EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000007821 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 15251 bases
Position: chrJH603268.1:3192873-3208123
Accession: 101820949
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000008158	DUF1604	PF07713.13	2.1e-35	1	1
ENSFALP00000008158	G-patch	PF01585.23	4.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000008191	GPATCH1-201	3136	XM_005052762	ENSFALP00000008158	945 (aa)	XP_005052819	U3JZF4

Gene Model

Click here to download ENSFALG00000007821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000007821's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000007821	GPATCH1	89	62.985	ENSG00000076650	GPATCH1	99	62.869	Homo_sapiens
ENSFALG00000007821	GPATCH1	89	63.201	ENSAMEG00000015575	GPATCH1	99	62.920	Ailuropoda_melanoleuca
ENSFALG00000007821	GPATCH1	80	64.835	ENSAOCG00000006668	gpatch1	94	49.892	Amphiprion_ocellaris
ENSFALG00000007821	GPATCH1	81	52.956	ENSAPEG00000000026	gpatch1	94	49.726	Amphiprion_percula
ENSFALG00000007821	GPATCH1	89	49.376	ENSATEG00000014494	gpatch1	90	50.170	Anabas_testudineus
ENSFALG00000007821	GPATCH1	91	77.839	ENSAPLG00000007584	GPATCH1	98	77.459	Anas_platyrhynchos
ENSFALG00000007821	GPATCH1	89	62.924	ENSANAG00000027002	GPATCH1	99	62.671	Aotus_nancymaae
ENSFALG00000007821	GPATCH1	81	52.579	ENSACLG00000024740	gpatch1	79	53.082	Astatotilapia_calliptera
ENSFALG00000007821	GPATCH1	94	49.789	ENSAMXG00000020177	gpatch1	98	50.746	Astyanax_mexicanus
ENSFALG00000007821	GPATCH1	89	64.637	ENSBTAG00000000721	GPATCH1	99	63.368	Bos_taurus
ENSFALG00000007821	GPATCH1	68	31.175	WBGene00011109	R07E5.1	68	30.758	Caenorhabditis_elegans
ENSFALG00000007821	GPATCH1	89	62.471	ENSCJAG00000000684	GPATCH1	99	62.264	Callithrix_jacchus
ENSFALG00000007821	GPATCH1	89	62.881	ENSCAFG00000007457	GPATCH1	83	62.000	Canis_familiaris
ENSFALG00000007821	GPATCH1	89	62.881	ENSCAFG00020019731	GPATCH1	92	61.538	Canis_lupus_dingo
ENSFALG00000007821	GPATCH1	89	64.505	ENSCHIG00000019626	GPATCH1	99	63.474	Capra_hircus
ENSFALG00000007821	GPATCH1	86	59.662	ENSCAPG00000008827	GPATCH1	99	58.565	Cavia_aperea
ENSFALG00000007821	GPATCH1	89	62.574	ENSCPOG00000024477	GPATCH1	99	61.905	Cavia_porcellus
ENSFALG00000007821	GPATCH1	89	61.916	ENSCCAG00000024676	GPATCH1	99	62.250	Cebus_capucinus
ENSFALG00000007821	GPATCH1	89	63.561	ENSCATG00000043637	GPATCH1	99	62.896	Cercocebus_atys
ENSFALG00000007821	GPATCH1	90	61.366	ENSCLAG00000003395	-	100	60.521	Chinchilla_lanigera
ENSFALG00000007821	GPATCH1	89	62.660	ENSCSAG00000004743	GPATCH1	99	61.175	Chlorocebus_sabaeus
ENSFALG00000007821	GPATCH1	82	56.122	ENSCHOG00000012865	GPATCH1	89	56.194	Choloepus_hoffmanni
ENSFALG00000007821	GPATCH1	83	73.214	ENSCPBG00000000666	GPATCH1	98	73.214	Chrysemys_picta_bellii
ENSFALG00000007821	GPATCH1	68	37.481	ENSCING00000012518	-	84	34.403	Ciona_intestinalis
ENSFALG00000007821	GPATCH1	81	62.826	ENSCANG00000012540	GPATCH1	99	59.838	Colobus_angolensis_palliatus
