EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000007372 (Gene tree)
Gene ID: -
Gene Symbol: SF3B3
Alias: KIAA0017|RSE1|SAP130|SF3b130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 28387 bases
Position: chrJH603200.1:6599848-6628234
Accession: 101819894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000007696	CPSF_A	PF03178.15	9.8e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000007728	SF3B3-201	4538	XM_005052505	ENSFALP00000007696	1217 (aa)	XP_005052562	U3JY42

Gene Model

Click here to download ENSFALG00000007372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000007372's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000007372	SF3B3	100	98.932	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSFALG00000007372	SF3B3	96	93.168	ENSAPOG00000006172	sf3b3	98	93.168	Acanthochromis_polyacanthus
ENSFALG00000007372	SF3B3	100	98.770	ENSAMEG00000002187	SF3B3	100	98.770	Ailuropoda_melanoleuca
ENSFALG00000007372	SF3B3	92	90.357	ENSACIG00000016487	sf3b3	100	90.357	Amphilophus_citrinellus
ENSFALG00000007372	SF3B3	100	93.098	ENSAOCG00000007158	sf3b3	100	93.098	Amphiprion_ocellaris
ENSFALG00000007372	SF3B3	100	93.098	ENSAPEG00000022786	sf3b3	100	93.098	Amphiprion_percula
ENSFALG00000007372	SF3B3	100	93.262	ENSATEG00000013708	sf3b3	100	93.262	Anabas_testudineus
ENSFALG00000007372	SF3B3	81	98.176	ENSAPLG00000004996	SF3B3	100	98.176	Anas_platyrhynchos
ENSFALG00000007372	SF3B3	100	98.603	ENSACAG00000001817	SF3B3	100	98.603	Anolis_carolinensis
ENSFALG00000007372	SF3B3	100	98.932	ENSANAG00000028001	SF3B3	100	98.932	Aotus_nancymaae
ENSFALG00000007372	SF3B3	96	92.912	ENSACLG00000022555	sf3b3	98	92.912	Astatotilapia_calliptera
ENSFALG00000007372	SF3B3	100	92.933	ENSAMXG00000003410	sf3b3	100	92.933	Astyanax_mexicanus
ENSFALG00000007372	SF3B3	100	98.932	ENSBTAG00000010627	SF3B3	100	98.932	Bos_taurus
ENSFALG00000007372	SF3B3	100	60.374	WBGene00019323	teg-4	100	60.374	Caenorhabditis_elegans
ENSFALG00000007372	SF3B3	100	98.932	ENSCJAG00000014773	SF3B3	99	98.932	Callithrix_jacchus
ENSFALG00000007372	SF3B3	100	99.014	ENSCAFG00000020151	SF3B3	100	99.014	Canis_familiaris
ENSFALG00000007372	SF3B3	100	99.014	ENSCAFG00020020912	SF3B3	100	99.014	Canis_lupus_dingo
ENSFALG00000007372	SF3B3	100	99.014	ENSCHIG00000019822	SF3B3	100	99.014	Capra_hircus
ENSFALG00000007372	SF3B3	100	98.932	ENSTSYG00000007910	SF3B3	100	98.932	Carlito_syrichta
ENSFALG00000007372	SF3B3	84	88.101	ENSCAPG00000001484	SF3B3	92	88.101	Cavia_aperea
ENSFALG00000007372	SF3B3	100	97.617	ENSCPOG00000000586	SF3B3	100	97.617	Cavia_porcellus
ENSFALG00000007372	SF3B3	100	98.932	ENSCCAG00000017736	SF3B3	100	98.932	Cebus_capucinus
ENSFALG00000007372	SF3B3	100	98.932	ENSCATG00000036562	SF3B3	100	98.932	Cercocebus_atys
