EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000008098 (Gene tree)
Gene ID: -
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 20221 bases
Position: chrJH603273.1:662337-682557
Accession: 24704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000008453	La	PF05383.17	4.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000008491	LARP1B-201	5413	-	ENSFALP00000008453	921 (aa)	-	U3K099

Gene Model

Click here to download ENSFALG00000008098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000008098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000008098	LARP1B	88	61.567	ENSFALG00000008335	LARP1	97	60.465

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000008098	LARP1B	99	69.348	ENSG00000138709	LARP1B	100	68.152	Homo_sapiens
ENSFALG00000008098	LARP1B	96	54.839	ENSAPOG00000020101	larp1b	85	54.246	Acanthochromis_polyacanthus
ENSFALG00000008098	LARP1B	59	68.306	ENSAMEG00000002748	LARP1B	98	67.976	Ailuropoda_melanoleuca
ENSFALG00000008098	LARP1B	96	53.516	ENSACIG00000023890	larp1b	84	52.123	Amphilophus_citrinellus
ENSFALG00000008098	LARP1B	91	52.521	ENSAOCG00000014268	larp1b	86	53.513	Amphiprion_ocellaris
ENSFALG00000008098	LARP1B	96	55.519	ENSAPEG00000004126	larp1b	84	54.900	Amphiprion_percula
ENSFALG00000008098	LARP1B	98	55.685	ENSATEG00000017849	larp1b	84	56.038	Anabas_testudineus
ENSFALG00000008098	LARP1B	95	76.796	ENSAPLG00000010129	LARP1B	98	77.017	Anas_platyrhynchos
ENSFALG00000008098	LARP1B	92	73.271	ENSACAG00000011338	LARP1B	86	73.974	Anolis_carolinensis
ENSFALG00000008098	LARP1B	75	67.288	ENSANAG00000034618	LARP1B	96	60.241	Aotus_nancymaae
ENSFALG00000008098	LARP1B	96	54.585	ENSACLG00000011948	larp1b	84	53.967	Astatotilapia_calliptera
ENSFALG00000008098	LARP1B	85	52.052	ENSAMXG00000006805	larp1b	83	50.104	Astyanax_mexicanus
ENSFALG00000008098	LARP1B	100	68.196	ENSBTAG00000012135	LARP1B	96	68.566	Bos_taurus
ENSFALG00000008098	LARP1B	98	68.662	ENSCJAG00000003338	LARP1B	99	70.877	Callithrix_jacchus
ENSFALG00000008098	LARP1B	100	68.697	ENSCAFG00000003831	LARP1B	100	69.306	Canis_familiaris
ENSFALG00000008098	LARP1B	100	68.763	ENSCAFG00020018899	LARP1B	100	68.763	Canis_lupus_dingo
ENSFALG00000008098	LARP1B	100	67.556	ENSCHIG00000023144	LARP1B	100	67.412	Capra_hircus
ENSFALG00000008098	LARP1B	98	69.172	ENSCCAG00000021948	LARP1B	99	67.974	Cebus_capucinus
ENSFALG00000008098	LARP1B	99	69.130	ENSCATG00000013541	LARP1B	100	67.935	Cercocebus_atys
ENSFALG00000008098	LARP1B	99	69.848	ENSCSAG00000003582	LARP1B	100	68.655	Chlorocebus_sabaeus
ENSFALG00000008098	LARP1B	98	62.882	ENSCHOG00000005354	LARP1B	99	63.210	Choloepus_hoffmanni
ENSFALG00000008098	LARP1B	99	74.516	ENSCPBG00000017480	LARP1B	87	75.188	Chrysemys_picta_bellii
ENSFALG00000008098	LARP1B	99	66.667	ENSCANG00000026958	LARP1B	100	65.476	Colobus_angolensis_palliatus
ENSFALG00000008098	LARP1B	95	53.055	ENSCSEG00000013519	larp1b	86	49.949	Cynoglossus_semilaevis
ENSFALG00000008098	LARP1B	96	53.048	ENSCVAG00000005046	larp1b	85	52.599	Cyprinodon_variegatus
ENSFALG00000008098	LARP1B	99	50.784	ENSDARG00000061169	larp1b	82	52.604	Danio_rerio
ENSFALG00000008098	LARP1B	56	69.574	ENSDNOG00000018765	-	99	70.196	Dasypus_novemcinctus
ENSFALG00000008098	LARP1B	87	64.214	ENSETEG00000012497	LARP1B	88	64.646	Echinops_telfairi
