EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000007450 (Gene tree)
Gene ID: -
Gene Symbol: PATZ1
Alias: MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 18249 bases
Position: chrJH603179.1:3335541-3353789
Accession: 13071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000007777	zf-C2H2	PF00096.26	2e-28	1	5
ENSFALP00000007777	zf-C2H2	PF00096.26	2e-28	2	5
ENSFALP00000007777	zf-C2H2	PF00096.26	2e-28	3	5
ENSFALP00000007777	zf-C2H2	PF00096.26	2e-28	4	5
ENSFALP00000007777	zf-C2H2	PF00096.26	2e-28	5	5
ENSFALP00000007777	zf-met	PF12874.7	2.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000007809	PATZ1-201	1834	-	ENSFALP00000007777	585 (aa)	-	U3JYC3

Gene Model

Click here to download ENSFALG00000007450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000007450's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000007450	PATZ1	70	37.615	ENSFALG00000006322	ZBTB14	75	38.532
ENSFALG00000007450	PATZ1	59	38.393	ENSFALG00000004682	ZNF236	63	38.393
ENSFALG00000007450	PATZ1	68	35.928	ENSFALG00000008628	MYNN	76	35.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000007450	PATZ1	99	91.482	ENSG00000100105	PATZ1	86	91.525	Homo_sapiens
ENSFALG00000007450	PATZ1	100	53.834	ENSAPOG00000018447	patz1	90	60.083	Acanthochromis_polyacanthus
ENSFALG00000007450	PATZ1	99	91.141	ENSAMEG00000007074	PATZ1	86	92.034	Ailuropoda_melanoleuca
ENSFALG00000007450	PATZ1	100	57.190	ENSACIG00000016779	patz1	88	57.190	Amphilophus_citrinellus
ENSFALG00000007450	PATZ1	100	58.347	ENSAPEG00000013354	patz1	89	58.347	Amphiprion_percula
ENSFALG00000007450	PATZ1	100	58.086	ENSATEG00000011260	patz1	89	58.086	Anabas_testudineus
ENSFALG00000007450	PATZ1	99	98.273	ENSAPLG00000003934	PATZ1	99	98.273	Anas_platyrhynchos
ENSFALG00000007450	PATZ1	99	91.482	ENSANAG00000029603	PATZ1	86	91.525	Aotus_nancymaae
ENSFALG00000007450	PATZ1	97	62.212	ENSAMXG00000002273	patz1	88	52.227	Astyanax_mexicanus
ENSFALG00000007450	PATZ1	99	90.971	ENSBTAG00000005478	PATZ1	86	91.864	Bos_taurus
ENSFALG00000007450	PATZ1	99	91.482	ENSCJAG00000010978	PATZ1	86	91.525	Callithrix_jacchus
ENSFALG00000007450	PATZ1	99	91.141	ENSCAFG00000013087	PATZ1	86	92.034	Canis_familiaris
ENSFALG00000007450	PATZ1	99	90.630	ENSCHIG00000020203	PATZ1	86	91.525	Capra_hircus
ENSFALG00000007450	PATZ1	99	91.823	ENSTSYG00000033183	PATZ1	86	91.864	Carlito_syrichta
ENSFALG00000007450	PATZ1	99	91.482	ENSCCAG00000028772	PATZ1	86	91.525	Cebus_capucinus
ENSFALG00000007450	PATZ1	99	91.652	ENSCATG00000006101	PATZ1	86	91.695	Cercocebus_atys
ENSFALG00000007450	PATZ1	99	97.774	ENSCPBG00000011277	PATZ1	85	97.774	Chrysemys_picta_bellii
ENSFALG00000007450	PATZ1	99	91.652	ENSCANG00000024972	PATZ1	86	91.695	Colobus_angolensis_palliatus
ENSFALG00000007450	PATZ1	99	89.438	ENSCGRG00001004071	Patz1	86	89.492	Cricetulus_griseus_chok1gshd
ENSFALG00000007450	PATZ1	99	91.141	ENSCGRG00000004814	Patz1	92	91.186	Cricetulus_griseus_crigri
ENSFALG00000007450	PATZ1	100	54.781	ENSCSEG00000001385	patz1	89	54.400	Cynoglossus_semilaevis
ENSFALG00000007450	PATZ1	100	57.655	ENSCVAG00000007684	patz1	89	57.980	Cyprinodon_variegatus
ENSFALG00000007450	PATZ1	99	55.099	ENSDARG00000076584	patz1	88	55.099	Danio_rerio
