EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000007257 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 17103 bases
Position: chrJH603217.1:180293-197395
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000007572	APOBEC_N	PF08210.11	3.5e-53	1	2
ENSFALP00000007572	APOBEC_N	PF08210.11	3.5e-53	2	2
ENSFALP00000007572	APOBEC_C	PF05240.14	5.6e-34	1	2
ENSFALP00000007572	APOBEC_C	PF05240.14	5.6e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000007604	-	1428	-	ENSFALP00000007572	385 (aa)	-	U3JXR8

Gene Model

Click here to download ENSFALG00000007257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000007257's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000007257	-	61	41.176	ENSFALG00000007261	AICDA	77	41.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000007257	-	70	47.183	ENSG00000111701	APOBEC1	60	47.183	Homo_sapiens
ENSFALG00000007257	-	73	49.296	ENSAMEG00000007098	APOBEC1	65	49.296	Ailuropoda_melanoleuca
ENSFALG00000007257	-	81	50.350	ENSACAG00000028578	-	94	50.350	Anolis_carolinensis
ENSFALG00000007257	-	70	47.552	ENSANAG00000027743	APOBEC1	57	47.552	Aotus_nancymaae
ENSFALG00000007257	-	70	44.366	ENSBTAG00000014683	APOBEC1	60	44.366	Bos_taurus
ENSFALG00000007257	-	70	47.552	ENSCJAG00000005398	APOBEC1	64	47.552	Callithrix_jacchus
ENSFALG00000007257	-	70	47.183	ENSCAFG00000013901	APOBEC1	60	47.183	Canis_familiaris
ENSFALG00000007257	-	72	46.980	ENSCAFG00020003511	APOBEC1	61	46.980	Canis_lupus_dingo
ENSFALG00000007257	-	71	45.517	ENSCHIG00000011898	APOBEC1	62	45.517	Capra_hircus
ENSFALG00000007257	-	63	50.388	ENSTSYG00000029141	APOBEC1	91	50.388	Carlito_syrichta
ENSFALG00000007257	-	80	46.154	ENSCAPG00000015882	-	87	46.154	Cavia_aperea
ENSFALG00000007257	-	72	45.070	ENSCPOG00000033068	APOBEC1	65	45.070	Cavia_porcellus
ENSFALG00000007257	-	70	48.252	ENSCCAG00000022258	APOBEC1	60	48.252	Cebus_capucinus
ENSFALG00000007257	-	70	47.183	ENSCATG00000021613	APOBEC1	57	47.183	Cercocebus_atys
ENSFALG00000007257	-	72	45.775	ENSCLAG00000014645	APOBEC1	67	45.775	Chinchilla_lanigera
ENSFALG00000007257	-	55	50.459	ENSCSAG00000009817	APOBEC1	57	50.459	Chlorocebus_sabaeus
ENSFALG00000007257	-	77	46.324	ENSCPBG00000017398	-	75	46.324	Chrysemys_picta_bellii
ENSFALG00000007257	-	89	43.056	ENSCPBG00000014327	-	79	43.056	Chrysemys_picta_bellii
ENSFALG00000007257	-	85	48.529	ENSCPBG00000014328	-	84	48.529	Chrysemys_picta_bellii
ENSFALG00000007257	-	74	51.701	ENSCPBG00000014335	-	60	51.701	Chrysemys_picta_bellii
ENSFALG00000007257	-	74	62.838	ENSCPBG00000014331	-	78	48.276	Chrysemys_picta_bellii
ENSFALG00000007257	-	70	46.479	ENSCANG00000038359	APOBEC1	61	46.479	Colobus_angolensis_palliatus
ENSFALG00000007257	-	70	51.408	ENSCGRG00001011130	Apobec1	62	51.408	Cricetulus_griseus_chok1gshd
ENSFALG00000007257	-	70	51.408	ENSCGRG00000008644	Apobec1	62	51.408	Cricetulus_griseus_crigri
