG00000003119	lsg1	85	55.351	Eptatretus_burgeri
ENSFALG00000007210	LSG1	94	67.374	ENSEASG00005000678	LSG1	99	64.679	Equus_asinus_asinus
ENSFALG00000007210	LSG1	94	67.700	ENSECAG00000017659	LSG1	92	67.700	Equus_caballus
ENSFALG00000007210	LSG1	76	64.103	ENSEEUG00000015217	LSG1	75	64.103	Erinaceus_europaeus
ENSFALG00000007210	LSG1	94	61.389	ENSELUG00000023973	lsg1	92	60.806	Esox_lucius
ENSFALG00000007210	LSG1	99	64.427	ENSFCAG00000024957	LSG1	99	64.427	Felis_catus
ENSFALG00000007210	LSG1	94	64.495	ENSFDAG00000017373	LSG1	92	64.274	Fukomys_damarensis
ENSFALG00000007210	LSG1	94	62.764	ENSFHEG00000003680	lsg1	92	62.927	Fundulus_heteroclitus
ENSFALG00000007210	LSG1	83	68.525	ENSGMOG00000015834	lsg1	88	68.525	Gadus_morhua
ENSFALG00000007210	LSG1	99	83.461	ENSGALG00000007058	LSG1	87	83.614	Gallus_gallus
ENSFALG00000007210	LSG1	94	62.866	ENSGAFG00000015831	lsg1	99	59.545	Gambusia_affinis
ENSFALG00000007210	LSG1	94	61.316	ENSGACG00000009323	lsg1	92	60.835	Gasterosteus_aculeatus
ENSFALG00000007210	LSG1	94	66.290	ENSGGOG00000000520	LSG1	92	66.290	Gorilla_gorilla
ENSFALG00000007210	LSG1	99	60.030	ENSHBUG00000005659	lsg1	99	60.061	Haplochromis_burtoni
ENSFALG00000007210	LSG1	94	60.806	ENSHGLG00000017390	LSG1	92	62.075	Heterocephalus_glaber_female
ENSFALG00000007210	LSG1	94	60.806	ENSHGLG00100018587	LSG1	92	62.075	Heterocephalus_glaber_male
ENSFALG00000007210	LSG1	98	58.584	ENSHCOG00000016848	lsg1	99	57.375	Hippocampus_comes
ENSFALG00000007210	LSG1	94	62.866	ENSIPUG00000008631	lsg1	92	62.215	Ictalurus_punctatus
ENSFALG00000007210	LSG1	77	63.636	ENSSTOG00000010234	LSG1	92	64.822	Ictidomys_tridecemlineatus
ENSFALG00000007210	LSG1	94	66.069	ENSJJAG00000015513	Lsg1	92	66.069	Jaculus_jaculus
ENSFALG00000007210	LSG1	94	61.812	ENSKMAG00000009681	lsg1	92	61.327	Kryptolebias_marmoratus
ENSFALG00000007210	LSG1	94	60.261	ENSLBEG00000024261	lsg1	92	60.749	Labrus_bergylta
ENSFALG00000007210	LSG1	94	65.605	ENSLACG00000013399	LSG1	93	65.605	Latimeria_chalumnae
ENSFALG00000007210	LSG1	97	62.773	ENSLOCG00000004918	lsg1	99	60.089	Lepisosteus_oculatus
ENSFALG00000007210	LSG1	94	64.668	ENSLAFG00000012919	-	92	64.668	Loxodonta_africana
ENSFALG00000007210	LSG1	94	66.884	ENSMFAG00000039903	LSG1	92	65.742	Macaca_fascicularis
ENSFALG00000007210	LSG1	94	66.884	ENSMMUG00000010708	LSG1	92	66.884	Macaca_mulatta
ENSFALG00000007210	LSG1	94	66.884	ENSMNEG00000031538	LSG1	92	65.742	Macaca_nemestrina
ENSFALG00000007210	LSG1	94	66.884	ENSMLEG00000041184	LSG1	92	66.884	Mandrillus_leucophaeus
ENSFALG00000007210	LSG1	94	60.543	ENSMAMG00000000470	lsg1	93	60.383	Mastacembelus_armatus
ENSFALG00000007210	LSG1	99	60.030	ENSMZEG00005017865	lsg1	99	60.061	Maylandia_zebra
ENSFALG00000007210	LSG1	90	85.399	ENSMGAG00000007050	LSG1	99	85.399	Meleagris_gallopavo
ENSFALG00000007210	LSG1	96	58.740	ENSMAUG00000016976	Lsg1	97	59.528	Mesocricetus_auratus
