EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000007797 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 8512 bases
Position: chrJH603291.1:1454365-1462876
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000008129	zf-U11-48K	PF05253.12	8.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000008162	SNRNP48-201	1472	-	ENSFALP00000008129	313 (aa)	-	U3JZC5

Gene Model

Click here to download ENSFALG00000007797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000007797's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000007797	SNRNP48	92	65.979	ENSG00000168566	SNRNP48	83	66.438	Homo_sapiens
ENSFALG00000007797	SNRNP48	73	57.265	ENSAPOG00000021430	snrnp48	69	56.667	Acanthochromis_polyacanthus
ENSFALG00000007797	SNRNP48	93	63.014	ENSAMEG00000017349	SNRNP48	84	63.014	Ailuropoda_melanoleuca
ENSFALG00000007797	SNRNP48	85	50.000	ENSACIG00000002032	snrnp48	68	52.966	Amphilophus_citrinellus
ENSFALG00000007797	SNRNP48	73	56.466	ENSAOCG00000010562	snrnp48	80	49.320	Amphiprion_ocellaris
ENSFALG00000007797	SNRNP48	73	56.466	ENSAPEG00000003231	snrnp48	80	49.320	Amphiprion_percula
ENSFALG00000007797	SNRNP48	64	58.911	ENSATEG00000020210	snrnp48	71	56.017	Anabas_testudineus
ENSFALG00000007797	SNRNP48	97	68.608	ENSACAG00000002811	SNRNP48	94	67.314	Anolis_carolinensis
ENSFALG00000007797	SNRNP48	92	66.090	ENSANAG00000033538	SNRNP48	83	66.096	Aotus_nancymaae
ENSFALG00000007797	SNRNP48	90	49.129	ENSAMXG00000015309	snrnp48	78	51.351	Astyanax_mexicanus
ENSFALG00000007797	SNRNP48	92	66.782	ENSBTAG00000001123	SNRNP48	85	65.436	Bos_taurus
ENSFALG00000007797	SNRNP48	92	66.323	ENSCJAG00000021330	SNRNP48	83	66.781	Callithrix_jacchus
ENSFALG00000007797	SNRNP48	93	65.411	ENSCAFG00000009574	SNRNP48	70	65.411	Canis_familiaris
ENSFALG00000007797	SNRNP48	93	65.411	ENSCAFG00020013203	SNRNP48	83	65.411	Canis_lupus_dingo
ENSFALG00000007797	SNRNP48	92	65.744	ENSCHIG00000015216	SNRNP48	85	64.430	Capra_hircus
ENSFALG00000007797	SNRNP48	93	65.862	ENSTSYG00000000698	SNRNP48	83	65.753	Carlito_syrichta
ENSFALG00000007797	SNRNP48	93	67.466	ENSCAPG00000006768	SNRNP48	92	67.466	Cavia_aperea
ENSFALG00000007797	SNRNP48	92	67.128	ENSCPOG00000007910	SNRNP48	83	67.123	Cavia_porcellus
ENSFALG00000007797	SNRNP48	92	65.636	ENSCCAG00000035652	SNRNP48	83	65.646	Cebus_capucinus
ENSFALG00000007797	SNRNP48	92	66.436	ENSCATG00000033947	SNRNP48	83	66.438	Cercocebus_atys
ENSFALG00000007797	SNRNP48	92	66.782	ENSCLAG00000003765	SNRNP48	83	66.781	Chinchilla_lanigera
ENSFALG00000007797	SNRNP48	93	66.327	ENSCSAG00000007409	SNRNP48	83	66.781	Chlorocebus_sabaeus
ENSFALG00000007797	SNRNP48	98	76.358	ENSCPBG00000019146	SNRNP48	94	75.079	Chrysemys_picta_bellii
ENSFALG00000007797	SNRNP48	92	30.333	ENSCING00000004121	-	67	33.040	Ciona_intestinalis
ENSFALG00000007797	SNRNP48	92	65.979	ENSCANG00000030017	SNRNP48	83	66.438	Colobus_angolensis_palliatus
ENSFALG00000007797	SNRNP48	93	64.384	ENSCGRG00001001076	-	83	63.699	Cricetulus_griseus_chok1gshd
ENSFALG00000007797	SNRNP48	93	53.265	ENSCGRG00001008805	-	82	53.265	Cricetulus_griseus_chok1gshd