ENSFALG00000007257	-	70	50.704	ENSDNOG00000010926	APOBEC1	60	50.704	Dasypus_novemcinctus
ENSFALG00000007257	-	70	46.099	ENSDORG00000023717	Apobec1	66	46.099	Dipodomys_ordii
ENSFALG00000007257	-	70	48.611	ENSETEG00000004867	APOBEC1	60	48.611	Echinops_telfairi
ENSFALG00000007257	-	70	50.000	ENSEASG00005015951	APOBEC1	59	50.000	Equus_asinus_asinus
ENSFALG00000007257	-	55	54.545	ENSECAG00000017163	APOBEC1	57	54.545	Equus_caballus
ENSFALG00000007257	-	71	46.154	ENSEEUG00000009112	-	65	46.154	Erinaceus_europaeus
ENSFALG00000007257	-	64	45.802	ENSEEUG00000007530	-	61	45.802	Erinaceus_europaeus
ENSFALG00000007257	-	72	48.592	ENSFCAG00000009350	APOBEC1	60	48.592	Felis_catus
ENSFALG00000007257	-	66	44.615	ENSFDAG00000018470	APOBEC1	62	44.615	Fukomys_damarensis
ENSFALG00000007257	-	88	40.116	ENSGAGG00000006624	-	74	40.116	Gopherus_agassizii
ENSFALG00000007257	-	79	55.147	ENSGAGG00000004947	-	87	55.147	Gopherus_agassizii
ENSFALG00000007257	-	81	45.455	ENSGAGG00000021745	-	66	44.521	Gopherus_agassizii
ENSFALG00000007257	-	90	43.448	ENSGAGG00000021744	-	77	43.448	Gopherus_agassizii
ENSFALG00000007257	-	74	62.931	ENSGAGG00000011837	-	78	62.931	Gopherus_agassizii
ENSFALG00000007257	-	70	45.455	ENSHGLG00000001495	APOBEC1	60	45.455	Heterocephalus_glaber_female
ENSFALG00000007257	-	70	46.154	ENSHGLG00100002187	APOBEC1	60	46.154	Heterocephalus_glaber_male
ENSFALG00000007257	-	71	48.175	ENSSTOG00000021971	APOBEC1	98	48.454	Ictidomys_tridecemlineatus
ENSFALG00000007257	-	70	47.887	ENSJJAG00000022108	Apobec1	62	47.887	Jaculus_jaculus
ENSFALG00000007257	-	72	50.000	ENSLAFG00000030837	APOBEC1	65	50.000	Loxodonta_africana
ENSFALG00000007257	-	70	47.183	ENSMFAG00000000277	APOBEC1	57	51.376	Macaca_fascicularis
ENSFALG00000007257	-	70	47.183	ENSMNEG00000029670	APOBEC1	60	47.183	Macaca_nemestrina
ENSFALG00000007257	-	70	47.183	ENSMLEG00000036301	APOBEC1	60	47.183	Mandrillus_leucophaeus
ENSFALG00000007257	-	71	51.370	ENSMAUG00000022167	Apobec1	65	51.370	Mesocricetus_auratus
ENSFALG00000007257	-	71	50.345	ENSMICG00000043645	APOBEC1	61	50.350	Microcebus_murinus
ENSFALG00000007257	-	70	46.099	ENSMODG00000018004	APOBEC1	60	46.099	Monodelphis_domestica
ENSFALG00000007257	-	70	51.408	ENSMUSG00000040613	Apobec1	87	49.524	Mus_musculus
ENSFALG00000007257	-	70	52.113	MGP_PahariEiJ_G0022580	-	87	50.476	Mus_pahari
ENSFALG00000007257	-	70	51.408	MGP_SPRETEiJ_G0029857	Apobec1	87	49.524	Mus_spretus
ENSFALG00000007257	-	70	46.479	ENSMPUG00000017532	APOBEC1	60	46.479	Mustela_putorius_furo
ENSFALG00000007257	-	70	50.000	ENSNGAG00000022607	Apobec1	62	50.000	Nannospalax_galili
ENSFALG00000007257	-	70	47.222	ENSNLEG00000005342	APOBEC1	60	47.222	Nomascus_leucogenys
ENSFALG00000007257	-	70	47.183	ENSMEUG00000013406	APOBEC1	60	47.183	Notamacropus_eugenii