ENSFALG00000007450	PATZ1	88	89.981	ENSDNOG00000003183	PATZ1	84	90.996	Dasypus_novemcinctus
ENSFALG00000007450	PATZ1	99	90.971	ENSDORG00000023834	Patz1	86	91.864	Dipodomys_ordii
ENSFALG00000007450	PATZ1	99	91.823	ENSECAG00000025030	PATZ1	86	91.864	Equus_caballus
ENSFALG00000007450	PATZ1	100	59.548	ENSELUG00000002333	patz1	90	59.548	Esox_lucius
ENSFALG00000007450	PATZ1	99	91.141	ENSFCAG00000030253	PATZ1	86	92.034	Felis_catus
ENSFALG00000007450	PATZ1	99	86.565	ENSFDAG00000005614	PATZ1	89	87.648	Fukomys_damarensis
ENSFALG00000007450	PATZ1	100	57.120	ENSFHEG00000014755	patz1	89	56.958	Fundulus_heteroclitus
ENSFALG00000007450	PATZ1	98	54.839	ENSGMOG00000001062	patz1	88	55.000	Gadus_morhua
ENSFALG00000007450	PATZ1	100	98.291	ENSGALG00000006934	PATZ1	85	98.291	Gallus_gallus
ENSFALG00000007450	PATZ1	100	53.994	ENSGAFG00000010053	patz1	88	53.514	Gambusia_affinis
ENSFALG00000007450	PATZ1	99	97.578	ENSGAGG00000003214	PATZ1	100	97.578	Gopherus_agassizii
ENSFALG00000007450	PATZ1	99	91.652	ENSGGOG00000017171	PATZ1	86	91.695	Gorilla_gorilla
ENSFALG00000007450	PATZ1	100	53.971	ENSHCOG00000017644	patz1	90	52.993	Hippocampus_comes
ENSFALG00000007450	PATZ1	99	53.560	ENSIPUG00000017653	patz1	87	53.560	Ictalurus_punctatus
ENSFALG00000007450	PATZ1	99	91.141	ENSSTOG00000020707	PATZ1	86	92.034	Ictidomys_tridecemlineatus
ENSFALG00000007450	PATZ1	99	90.136	ENSJJAG00000015259	Patz1	86	90.017	Jaculus_jaculus
ENSFALG00000007450	PATZ1	100	56.716	ENSKMAG00000008157	patz1	88	56.837	Kryptolebias_marmoratus
ENSFALG00000007450	PATZ1	99	90.971	ENSLAFG00000002317	PATZ1	87	91.993	Loxodonta_africana
ENSFALG00000007450	PATZ1	99	91.652	ENSMFAG00000040968	PATZ1	86	91.695	Macaca_fascicularis
ENSFALG00000007450	PATZ1	99	91.652	ENSMNEG00000037588	PATZ1	86	91.695	Macaca_nemestrina
ENSFALG00000007450	PATZ1	99	91.652	ENSMLEG00000030938	PATZ1	86	91.695	Mandrillus_leucophaeus
ENSFALG00000007450	PATZ1	100	56.672	ENSMAMG00000023652	patz1	90	56.672	Mastacembelus_armatus
ENSFALG00000007450	PATZ1	99	94.310	ENSMGAG00000008439	PATZ1	100	94.310	Meleagris_gallopavo
ENSFALG00000007450	PATZ1	99	91.312	ENSMAUG00000004129	Patz1	86	91.356	Mesocricetus_auratus
ENSFALG00000007450	PATZ1	99	91.823	ENSMICG00000005430	PATZ1	86	91.864	Microcebus_murinus
ENSFALG00000007450	PATZ1	99	91.312	ENSMOCG00000014488	Patz1	86	91.356	Microtus_ochrogaster
ENSFALG00000007450	PATZ1	77	54.348	ENSMMOG00000021679	patz1	57	54.348	Mola_mola
ENSFALG00000007450	PATZ1	100	56.486	ENSMALG00000021172	patz1	89	56.486	Monopterus_albus
ENSFALG00000007450	PATZ1	99	91.141	MGP_CAROLIEiJ_G0016007	Patz1	86	91.186	Mus_caroli
ENSFALG00000007450	PATZ1	99	91.312	ENSMUSG00000020453	Patz1	86	91.356	Mus_musculus
ENSFALG00000007450	PATZ1	99	91.312	MGP_PahariEiJ_G0016884	Patz1	86	91.356	Mus_pahari
ENSFALG00000007450	PATZ1	99	91.312	MGP_SPRETEiJ_G0016846	Patz1	86	91.356	Mus_spretus
ENSFALG00000007450	PATZ1	99	90.971	ENSMLUG00000009942	PATZ1	86	91.864	Myotis_lucifugus
ENSFALG00000007450	PATZ1	99	91.482	ENSNGAG00000010268	Patz1	86	91.525	Nannospalax_galili
ENSFALG00000007450	PATZ1	100	58.211	ENSNBRG00000016032	patz1	89	58.211	Neolamprologus_brichardi
ENSFALG00000007450	PATZ1	79	92.688	ENSMEUG00000016293	PATZ1	100	92.688	Notamacropus_eugenii
ENSFALG00000007450	PATZ1	99	91.482	ENSODEG00000003589	PATZ1	86	91.356	Octodon_degus