ENSFALG00000007372	SF3B3	100	98.932	ENSCLAG00000003921	SF3B3	100	98.932	Chinchilla_lanigera
ENSFALG00000007372	SF3B3	100	99.014	ENSCSAG00000004371	SF3B3	100	99.014	Chlorocebus_sabaeus
ENSFALG00000007372	SF3B3	90	92.212	ENSCHOG00000001878	SF3B3	90	92.212	Choloepus_hoffmanni
ENSFALG00000007372	SF3B3	100	98.110	ENSCPBG00000015853	SF3B3	100	98.110	Chrysemys_picta_bellii
ENSFALG00000007372	SF3B3	100	80.788	ENSCING00000001342	-	100	80.788	Ciona_intestinalis
ENSFALG00000007372	SF3B3	99	79.228	ENSCSAVG00000011454	-	100	79.228	Ciona_savignyi
ENSFALG00000007372	SF3B3	100	95.809	ENSCANG00000042920	SF3B3	100	95.809	Colobus_angolensis_palliatus
ENSFALG00000007372	SF3B3	100	98.850	ENSCGRG00001015908	Sf3b3	100	98.850	Cricetulus_griseus_chok1gshd
ENSFALG00000007372	SF3B3	100	98.850	ENSCGRG00000010180	Sf3b3	100	98.850	Cricetulus_griseus_crigri
ENSFALG00000007372	SF3B3	82	92.216	ENSCSEG00000014192	sf3b3	99	92.216	Cynoglossus_semilaevis
ENSFALG00000007372	SF3B3	100	92.440	ENSCVAG00000010459	sf3b3	100	92.440	Cyprinodon_variegatus
ENSFALG00000007372	SF3B3	100	93.016	ENSDARG00000103553	sf3b3	100	93.016	Danio_rerio
ENSFALG00000007372	SF3B3	85	98.939	ENSDNOG00000043626	SF3B3	100	98.939	Dasypus_novemcinctus
ENSFALG00000007372	SF3B3	100	98.932	ENSDORG00000014176	Sf3b3	100	98.932	Dipodomys_ordii
ENSFALG00000007372	SF3B3	100	75.224	FBgn0035162	Sf3b3	100	75.224	Drosophila_melanogaster
ENSFALG00000007372	SF3B3	84	99.156	ENSETEG00000002729	SF3B3	84	99.156	Echinops_telfairi
ENSFALG00000007372	SF3B3	100	87.921	ENSEBUG00000006117	sf3b3	100	87.921	Eptatretus_burgeri
ENSFALG00000007372	SF3B3	100	99.014	ENSEASG00005013376	SF3B3	100	99.014	Equus_asinus_asinus
ENSFALG00000007372	SF3B3	100	99.014	ENSECAG00000014053	SF3B3	100	99.014	Equus_caballus
ENSFALG00000007372	SF3B3	93	99.107	ENSEEUG00000015611	SF3B3	93	99.107	Erinaceus_europaeus
ENSFALG00000007372	SF3B3	100	90.984	ENSELUG00000015417	sf3b3	100	90.984	Esox_lucius
ENSFALG00000007372	SF3B3	100	99.014	ENSFCAG00000009487	SF3B3	100	99.014	Felis_catus
ENSFALG00000007372	SF3B3	100	99.014	ENSFDAG00000002608	SF3B3	100	99.014	Fukomys_damarensis
ENSFALG00000007372	SF3B3	100	92.851	ENSFHEG00000017824	sf3b3	100	92.851	Fundulus_heteroclitus
ENSFALG00000007372	SF3B3	100	89.163	ENSGMOG00000008139	sf3b3	100	89.163	Gadus_morhua
ENSFALG00000007372	SF3B3	100	99.507	ENSGALG00000002531	SF3B3	100	99.507	Gallus_gallus
ENSFALG00000007372	SF3B3	100	92.440	ENSGAFG00000015206	sf3b3	100	92.440	Gambusia_affinis
ENSFALG00000007372	SF3B3	100	92.775	ENSGACG00000002646	sf3b3	100	92.775	Gasterosteus_aculeatus
ENSFALG00000007372	SF3B3	96	98.292	ENSGAGG00000006746	SF3B3	97	98.292	Gopherus_agassizii
ENSFALG00000007372	SF3B3	100	98.932	ENSGGOG00000003246	SF3B3	100	98.932	Gorilla_gorilla