ENSFALG00000007797	SNRNP48	93	64.384	ENSCGRG00000007781	Snrnp48	83	63.699	Cricetulus_griseus_crigri
ENSFALG00000007797	SNRNP48	68	53.488	ENSCSEG00000000722	snrnp48	66	52.340	Cynoglossus_semilaevis
ENSFALG00000007797	SNRNP48	86	51.838	ENSCVAG00000019829	snrnp48	64	52.174	Cyprinodon_variegatus
ENSFALG00000007797	SNRNP48	79	51.613	ENSDARG00000039989	snrnp48	74	50.973	Danio_rerio
ENSFALG00000007797	SNRNP48	93	64.626	ENSDNOG00000014978	SNRNP48	83	64.626	Dasypus_novemcinctus
ENSFALG00000007797	SNRNP48	93	63.793	ENSDORG00000015140	Snrnp48	83	63.793	Dipodomys_ordii
ENSFALG00000007797	SNRNP48	93	64.384	ENSEASG00005012021	SNRNP48	83	64.384	Equus_asinus_asinus
ENSFALG00000007797	SNRNP48	93	64.726	ENSECAG00000026937	SNRNP48	83	64.726	Equus_caballus
ENSFALG00000007797	SNRNP48	98	45.511	ENSEEUG00000015437	SNRNP48	83	46.599	Erinaceus_europaeus
ENSFALG00000007797	SNRNP48	91	50.667	ENSELUG00000009766	snrnp48	82	51.171	Esox_lucius
ENSFALG00000007797	SNRNP48	93	65.411	ENSFCAG00000018853	SNRNP48	83	65.411	Felis_catus
ENSFALG00000007797	SNRNP48	93	65.068	ENSFDAG00000009231	SNRNP48	86	63.696	Fukomys_damarensis
ENSFALG00000007797	SNRNP48	64	58.621	ENSFHEG00000014647	snrnp48	82	54.812	Fundulus_heteroclitus
ENSFALG00000007797	SNRNP48	65	56.311	ENSGMOG00000018599	-	86	46.863	Gadus_morhua
ENSFALG00000007797	SNRNP48	89	91.039	ENSGALG00000013005	SNRNP48	86	93.359	Gallus_gallus
ENSFALG00000007797	SNRNP48	72	56.332	ENSGAFG00000021639	snrnp48	68	54.583	Gambusia_affinis
ENSFALG00000007797	SNRNP48	64	57.426	ENSGACG00000017756	-	73	53.846	Gasterosteus_aculeatus
ENSFALG00000007797	SNRNP48	93	78.188	ENSGAGG00000000865	SNRNP48	97	78.188	Gopherus_agassizii
ENSFALG00000007797	SNRNP48	92	65.979	ENSGGOG00000013220	SNRNP48	83	66.438	Gorilla_gorilla
ENSFALG00000007797	SNRNP48	64	59.606	ENSHBUG00000017066	snrnp48	68	56.485	Haplochromis_burtoni
ENSFALG00000007797	SNRNP48	93	65.411	ENSHGLG00000015241	SNRNP48	86	64.026	Heterocephalus_glaber_female
ENSFALG00000007797	SNRNP48	93	65.411	ENSHGLG00100010027	SNRNP48	86	64.026	Heterocephalus_glaber_male
ENSFALG00000007797	SNRNP48	64	56.650	ENSHCOG00000014066	snrnp48	81	48.649	Hippocampus_comes
ENSFALG00000007797	SNRNP48	93	66.096	ENSSTOG00000014635	SNRNP48	83	66.096	Ictidomys_tridecemlineatus
ENSFALG00000007797	SNRNP48	93	62.671	ENSJJAG00000011495	Snrnp48	83	62.671	Jaculus_jaculus
ENSFALG00000007797	SNRNP48	86	49.265	ENSKMAG00000016514	snrnp48	69	52.941	Kryptolebias_marmoratus
ENSFALG00000007797	SNRNP48	71	55.556	ENSLBEG00000026249	snrnp48	69	54.583	Labrus_bergylta
ENSFALG00000007797	SNRNP48	98	55.692	ENSLACG00000003958	SNRNP48	94	55.385	Latimeria_chalumnae
ENSFALG00000007797	SNRNP48	81	57.087	ENSLOCG00000004187	snrnp48	84	54.817	Lepisosteus_oculatus
ENSFALG00000007797	SNRNP48	92	64.360	ENSLAFG00000011152	SNRNP48	83	64.384	Loxodonta_africana
ENSFALG00000007797	SNRNP48	92	66.323	ENSMFAG00000045216	SNRNP48	83	66.781	Macaca_fascicularis
ENSFALG00000007797	SNRNP48	92	66.323	ENSMMUG00000014785	SNRNP48	83	66.781	Macaca_mulatta