ENSFALG00000007450	PATZ1	100	54.358	ENSONIG00000004248	patz1	89	54.358	Oreochromis_niloticus
ENSFALG00000007450	PATZ1	99	92.517	ENSOANG00000014654	PATZ1	86	92.555	Ornithorhynchus_anatinus
ENSFALG00000007450	PATZ1	100	55.677	ENSORLG00020010937	patz1	89	55.677	Oryzias_latipes_hni
ENSFALG00000007450	PATZ1	100	55.607	ENSORLG00015007396	patz1	89	55.607	Oryzias_latipes_hsok
ENSFALG00000007450	PATZ1	100	53.365	ENSOMEG00000006636	patz1	89	59.653	Oryzias_melastigma
ENSFALG00000007450	PATZ1	99	91.823	ENSOGAG00000027905	PATZ1	86	91.864	Otolemur_garnettii
ENSFALG00000007450	PATZ1	99	91.652	ENSPPAG00000033227	PATZ1	86	91.695	Pan_paniscus
ENSFALG00000007450	PATZ1	99	91.141	ENSPPRG00000001573	PATZ1	86	92.034	Panthera_pardus
ENSFALG00000007450	PATZ1	99	91.141	ENSPTIG00000007937	PATZ1	90	92.034	Panthera_tigris_altaica
ENSFALG00000007450	PATZ1	99	91.652	ENSPTRG00000014268	PATZ1	86	91.695	Pan_troglodytes
ENSFALG00000007450	PATZ1	99	91.652	ENSPANG00000006821	PATZ1	86	91.695	Papio_anubis
ENSFALG00000007450	PATZ1	100	62.439	ENSPKIG00000019584	patz1	91	61.789	Paramormyrops_kingsleyae
ENSFALG00000007450	PATZ1	70	89.951	ENSPSIG00000016553	-	91	89.951	Pelodiscus_sinensis
ENSFALG00000007450	PATZ1	68	98.232	ENSPSIG00000011562	-	100	98.232	Pelodiscus_sinensis
ENSFALG00000007450	PATZ1	100	57.541	ENSPMGG00000010196	patz1	89	57.541	Periophthalmus_magnuspinnatus
ENSFALG00000007450	PATZ1	99	91.482	ENSPEMG00000005321	Patz1	86	91.356	Peromyscus_maniculatus_bairdii
ENSFALG00000007450	PATZ1	99	57.541	ENSPLAG00000010425	patz1	100	57.143	Poecilia_latipinna
ENSFALG00000007450	PATZ1	100	53.907	ENSPMEG00000000255	patz1	88	53.514	Poecilia_mexicana
ENSFALG00000007450	PATZ1	100	57.006	ENSPREG00000002440	patz1	89	56.619	Poecilia_reticulata
ENSFALG00000007450	PATZ1	99	91.482	ENSPPYG00000011732	PATZ1	86	91.525	Pongo_abelii
ENSFALG00000007450	PATZ1	99	91.652	ENSPCOG00000019729	PATZ1	86	91.695	Propithecus_coquereli
ENSFALG00000007450	PATZ1	99	91.141	ENSPVAG00000001749	PATZ1	86	92.034	Pteropus_vampyrus
ENSFALG00000007450	PATZ1	100	59.157	ENSPNYG00000013542	patz1	89	59.157	Pundamilia_nyererei
ENSFALG00000007450	PATZ1	98	58.007	ENSPNAG00000017222	patz1	99	58.007	Pygocentrus_nattereri
ENSFALG00000007450	PATZ1	99	91.652	ENSRBIG00000044231	PATZ1	86	91.695	Rhinopithecus_bieti
ENSFALG00000007450	PATZ1	99	91.652	ENSRROG00000037155	PATZ1	86	91.695	Rhinopithecus_roxellana
ENSFALG00000007450	PATZ1	99	91.482	ENSSBOG00000003894	PATZ1	86	91.525	Saimiri_boliviensis_boliviensis
ENSFALG00000007450	PATZ1	69	88.889	ENSSFOG00015013244	patz1	68	88.889	Scleropages_formosus
ENSFALG00000007450	PATZ1	100	95.918	ENSSPUG00000015298	PATZ1	84	95.918	Sphenodon_punctatus
ENSFALG00000007450	PATZ1	99	90.566	ENSSSCG00000010027	PATZ1	100	91.595	Sus_scrofa
ENSFALG00000007450	PATZ1	99	57.711	ENSTRUG00000015366	patz1	89	57.711	Takifugu_rubripes
ENSFALG00000007450	PATZ1	99	91.141	ENSTTRG00000010279	PATZ1	86	92.034	Tursiops_truncatus
ENSFALG00000007450	PATZ1	99	83.816	ENSUAMG00000015014	PATZ1	85	84.746	Ursus_americanus
ENSFALG00000007450	PATZ1	99	75.427	ENSXETG00000004190	patz1	88	75.427	Xenopus_tropicalis
ENSFALG00000007450	PATZ1	100	53.994	ENSXMAG00000015531	patz1	88	53.514	Xiphophorus_maculatus