ENSFALG00000007372	SF3B3	92	85.446	ENSHBUG00000005960	sf3b3	100	86.607	Haplochromis_burtoni
ENSFALG00000007372	SF3B3	100	98.932	ENSHGLG00000010135	SF3B3	100	98.932	Heterocephalus_glaber_female
ENSFALG00000007372	SF3B3	100	96.918	ENSHGLG00100011148	SF3B3	100	96.918	Heterocephalus_glaber_male
ENSFALG00000007372	SF3B3	100	92.276	ENSHCOG00000011981	sf3b3	100	92.276	Hippocampus_comes
ENSFALG00000007372	SF3B3	100	92.851	ENSIPUG00000020435	sf3b3	100	92.851	Ictalurus_punctatus
ENSFALG00000007372	SF3B3	100	98.932	ENSSTOG00000007065	SF3B3	100	98.932	Ictidomys_tridecemlineatus
ENSFALG00000007372	SF3B3	100	98.932	ENSJJAG00000003948	Sf3b3	100	98.932	Jaculus_jaculus
ENSFALG00000007372	SF3B3	100	90.715	ENSKMAG00000004066	sf3b3	99	92.827	Kryptolebias_marmoratus
ENSFALG00000007372	SF3B3	100	92.687	ENSLBEG00000018302	sf3b3	100	92.687	Labrus_bergylta
ENSFALG00000007372	SF3B3	98	91.860	ENSLACG00000012501	SF3B3	99	91.860	Latimeria_chalumnae
ENSFALG00000007372	SF3B3	100	93.514	ENSLOCG00000007566	sf3b3	100	93.514	Lepisosteus_oculatus
ENSFALG00000007372	SF3B3	100	99.014	ENSLAFG00000012219	SF3B3	100	99.014	Loxodonta_africana
ENSFALG00000007372	SF3B3	100	98.932	ENSMFAG00000045487	SF3B3	100	98.932	Macaca_fascicularis
ENSFALG00000007372	SF3B3	100	98.932	ENSMMUG00000017812	SF3B3	100	98.932	Macaca_mulatta
ENSFALG00000007372	SF3B3	100	98.932	ENSMNEG00000033385	SF3B3	100	98.932	Macaca_nemestrina
ENSFALG00000007372	SF3B3	100	95.399	ENSMLEG00000043891	SF3B3	97	98.408	Mandrillus_leucophaeus
ENSFALG00000007372	SF3B3	100	93.262	ENSMAMG00000016837	sf3b3	100	93.262	Mastacembelus_armatus
ENSFALG00000007372	SF3B3	89	90.102	ENSMZEG00005026015	sf3b3	99	90.102	Maylandia_zebra
ENSFALG00000007372	SF3B3	100	92.851	ENSMZEG00005010836	sf3b3	100	92.851	Maylandia_zebra
ENSFALG00000007372	SF3B3	100	99.507	ENSMGAG00000001597	SF3B3	100	99.507	Meleagris_gallopavo
ENSFALG00000007372	SF3B3	81	82.011	ENSMAUG00000013618	Sf3b3	95	82.011	Mesocricetus_auratus
ENSFALG00000007372	SF3B3	100	97.785	ENSMICG00000001363	SF3B3	100	97.785	Microcebus_murinus
ENSFALG00000007372	SF3B3	100	98.850	ENSMOCG00000006108	Sf3b3	100	98.850	Microtus_ochrogaster
ENSFALG00000007372	SF3B3	89	90.379	ENSMMOG00000002598	sf3b3	97	90.379	Mola_mola
ENSFALG00000007372	SF3B3	100	94.581	ENSMODG00000014363	SF3B3	100	94.581	Monodelphis_domestica
ENSFALG00000007372	SF3B3	100	92.933	ENSMALG00000008014	sf3b3	100	92.933	Monopterus_albus
ENSFALG00000007372	SF3B3	100	98.767	MGP_CAROLIEiJ_G0031563	Sf3b3	100	98.767	Mus_caroli
ENSFALG00000007372	SF3B3	100	98.850	ENSMUSG00000033732	Sf3b3	100	98.850	Mus_musculus
ENSFALG00000007372	SF3B3	100	98.767	MGP_SPRETEiJ_G0032681	Sf3b3	100	98.767	Mus_spretus
ENSFALG00000007372	SF3B3	100	99.014	ENSMPUG00000010277	SF3B3	100	99.014	Mustela_putorius_furo