ENSFALG00000007797	SNRNP48	92	66.323	ENSMNEG00000042269	SNRNP48	83	66.781	Macaca_nemestrina
ENSFALG00000007797	SNRNP48	92	66.323	ENSMLEG00000034004	SNRNP48	83	66.781	Mandrillus_leucophaeus
ENSFALG00000007797	SNRNP48	65	56.098	ENSMAMG00000018673	snrnp48	60	53.782	Mastacembelus_armatus
ENSFALG00000007797	SNRNP48	92	90.034	ENSMGAG00000006037	SNRNP48	99	90.034	Meleagris_gallopavo
ENSFALG00000007797	SNRNP48	93	64.384	ENSMAUG00000011944	Snrnp48	83	63.699	Mesocricetus_auratus
ENSFALG00000007797	SNRNP48	92	65.398	ENSMICG00000012497	SNRNP48	83	65.411	Microcebus_murinus
ENSFALG00000007797	SNRNP48	93	64.384	ENSMOCG00000015555	Snrnp48	83	63.699	Microtus_ochrogaster
ENSFALG00000007797	SNRNP48	58	56.989	ENSMMOG00000003072	-	58	56.989	Mola_mola
ENSFALG00000007797	SNRNP48	93	71.769	ENSMODG00000009996	SNRNP48	79	71.769	Monodelphis_domestica
ENSFALG00000007797	SNRNP48	65	57.767	ENSMALG00000005725	snrnp48	81	50.515	Monopterus_albus
ENSFALG00000007797	SNRNP48	93	63.699	MGP_CAROLIEiJ_G0018441	Snrnp48	83	63.014	Mus_caroli
ENSFALG00000007797	SNRNP48	93	63.014	ENSMUSG00000021431	Snrnp48	83	62.329	Mus_musculus
ENSFALG00000007797	SNRNP48	93	64.384	MGP_PahariEiJ_G0019509	Snrnp48	83	63.699	Mus_pahari
ENSFALG00000007797	SNRNP48	93	63.356	MGP_SPRETEiJ_G0019321	Snrnp48	83	62.671	Mus_spretus
ENSFALG00000007797	SNRNP48	93	64.726	ENSNGAG00000004849	Snrnp48	83	64.726	Nannospalax_galili
ENSFALG00000007797	SNRNP48	86	51.825	ENSNBRG00000012127	snrnp48	68	56.485	Neolamprologus_brichardi
ENSFALG00000007797	SNRNP48	92	66.436	ENSNLEG00000011667	SNRNP48	83	66.438	Nomascus_leucogenys
ENSFALG00000007797	SNRNP48	89	63.082	ENSOPRG00000015471	SNRNP48	84	58.904	Ochotona_princeps
ENSFALG00000007797	SNRNP48	90	49.301	ENSONIG00000001520	snrnp48	68	56.067	Oreochromis_niloticus
ENSFALG00000007797	SNRNP48	82	69.261	ENSOCUG00000005168	SNRNP48	80	69.170	Oryctolagus_cuniculus
ENSFALG00000007797	SNRNP48	76	56.017	ENSORLG00000015654	snrnp48	68	56.667	Oryzias_latipes
ENSFALG00000007797	SNRNP48	76	55.000	ENSORLG00020015976	snrnp48	69	50.000	Oryzias_latipes_hni
ENSFALG00000007797	SNRNP48	76	55.833	ENSORLG00015022379	snrnp48	58	57.261	Oryzias_latipes_hsok
ENSFALG00000007797	SNRNP48	76	58.091	ENSOMEG00000022007	snrnp48	80	51.351	Oryzias_melastigma
ENSFALG00000007797	SNRNP48	88	63.768	ENSOGAG00000005275	SNRNP48	82	61.301	Otolemur_garnettii
ENSFALG00000007797	SNRNP48	93	65.411	ENSOARG00000017319	SNRNP48	99	65.411	Ovis_aries
ENSFALG00000007797	SNRNP48	92	66.436	ENSPPAG00000032873	SNRNP48	83	66.438	Pan_paniscus
ENSFALG00000007797	SNRNP48	93	65.411	ENSPPRG00000004283	SNRNP48	83	65.411	Panthera_pardus
ENSFALG00000007797	SNRNP48	93	65.411	ENSPTIG00000013502	SNRNP48	98	65.411	Panthera_tigris_altaica
ENSFALG00000007797	SNRNP48	92	66.436	ENSPTRG00000017703	SNRNP48	83	66.438	Pan_troglodytes
ENSFALG00000007797	SNRNP48	92	66.323	ENSPANG00000000771	SNRNP48	83	66.781	Papio_anubis
ENSFALG00000007797	SNRNP48	88	51.748	ENSPKIG00000013703	snrnp48	53	54.365	Paramormyrops_kingsleyae