ENSFALG00000007821	GPATCH1	87	61.768	ENSCGRG00001016736	Gpatch1	99	61.147	Cricetulus_griseus_chok1gshd
ENSFALG00000007821	GPATCH1	78	54.101	ENSCGRG00000005069	Gpatch1	78	52.972	Cricetulus_griseus_crigri
ENSFALG00000007821	GPATCH1	85	49.443	ENSCSEG00000019456	-	76	71.429	Cynoglossus_semilaevis
ENSFALG00000007821	GPATCH1	89	51.211	ENSDARG00000033418	gpatch1	93	50.851	Danio_rerio
ENSFALG00000007821	GPATCH1	89	63.127	ENSDNOG00000005291	GPATCH1	96	61.599	Dasypus_novemcinctus
ENSFALG00000007821	GPATCH1	90	59.602	ENSDORG00000012546	Gpatch1	96	57.627	Dipodomys_ordii
ENSFALG00000007821	GPATCH1	82	32.843	FBgn0036386	CG8833	66	35.303	Drosophila_melanogaster
ENSFALG00000007821	GPATCH1	99	57.611	ENSETEG00000003626	GPATCH1	100	57.717	Echinops_telfairi
ENSFALG00000007821	GPATCH1	89	36.610	ENSEBUG00000011286	gpatch1	91	36.271	Eptatretus_burgeri
ENSFALG00000007821	GPATCH1	91	61.986	ENSEASG00005021162	GPATCH1	95	63.389	Equus_asinus_asinus
ENSFALG00000007821	GPATCH1	89	64.403	ENSECAG00000022743	GPATCH1	89	62.373	Equus_caballus
ENSFALG00000007821	GPATCH1	71	66.667	ENSEEUG00000012925	GPATCH1	70	66.162	Erinaceus_europaeus
ENSFALG00000007821	GPATCH1	99	47.639	ENSELUG00000018195	gpatch1	92	48.789	Esox_lucius
ENSFALG00000007821	GPATCH1	89	62.146	ENSFCAG00000014917	GPATCH1	99	62.262	Felis_catus
ENSFALG00000007821	GPATCH1	87	63.801	ENSFDAG00000003871	GPATCH1	100	60.818	Fukomys_damarensis
ENSFALG00000007821	GPATCH1	93	81.911	ENSGALG00000004839	GPATCH1	96	81.870	Gallus_gallus
ENSFALG00000007821	GPATCH1	89	48.829	ENSGACG00000017544	gpatch1	93	48.041	Gasterosteus_aculeatus
ENSFALG00000007821	GPATCH1	99	70.402	ENSGAGG00000010067	GPATCH1	99	69.133	Gopherus_agassizii
ENSFALG00000007821	GPATCH1	87	62.289	ENSGGOG00000010862	GPATCH1	99	62.311	Gorilla_gorilla
ENSFALG00000007821	GPATCH1	81	52.904	ENSHBUG00000023462	gpatch1	90	51.973	Haplochromis_burtoni
ENSFALG00000007821	GPATCH1	89	63.015	ENSHGLG00000009334	GPATCH1	99	61.910	Heterocephalus_glaber_female
ENSFALG00000007821	GPATCH1	89	63.133	ENSHGLG00100018074	GPATCH1	99	62.015	Heterocephalus_glaber_male
ENSFALG00000007821	GPATCH1	94	52.151	ENSIPUG00000014977	gpatch1	92	51.354	Ictalurus_punctatus
ENSFALG00000007821	GPATCH1	89	64.169	ENSSTOG00000003720	GPATCH1	99	62.986	Ictidomys_tridecemlineatus
ENSFALG00000007821	GPATCH1	89	61.556	ENSJJAG00000023765	Gpatch1	99	61.635	Jaculus_jaculus
ENSFALG00000007821	GPATCH1	89	50.978	ENSKMAG00000017950	gpatch1	89	51.147	Kryptolebias_marmoratus
ENSFALG00000007821	GPATCH1	81	49.565	ENSLBEG00000026527	gpatch1	89	49.664	Labrus_bergylta
ENSFALG00000007821	GPATCH1	87	60.689	ENSLACG00000008130	GPATCH1	92	59.698	Latimeria_chalumnae
ENSFALG00000007821	GPATCH1	99	51.806	ENSLOCG00000001800	gpatch1	92	51.934	Lepisosteus_oculatus
ENSFALG00000007821	GPATCH1	89	63.251	ENSLAFG00000013589	GPATCH1	99	62.105	Loxodonta_africana
ENSFALG00000007821	GPATCH1	89	63.477	ENSMFAG00000034418	GPATCH1	95	62.734	Macaca_fascicularis