ENSFALG00000007257	-	71	49.645	ENSOPRG00000009508	-	79	49.645	Ochotona_princeps
ENSFALG00000007257	-	72	46.622	ENSOCUG00000025736	APOBEC1	55	46.622	Oryctolagus_cuniculus
ENSFALG00000007257	-	70	48.951	ENSOGAG00000026415	APOBEC1	60	48.951	Otolemur_garnettii
ENSFALG00000007257	-	70	46.479	ENSOARG00000002072	APOBEC1	59	46.479	Ovis_aries
ENSFALG00000007257	-	70	45.324	ENSPPAG00000027657	APOBEC1	56	45.324	Pan_paniscus
ENSFALG00000007257	-	72	49.296	ENSPPRG00000012182	APOBEC1	60	49.296	Panthera_pardus
ENSFALG00000007257	-	72	49.296	ENSPTIG00000020280	APOBEC1	60	49.296	Panthera_tigris_altaica
ENSFALG00000007257	-	70	47.183	ENSPTRG00000004614	APOBEC1	60	47.183	Pan_troglodytes
ENSFALG00000007257	-	70	47.183	ENSPANG00000021027	APOBEC1	60	47.183	Papio_anubis
ENSFALG00000007257	-	88	37.037	ENSPSIG00000012791	-	99	37.037	Pelodiscus_sinensis
ENSFALG00000007257	-	81	43.448	ENSPSIG00000012568	-	75	43.448	Pelodiscus_sinensis
ENSFALG00000007257	-	70	53.521	ENSPEMG00000023841	Apobec1	62	53.521	Peromyscus_maniculatus_bairdii
ENSFALG00000007257	-	70	45.775	ENSPCIG00000023973	APOBEC1	60	45.775	Phascolarctos_cinereus
ENSFALG00000007257	-	70	46.479	ENSPPYG00000004228	APOBEC1	57	46.479	Pongo_abelii
ENSFALG00000007257	-	70	47.887	ENSPCAG00000008733	APOBEC1	75	47.887	Procavia_capensis
ENSFALG00000007257	-	71	49.306	ENSPCOG00000013957	APOBEC1	63	49.306	Propithecus_coquereli
ENSFALG00000007257	-	63	45.736	ENSPVAG00000010709	APOBEC1	55	45.736	Pteropus_vampyrus
ENSFALG00000007257	-	70	50.000	ENSRNOG00000015411	Apobec1	62	50.000	Rattus_norvegicus
ENSFALG00000007257	-	70	46.154	ENSRBIG00000031161	APOBEC1	60	46.154	Rhinopithecus_bieti
ENSFALG00000007257	-	70	46.154	ENSRROG00000033576	APOBEC1	58	49.541	Rhinopithecus_roxellana
ENSFALG00000007257	-	70	47.552	ENSSBOG00000030587	APOBEC1	80	47.552	Saimiri_boliviensis_boliviensis
ENSFALG00000007257	-	70	45.775	ENSSHAG00000008925	APOBEC1	62	45.775	Sarcophilus_harrisii
ENSFALG00000007257	-	71	49.650	ENSSARG00000000032	-	83	49.650	Sorex_araneus
ENSFALG00000007257	-	63	47.656	ENSSARG00000011972	-	97	47.656	Sorex_araneus
ENSFALG00000007257	-	74	45.638	ENSSPUG00000009044	-	57	45.638	Sphenodon_punctatus
ENSFALG00000007257	-	70	45.070	ENSSSCG00000000668	APOBEC1	60	45.070	Sus_scrofa
ENSFALG00000007257	-	74	80.986	ENSTGUG00000013118	-	100	80.986	Taeniopygia_guttata
ENSFALG00000007257	-	70	46.099	ENSTBEG00000010043	APOBEC1	60	46.099	Tupaia_belangeri
ENSFALG00000007257	-	70	46.479	ENSTTRG00000014015	APOBEC1	75	46.479	Tursiops_truncatus
ENSFALG00000007257	-	70	48.592	ENSUAMG00000011636	APOBEC1	58	48.592	Ursus_americanus
ENSFALG00000007257	-	70	48.592	ENSUMAG00000016552	APOBEC1	58	48.592	Ursus_maritimus
ENSFALG00000007257	-	70	50.000	ENSVPAG00000001343	APOBEC1	60	50.000	Vicugna_pacos
ENSFALG00000007257	-	70	47.887	ENSVVUG00000010522	APOBEC1	60	47.887	Vulpes_vulpes