ENSFALG00000007797	SNRNP48	96	72.611	ENSPSIG00000002213	SNRNP48	99	73.885	Pelodiscus_sinensis
ENSFALG00000007797	SNRNP48	66	54.286	ENSPMGG00000008120	snrnp48	73	54.286	Periophthalmus_magnuspinnatus
ENSFALG00000007797	SNRNP48	93	64.726	ENSPEMG00000008872	Snrnp48	83	64.041	Peromyscus_maniculatus_bairdii
ENSFALG00000007797	SNRNP48	72	55.459	ENSPFOG00000003578	snrnp48	68	53.750	Poecilia_formosa
ENSFALG00000007797	SNRNP48	58	56.757	ENSPLAG00000002290	snrnp48	63	56.757	Poecilia_latipinna
ENSFALG00000007797	SNRNP48	72	56.332	ENSPMEG00000018033	snrnp48	68	54.583	Poecilia_mexicana
ENSFALG00000007797	SNRNP48	64	58.911	ENSPREG00000018541	snrnp48	68	54.583	Poecilia_reticulata
ENSFALG00000007797	SNRNP48	92	65.398	ENSPPYG00000016209	SNRNP48	83	65.411	Pongo_abelii
ENSFALG00000007797	SNRNP48	65	53.695	ENSPCAG00000011991	SNRNP48	77	53.883	Procavia_capensis
ENSFALG00000007797	SNRNP48	92	64.828	ENSPVAG00000002854	SNRNP48	83	64.846	Pteropus_vampyrus
ENSFALG00000007797	SNRNP48	88	45.357	ENSPNYG00000015399	snrnp48	75	56.485	Pundamilia_nyererei
ENSFALG00000007797	SNRNP48	93	65.068	ENSRNOG00000013756	Snrnp48	83	64.384	Rattus_norvegicus
ENSFALG00000007797	SNRNP48	85	67.790	ENSRBIG00000043856	SNRNP48	78	69.291	Rhinopithecus_bieti
ENSFALG00000007797	SNRNP48	92	65.979	ENSRROG00000043229	SNRNP48	83	66.438	Rhinopithecus_roxellana
ENSFALG00000007797	SNRNP48	92	66.436	ENSSBOG00000019486	SNRNP48	83	66.438	Saimiri_boliviensis_boliviensis
ENSFALG00000007797	SNRNP48	94	71.864	ENSSHAG00000014483	SNRNP48	84	71.864	Sarcophilus_harrisii
ENSFALG00000007797	SNRNP48	64	59.606	ENSSFOG00015006610	snrnp48	59	55.253	Scleropages_formosus
ENSFALG00000007797	SNRNP48	85	53.532	ENSSDUG00000014953	snrnp48	69	57.143	Seriola_dumerili
ENSFALG00000007797	SNRNP48	85	53.532	ENSSLDG00000005989	snrnp48	68	57.143	Seriola_lalandi_dorsalis
ENSFALG00000007797	SNRNP48	100	69.375	ENSSPUG00000006257	SNRNP48	91	69.375	Sphenodon_punctatus
ENSFALG00000007797	SNRNP48	73	55.603	ENSSPAG00000006454	snrnp48	69	55.042	Stegastes_partitus
ENSFALG00000007797	SNRNP48	95	93.243	ENSTGUG00000007575	SNRNP48	100	90.415	Taeniopygia_guttata
ENSFALG00000007797	SNRNP48	64	55.941	ENSTRUG00000007031	snrnp48	68	53.191	Takifugu_rubripes
ENSFALG00000007797	SNRNP48	92	47.987	ENSTNIG00000012977	-	72	52.083	Tetraodon_nigroviridis
ENSFALG00000007797	SNRNP48	66	69.903	ENSTBEG00000015620	SNRNP48	61	69.903	Tupaia_belangeri
ENSFALG00000007797	SNRNP48	92	66.090	ENSTTRG00000016715	SNRNP48	83	65.753	Tursiops_truncatus
ENSFALG00000007797	SNRNP48	93	63.946	ENSUAMG00000003690	SNRNP48	84	64.384	Ursus_americanus
ENSFALG00000007797	SNRNP48	93	64.384	ENSVPAG00000003557	SNRNP48	99	64.384	Vicugna_pacos
ENSFALG00000007797	SNRNP48	93	64.966	ENSVVUG00000004996	SNRNP48	83	64.966	Vulpes_vulpes
ENSFALG00000007797	SNRNP48	84	56.061	ENSXETG00000020447	snrnp48	88	52.475	Xenopus_tropicalis
ENSFALG00000007797	SNRNP48	58	59.140	ENSXCOG00000004478	snrnp48	56	59.140	Xiphophorus_couchianus
ENSFALG00000007797	SNRNP48	65	60.000	ENSXMAG00000013595	snrnp48	68	55.417	Xiphophorus_maculatus