ENSFALG00000007821	GPATCH1	89	63.636	ENSMMUG00000011790	GPATCH1	99	62.159	Macaca_mulatta
ENSFALG00000007821	GPATCH1	89	63.201	ENSMNEG00000045084	GPATCH1	99	61.704	Macaca_nemestrina
ENSFALG00000007821	GPATCH1	89	53.892	ENSMLEG00000043840	GPATCH1	99	54.123	Mandrillus_leucophaeus
ENSFALG00000007821	GPATCH1	81	52.579	ENSMZEG00005001926	gpatch1	80	53.082	Maylandia_zebra
ENSFALG00000007821	GPATCH1	89	82.742	ENSMGAG00000005775	GPATCH1	99	81.090	Meleagris_gallopavo
ENSFALG00000007821	GPATCH1	90	55.376	ENSMICG00000004829	GPATCH1	95	54.944	Microcebus_murinus
ENSFALG00000007821	GPATCH1	90	61.538	ENSMOCG00000000174	Gpatch1	93	62.108	Microtus_ochrogaster
ENSFALG00000007821	GPATCH1	82	49.752	ENSMMOG00000002140	gpatch1	87	50.000	Mola_mola
ENSFALG00000007821	GPATCH1	91	61.272	ENSMODG00000012226	GPATCH1	99	60.824	Monodelphis_domestica
ENSFALG00000007821	GPATCH1	89	49.541	ENSMALG00000014386	gpatch1	90	50.629	Monopterus_albus
ENSFALG00000007821	GPATCH1	99	62.566	ENSMUSG00000063808	Gpatch1	99	76.531	Mus_musculus
ENSFALG00000007821	GPATCH1	99	62.355	MGP_PahariEiJ_G0012816	Gpatch1	99	76.531	Mus_pahari
ENSFALG00000007821	GPATCH1	99	62.513	MGP_SPRETEiJ_G0030681	Gpatch1	99	76.531	Mus_spretus
ENSFALG00000007821	GPATCH1	89	63.561	ENSMPUG00000007658	GPATCH1	99	62.304	Mustela_putorius_furo
ENSFALG00000007821	GPATCH1	89	64.630	ENSMLUG00000012161	GPATCH1	99	63.512	Myotis_lucifugus
ENSFALG00000007821	GPATCH1	90	62.354	ENSNGAG00000012455	Gpatch1	99	62.036	Nannospalax_galili
ENSFALG00000007821	GPATCH1	89	63.604	ENSNLEG00000007659	GPATCH1	99	62.869	Nomascus_leucogenys
ENSFALG00000007821	GPATCH1	78	58.912	ENSMEUG00000015174	GPATCH1	78	58.912	Notamacropus_eugenii
ENSFALG00000007821	GPATCH1	89	62.134	ENSODEG00000007103	GPATCH1	99	61.709	Octodon_degus
ENSFALG00000007821	GPATCH1	81	53.521	ENSONIG00000003302	gpatch1	91	51.780	Oreochromis_niloticus
ENSFALG00000007821	GPATCH1	99	63.309	ENSOANG00000012732	GPATCH1	99	61.538	Ornithorhynchus_anatinus
ENSFALG00000007821	GPATCH1	89	62.985	ENSOCUG00000015905	GPATCH1	99	63.280	Oryctolagus_cuniculus
ENSFALG00000007821	GPATCH1	89	48.780	ENSORLG00000018706	gpatch1	90	48.819	Oryzias_latipes
ENSFALG00000007821	GPATCH1	72	52.149	ENSOMEG00000022688	gpatch1	92	48.256	Oryzias_melastigma
ENSFALG00000007821	GPATCH1	81	67.969	ENSOGAG00000004016	GPATCH1	96	67.969	Otolemur_garnettii
ENSFALG00000007821	GPATCH1	89	63.971	ENSOARG00000004365	GPATCH1	99	63.163	Ovis_aries
ENSFALG00000007821	GPATCH1	89	63.562	ENSPPAG00000020990	GPATCH1	99	62.029	Pan_paniscus
ENSFALG00000007821	GPATCH1	89	62.146	ENSPPRG00000017245	GPATCH1	99	62.051	Panthera_pardus
ENSFALG00000007821	GPATCH1	89	63.090	ENSPTIG00000019649	GPATCH1	99	63.002	Panthera_tigris_altaica
ENSFALG00000007821	GPATCH1	89	63.562	ENSPTRG00000010803	GPATCH1	99	62.029	Pan_troglodytes
ENSFALG00000007821	GPATCH1	89	62.588	ENSPANG00000012374	GPATCH1	97	62.202	Papio_anubis
ENSFALG00000007821	GPATCH1	81	54.278	ENSPKIG00000020745	gpatch1	92	50.478	Paramormyrops_kingsleyae