ENSFALG00000007210	LSG1	94	66.721	ENSMICG00000049087	LSG1	92	66.721	Microcebus_murinus
ENSFALG00000007210	LSG1	94	64.286	ENSMOCG00000022136	Lsg1	92	64.448	Microtus_ochrogaster
ENSFALG00000007210	LSG1	83	69.872	ENSMMOG00000008884	lsg1	97	69.427	Mola_mola
ENSFALG00000007210	LSG1	94	57.971	ENSMODG00000019828	LSG1	92	57.512	Monodelphis_domestica
ENSFALG00000007210	LSG1	99	63.470	MGP_CAROLIEiJ_G0020648	Lsg1	99	63.775	Mus_caroli
ENSFALG00000007210	LSG1	99	63.927	ENSMUSG00000022538	Lsg1	99	64.231	Mus_musculus
ENSFALG00000007210	LSG1	94	67.154	MGP_PahariEiJ_G0016352	Lsg1	99	64.448	Mus_pahari
ENSFALG00000007210	LSG1	99	64.384	MGP_SPRETEiJ_G0021544	Lsg1	99	64.536	Mus_spretus
ENSFALG00000007210	LSG1	94	65.528	ENSMPUG00000003734	LSG1	93	65.528	Mustela_putorius_furo
ENSFALG00000007210	LSG1	94	67.915	ENSMLUG00000012548	LSG1	92	67.915	Myotis_lucifugus
ENSFALG00000007210	LSG1	99	62.595	ENSNGAG00000021872	Lsg1	99	61.679	Nannospalax_galili
ENSFALG00000007210	LSG1	94	66.558	ENSNLEG00000008293	LSG1	92	66.558	Nomascus_leucogenys
ENSFALG00000007210	LSG1	70	65.928	ENSMEUG00000009041	-	82	67.151	Notamacropus_eugenii
ENSFALG00000007210	LSG1	99	59.636	ENSONIG00000002635	lsg1	99	59.077	Oreochromis_niloticus
ENSFALG00000007210	LSG1	94	68.019	ENSOANG00000012742	LSG1	96	67.045	Ornithorhynchus_anatinus
ENSFALG00000007210	LSG1	94	66.938	ENSOCUG00000004817	LSG1	99	64.482	Oryctolagus_cuniculus
ENSFALG00000007210	LSG1	94	61.712	ENSORLG00000007695	lsg1	92	61.712	Oryzias_latipes
ENSFALG00000007210	LSG1	94	62.136	ENSORLG00020016286	lsg1	92	62.136	Oryzias_latipes_hni
ENSFALG00000007210	LSG1	94	61.551	ENSORLG00015012025	lsg1	92	61.228	Oryzias_latipes_hsok
ENSFALG00000007210	LSG1	94	60.778	ENSOMEG00000022379	lsg1	92	61.102	Oryzias_melastigma
ENSFALG00000007210	LSG1	94	64.677	ENSOGAG00000003475	LSG1	92	65.217	Otolemur_garnettii
ENSFALG00000007210	LSG1	94	66.287	ENSOARG00000020403	LSG1	92	66.287	Ovis_aries
ENSFALG00000007210	LSG1	94	66.395	ENSPPAG00000029271	LSG1	92	66.395	Pan_paniscus
ENSFALG00000007210	LSG1	99	63.636	ENSPPRG00000010281	LSG1	99	63.636	Panthera_pardus
ENSFALG00000007210	LSG1	94	66.775	ENSPTIG00000010789	LSG1	99	64.122	Panthera_tigris_altaica
ENSFALG00000007210	LSG1	94	66.232	ENSPTRG00000015760	LSG1	92	66.232	Pan_troglodytes
ENSFALG00000007210	LSG1	94	66.721	ENSPANG00000018249	LSG1	92	65.579	Papio_anubis
ENSFALG00000007210	LSG1	94	61.264	ENSPKIG00000002895	lsg1	93	60.714	Paramormyrops_kingsleyae
ENSFALG00000007210	LSG1	94	68.438	ENSPSIG00000009821	LSG1	96	66.989	Pelodiscus_sinensis
ENSFALG00000007210	LSG1	94	62.480	ENSPMGG00000000931	lsg1	97	61.997	Periophthalmus_magnuspinnatus
ENSFALG00000007210	LSG1	94	65.260	ENSPEMG00000012082	-	92	64.984	Peromyscus_maniculatus_bairdii
ENSFALG00000007210	LSG1	94	60.287	ENSPMAG00000007451	lsg1	93	60.287	Petromyzon_marinus
ENSFALG00000007210	LSG1	94	67.725	ENSPCIG00000013890	LSG1	75	67.725	Phascolarctos_cinereus