ENSFALG00000007372	SF3B3	100	98.767	ENSMLUG00000014607	SF3B3	100	98.767	Myotis_lucifugus
ENSFALG00000007372	SF3B3	100	98.932	ENSNGAG00000021903	Sf3b3	100	98.932	Nannospalax_galili
ENSFALG00000007372	SF3B3	83	91.667	ENSNBRG00000007197	sf3b3	99	91.667	Neolamprologus_brichardi
ENSFALG00000007372	SF3B3	100	97.455	ENSNLEG00000016127	SF3B3	100	97.455	Nomascus_leucogenys
ENSFALG00000007372	SF3B3	92	98.153	ENSMEUG00000004479	SF3B3	94	98.153	Notamacropus_eugenii
ENSFALG00000007372	SF3B3	98	95.641	ENSOPRG00000009847	SF3B3	100	95.641	Ochotona_princeps
ENSFALG00000007372	SF3B3	100	99.014	ENSODEG00000014154	SF3B3	100	99.014	Octodon_degus
ENSFALG00000007372	SF3B3	100	93.098	ENSONIG00000011198	sf3b3	100	93.098	Oreochromis_niloticus
ENSFALG00000007372	SF3B3	100	98.932	ENSOANG00000001161	-	100	98.932	Ornithorhynchus_anatinus
ENSFALG00000007372	SF3B3	100	96.631	ENSOCUG00000004139	SF3B3	100	96.631	Oryctolagus_cuniculus
ENSFALG00000007372	SF3B3	100	93.098	ENSORLG00000013472	sf3b3	100	93.098	Oryzias_latipes
ENSFALG00000007372	SF3B3	100	93.098	ENSORLG00020017473	sf3b3	100	93.098	Oryzias_latipes_hni
ENSFALG00000007372	SF3B3	100	93.098	ENSORLG00015007710	sf3b3	100	93.098	Oryzias_latipes_hsok
ENSFALG00000007372	SF3B3	100	92.933	ENSOMEG00000014483	sf3b3	100	92.933	Oryzias_melastigma
ENSFALG00000007372	SF3B3	100	98.689	ENSOGAG00000016051	SF3B3	100	98.689	Otolemur_garnettii
ENSFALG00000007372	SF3B3	100	98.770	ENSOARG00000004816	SF3B3	100	98.770	Ovis_aries
ENSFALG00000007372	SF3B3	100	98.932	ENSPPAG00000026807	SF3B3	100	98.932	Pan_paniscus
ENSFALG00000007372	SF3B3	100	99.014	ENSPPRG00000001686	SF3B3	100	99.014	Panthera_pardus
ENSFALG00000007372	SF3B3	89	96.044	ENSPTIG00000020382	SF3B3	100	96.044	Panthera_tigris_altaica
ENSFALG00000007372	SF3B3	100	98.932	ENSPTRG00000008308	SF3B3	100	98.932	Pan_troglodytes
ENSFALG00000007372	SF3B3	100	98.932	ENSPANG00000024075	SF3B3	100	98.932	Papio_anubis
ENSFALG00000007372	SF3B3	100	92.030	ENSPKIG00000002712	sf3b3	100	92.030	Paramormyrops_kingsleyae
ENSFALG00000007372	SF3B3	89	98.528	ENSPSIG00000002232	SF3B3	100	98.528	Pelodiscus_sinensis
ENSFALG00000007372	SF3B3	100	98.850	ENSPEMG00000008603	Sf3b3	100	98.850	Peromyscus_maniculatus_bairdii
ENSFALG00000007372	SF3B3	100	91.701	ENSPMAG00000001793	sf3b3	100	91.701	Petromyzon_marinus
ENSFALG00000007372	SF3B3	100	98.932	ENSPCIG00000014927	SF3B3	100	98.932	Phascolarctos_cinereus
ENSFALG00000007372	SF3B3	100	92.523	ENSPFOG00000015516	sf3b3	100	92.523	Poecilia_formosa
ENSFALG00000007372	SF3B3	100	92.523	ENSPLAG00000014330	sf3b3	100	92.523	Poecilia_latipinna
ENSFALG00000007372	SF3B3	100	92.605	ENSPMEG00000019856	sf3b3	100	92.605	Poecilia_mexicana
ENSFALG00000007372	SF3B3	82	92.749	ENSPREG00000019669	sf3b3	98	92.749	Poecilia_reticulata