ENSFALG00000007821	GPATCH1	91	69.722	ENSPSIG00000013433	GPATCH1	99	69.035	Pelodiscus_sinensis
ENSFALG00000007821	GPATCH1	90	63.036	ENSPEMG00000000636	Gpatch1	99	61.409	Peromyscus_maniculatus_bairdii
ENSFALG00000007821	GPATCH1	91	61.921	ENSPCIG00000021003	GPATCH1	98	60.067	Phascolarctos_cinereus
ENSFALG00000007821	GPATCH1	70	48.387	ENSPREG00000008264	gpatch1	97	44.226	Poecilia_reticulata
ENSFALG00000007821	GPATCH1	89	61.899	ENSPPYG00000009824	GPATCH1	99	61.409	Pongo_abelii
ENSFALG00000007821	GPATCH1	81	60.399	ENSPCAG00000005931	GPATCH1	91	61.064	Procavia_capensis
ENSFALG00000007821	GPATCH1	89	61.637	ENSPCOG00000009674	GPATCH1	95	59.604	Propithecus_coquereli
ENSFALG00000007821	GPATCH1	77	65.193	ENSPVAG00000017767	GPATCH1	77	65.193	Pteropus_vampyrus
ENSFALG00000007821	GPATCH1	81	53.485	ENSPNYG00000018189	gpatch1	89	53.612	Pundamilia_nyererei
ENSFALG00000007821	GPATCH1	89	51.670	ENSPNAG00000013187	gpatch1	94	51.620	Pygocentrus_nattereri
ENSFALG00000007821	GPATCH1	99	60.463	ENSRNOG00000011584	Gpatch1	99	62.040	Rattus_norvegicus
ENSFALG00000007821	GPATCH1	99	56.151	ENSRBIG00000034723	GPATCH1	99	56.013	Rhinopithecus_bieti
ENSFALG00000007821	GPATCH1	89	62.324	ENSRROG00000024428	GPATCH1	99	62.447	Rhinopithecus_roxellana
ENSFALG00000007821	GPATCH1	89	62.924	ENSSBOG00000034650	GPATCH1	99	62.145	Saimiri_boliviensis_boliviensis
ENSFALG00000007821	GPATCH1	91	60.970	ENSSHAG00000016016	GPATCH1	99	60.460	Sarcophilus_harrisii
ENSFALG00000007821	GPATCH1	90	52.105	ENSSFOG00015011535	gpatch1	92	51.942	Scleropages_formosus
ENSFALG00000007821	GPATCH1	96	51.957	ENSSMAG00000002883	gpatch1	93	46.652	Scophthalmus_maximus
ENSFALG00000007821	GPATCH1	81	50.249	ENSSDUG00000007444	gpatch1	93	48.608	Seriola_dumerili
ENSFALG00000007821	GPATCH1	81	50.622	ENSSLDG00000002856	gpatch1	89	50.622	Seriola_lalandi_dorsalis
ENSFALG00000007821	GPATCH1	71	69.311	ENSSARG00000004108	GPATCH1	71	69.474	Sorex_araneus
ENSFALG00000007821	GPATCH1	89	63.882	ENSSSCG00000002865	GPATCH1	95	63.451	Sus_scrofa
ENSFALG00000007821	GPATCH1	99	89.434	ENSTGUG00000009401	GPATCH1	99	89.648	Taeniopygia_guttata
ENSFALG00000007821	GPATCH1	81	51.421	ENSTRUG00000005785	-	93	48.023	Takifugu_rubripes
ENSFALG00000007821	GPATCH1	81	51.421	ENSTRUG00000025081	gpatch1	93	48.023	Takifugu_rubripes
ENSFALG00000007821	GPATCH1	80	52.468	ENSTNIG00000002554	gpatch1	96	52.789	Tetraodon_nigroviridis
ENSFALG00000007821	GPATCH1	61	56.983	ENSTBEG00000007750	-	79	56.069	Tupaia_belangeri
ENSFALG00000007821	GPATCH1	89	57.783	ENSTTRG00000012221	GPATCH1	99	57.037	Tursiops_truncatus
ENSFALG00000007821	GPATCH1	89	63.127	ENSUMAG00000014645	GPATCH1	99	61.305	Ursus_maritimus
ENSFALG00000007821	GPATCH1	78	77.714	ENSVPAG00000010313	GPATCH1	87	77.717	Vicugna_pacos
ENSFALG00000007821	GPATCH1	89	62.763	ENSVVUG00000016572	GPATCH1	92	61.425	Vulpes_vulpes
ENSFALG00000007821	GPATCH1	99	51.146	ENSXETG00000018276	gpatch1	98	53.944	Xenopus_tropicalis