ENSFALG00000007210	LSG1	94	63.710	ENSPFOG00000021882	lsg1	92	64.032	Poecilia_formosa
ENSFALG00000007210	LSG1	94	62.742	ENSPLAG00000019536	lsg1	92	63.226	Poecilia_latipinna
ENSFALG00000007210	LSG1	94	62.862	ENSPMEG00000017281	lsg1	92	63.023	Poecilia_mexicana
ENSFALG00000007210	LSG1	94	53.035	ENSPREG00000006048	lsg1	92	53.035	Poecilia_reticulata
ENSFALG00000007210	LSG1	92	62.500	ENSPPYG00000014425	LSG1	99	61.944	Pongo_abelii
ENSFALG00000007210	LSG1	80	56.381	ENSPCAG00000005511	LSG1	78	55.367	Procavia_capensis
ENSFALG00000007210	LSG1	94	65.534	ENSPCOG00000012360	LSG1	92	66.395	Propithecus_coquereli
ENSFALG00000007210	LSG1	99	59.459	ENSPNYG00000021994	lsg1	99	59.492	Pundamilia_nyererei
ENSFALG00000007210	LSG1	94	62.621	ENSPNAG00000015533	lsg1	93	62.338	Pygocentrus_nattereri
ENSFALG00000007210	LSG1	99	63.308	ENSRNOG00000001727	Lsg1	99	64.297	Rattus_norvegicus
ENSFALG00000007210	LSG1	94	65.905	ENSRBIG00000029053	LSG1	92	65.905	Rhinopithecus_bieti
ENSFALG00000007210	LSG1	94	65.905	ENSRROG00000037702	LSG1	92	65.905	Rhinopithecus_roxellana
ENSFALG00000007210	LSG1	66	49.541	YGL099W	LSG1	64	54.645	Saccharomyces_cerevisiae
ENSFALG00000007210	LSG1	94	66.395	ENSSBOG00000034938	LSG1	92	66.395	Saimiri_boliviensis_boliviensis
ENSFALG00000007210	LSG1	79	64.850	ENSSHAG00000003487	LSG1	99	63.602	Sarcophilus_harrisii
ENSFALG00000007210	LSG1	99	60.736	ENSSFOG00015008955	lsg1	99	59.789	Scleropages_formosus
ENSFALG00000007210	LSG1	94	63.040	ENSSDUG00000004622	lsg1	92	63.166	Seriola_dumerili
ENSFALG00000007210	LSG1	94	62.987	ENSSLDG00000010869	lsg1	92	62.662	Seriola_lalandi_dorsalis
ENSFALG00000007210	LSG1	70	69.298	ENSSARG00000012981	LSG1	69	69.298	Sorex_araneus
ENSFALG00000007210	LSG1	97	68.944	ENSSPUG00000016347	LSG1	96	67.702	Sphenodon_punctatus
ENSFALG00000007210	LSG1	79	71.429	ENSSPAG00000005508	lsg1	93	62.945	Stegastes_partitus
ENSFALG00000007210	LSG1	94	64.715	ENSSSCG00000011827	LSG1	92	64.390	Sus_scrofa
ENSFALG00000007210	LSG1	90	92.114	ENSTGUG00000009068	LSG1	100	92.114	Taeniopygia_guttata
ENSFALG00000007210	LSG1	94	58.796	ENSTRUG00000017380	lsg1	92	59.319	Takifugu_rubripes
ENSFALG00000007210	LSG1	94	62.825	ENSTNIG00000015570	lsg1	92	62.319	Tetraodon_nigroviridis
ENSFALG00000007210	LSG1	99	58.841	ENSTTRG00000000559	LSG1	99	58.079	Tursiops_truncatus
ENSFALG00000007210	LSG1	94	65.961	ENSUAMG00000012454	LSG1	93	66.829	Ursus_americanus
ENSFALG00000007210	LSG1	94	65.961	ENSUMAG00000000855	LSG1	93	66.829	Ursus_maritimus
ENSFALG00000007210	LSG1	94	62.276	ENSVPAG00000012400	LSG1	97	61.951	Vicugna_pacos
ENSFALG00000007210	LSG1	98	63.199	ENSVVUG00000008956	LSG1	99	63.199	Vulpes_vulpes
ENSFALG00000007210	LSG1	94	64.412	ENSXETG00000003451	lsg1	93	65.074	Xenopus_tropicalis
ENSFALG00000007210	LSG1	94	62.662	ENSXCOG00000003239	lsg1	92	62.662	Xiphophorus_couchianus
ENSFALG00000007210	LSG1	94	62.222	ENSXMAG00000005536	lsg1	92	63.333	Xiphophorus_maculatus