ENSFALG00000007372	SF3B3	95	98.832	ENSPPYG00000007539	SF3B3	100	98.832	Pongo_abelii
ENSFALG00000007372	SF3B3	100	77.403	ENSPCAG00000002623	SF3B3	100	77.403	Procavia_capensis
ENSFALG00000007372	SF3B3	84	99.065	ENSPCOG00000026582	SF3B3	100	99.065	Propithecus_coquereli
ENSFALG00000007372	SF3B3	100	98.932	ENSPVAG00000000684	SF3B3	100	98.932	Pteropus_vampyrus
ENSFALG00000007372	SF3B3	100	92.933	ENSPNYG00000003528	sf3b3	100	92.933	Pundamilia_nyererei
ENSFALG00000007372	SF3B3	100	92.933	ENSPNAG00000015419	sf3b3	100	92.933	Pygocentrus_nattereri
ENSFALG00000007372	SF3B3	100	98.850	ENSRNOG00000017724	Sf3b3	100	98.850	Rattus_norvegicus
ENSFALG00000007372	SF3B3	100	98.932	ENSRBIG00000021904	SF3B3	100	98.932	Rhinopithecus_bieti
ENSFALG00000007372	SF3B3	100	98.932	ENSRROG00000045703	SF3B3	100	98.932	Rhinopithecus_roxellana
ENSFALG00000007372	SF3B3	100	98.932	ENSSBOG00000029156	SF3B3	100	98.932	Saimiri_boliviensis_boliviensis
ENSFALG00000007372	SF3B3	100	98.932	ENSSHAG00000000372	SF3B3	100	98.932	Sarcophilus_harrisii
ENSFALG00000007372	SF3B3	100	93.344	ENSSFOG00015012877	sf3b3	100	93.344	Scleropages_formosus
ENSFALG00000007372	SF3B3	100	92.605	ENSSMAG00000014386	sf3b3	100	92.605	Scophthalmus_maximus
ENSFALG00000007372	SF3B3	100	93.344	ENSSDUG00000021201	sf3b3	100	93.344	Seriola_dumerili
ENSFALG00000007372	SF3B3	100	93.262	ENSSLDG00000017532	sf3b3	100	93.262	Seriola_lalandi_dorsalis
ENSFALG00000007372	SF3B3	93	98.897	ENSSARG00000006917	SF3B3	93	98.897	Sorex_araneus
ENSFALG00000007372	SF3B3	100	98.767	ENSSPUG00000006253	SF3B3	100	98.767	Sphenodon_punctatus
ENSFALG00000007372	SF3B3	100	85.538	ENSSPAG00000003125	sf3b3	100	85.538	Stegastes_partitus
ENSFALG00000007372	SF3B3	100	99.014	ENSSSCG00000025323	SF3B3	100	99.014	Sus_scrofa
ENSFALG00000007372	SF3B3	100	99.672	ENSTGUG00000006082	SF3B3	100	99.672	Taeniopygia_guttata
ENSFALG00000007372	SF3B3	89	92.831	ENSTNIG00000004857	sf3b3	100	92.831	Tetraodon_nigroviridis
ENSFALG00000007372	SF3B3	93	83.979	ENSTBEG00000002946	SF3B3	100	83.979	Tupaia_belangeri
ENSFALG00000007372	SF3B3	100	98.192	ENSTTRG00000005855	SF3B3	100	98.192	Tursiops_truncatus
ENSFALG00000007372	SF3B3	100	99.014	ENSUAMG00000006780	SF3B3	100	99.014	Ursus_americanus
ENSFALG00000007372	SF3B3	100	99.014	ENSUMAG00000017757	SF3B3	100	99.014	Ursus_maritimus
ENSFALG00000007372	SF3B3	100	82.909	ENSVPAG00000003202	SF3B3	100	82.909	Vicugna_pacos
ENSFALG00000007372	SF3B3	100	98.932	ENSVVUG00000017922	SF3B3	100	98.932	Vulpes_vulpes
ENSFALG00000007372	SF3B3	100	96.220	ENSXETG00000032869	SF3B3	100	96.220	Xenopus_tropicalis
ENSFALG00000007372	SF3B3	77	93.949	ENSXCOG00000013628	sf3b3	97	93.949	Xiphophorus_couchianus
ENSFALG00000007372	SF3B3	100	92.523	ENSXMAG00000006334	sf3b3	99	93.598	Xiphophorus_maculatus