ENSFALG00000008098	LARP1B	93	48.156	ENSEBUG00000003668	larp1b	87	48.973	Eptatretus_burgeri
ENSFALG00000008098	LARP1B	100	67.922	ENSEASG00005018106	LARP1B	100	67.815	Equus_asinus_asinus
ENSFALG00000008098	LARP1B	100	67.666	ENSECAG00000001088	LARP1B	82	67.559	Equus_caballus
ENSFALG00000008098	LARP1B	67	54.193	ENSELUG00000023774	larp1b	69	54.050	Esox_lucius
ENSFALG00000008098	LARP1B	55	68.701	ENSFCAG00000014650	-	97	68.701	Felis_catus
ENSFALG00000008098	LARP1B	99	52.442	ENSFHEG00000010264	larp1b	83	51.852	Fundulus_heteroclitus
ENSFALG00000008098	LARP1B	66	72.348	ENSGMOG00000005207	larp1b	59	72.727	Gadus_morhua
ENSFALG00000008098	LARP1B	100	79.010	ENSGALG00000010207	LARP1B	89	79.333	Gallus_gallus
ENSFALG00000008098	LARP1B	89	57.025	ENSGAFG00000012012	larp1b	94	56.591	Gambusia_affinis
ENSFALG00000008098	LARP1B	100	49.324	ENSGACG00000004609	larp1b	86	49.948	Gasterosteus_aculeatus
ENSFALG00000008098	LARP1B	100	74.011	ENSGAGG00000017209	LARP1B	87	74.011	Gopherus_agassizii
ENSFALG00000008098	LARP1B	99	69.457	ENSGGOG00000015900	LARP1B	100	68.261	Gorilla_gorilla
ENSFALG00000008098	LARP1B	96	54.486	ENSHBUG00000009730	larp1b	84	53.870	Haplochromis_burtoni
ENSFALG00000008098	LARP1B	75	60.198	ENSHCOG00000000918	larp1b	96	60.198	Hippocampus_comes
ENSFALG00000008098	LARP1B	84	57.654	ENSIPUG00000012138	larp1b	81	52.798	Ictalurus_punctatus
ENSFALG00000008098	LARP1B	94	53.611	ENSKMAG00000011589	larp1b	85	52.401	Kryptolebias_marmoratus
ENSFALG00000008098	LARP1B	96	54.759	ENSLBEG00000005655	larp1b	86	52.899	Labrus_bergylta
ENSFALG00000008098	LARP1B	99	66.558	ENSLACG00000015247	LARP1B	100	64.721	Latimeria_chalumnae
ENSFALG00000008098	LARP1B	97	60.574	ENSLOCG00000010684	larp1b	92	62.500	Lepisosteus_oculatus
ENSFALG00000008098	LARP1B	99	70.217	ENSMFAG00000002218	LARP1B	100	69.022	Macaca_fascicularis
ENSFALG00000008098	LARP1B	99	70.109	ENSMMUG00000021347	LARP1B	100	68.913	Macaca_mulatta
ENSFALG00000008098	LARP1B	87	71.799	ENSMNEG00000030406	LARP1B	97	70.216	Macaca_nemestrina
ENSFALG00000008098	LARP1B	99	67.865	ENSMLEG00000009306	LARP1B	100	66.667	Mandrillus_leucophaeus
ENSFALG00000008098	LARP1B	99	54.536	ENSMAMG00000000081	larp1b	87	54.779	Mastacembelus_armatus
ENSFALG00000008098	LARP1B	75	59.944	ENSMZEG00005002545	larp1b	97	57.534	Maylandia_zebra
ENSFALG00000008098	LARP1B	94	70.627	ENSMGAG00000004809	LARP1B	98	69.451	Meleagris_gallopavo
ENSFALG00000008098	LARP1B	54	54.455	ENSMICG00000028052	-	97	54.118	Microcebus_murinus
ENSFALG00000008098	LARP1B	99	69.891	ENSMICG00000036111	LARP1B	99	69.891	Microcebus_murinus
ENSFALG00000008098	LARP1B	100	71.459	ENSMODG00000012300	LARP1B	83	71.459	Monodelphis_domestica
ENSFALG00000008098	LARP1B	99	53.646	ENSMALG00000003638	larp1b	86	54.180	Monopterus_albus
ENSFALG00000008098	LARP1B	100	69.124	ENSMPUG00000017365	LARP1B	83	69.124	Mustela_putorius_furo
ENSFALG00000008098	LARP1B	95	66.083	ENSMLUG00000010229	LARP1B	97	65.974	Myotis_lucifugus
ENSFALG00000008098	LARP1B	75	54.972	ENSNBRG00000023846	larp1b	79	53.059	Neolamprologus_brichardi
ENSFALG00000008098	LARP1B	99	69.381	ENSNLEG00000013819	LARP1B	100	68.187	Nomascus_leucogenys
ENSFALG00000008098	LARP1B	85	69.120	ENSMEUG00000010308	LARP1B	87	69.120	Notamacropus_eugenii
ENSFALG00000008098	LARP1B	89	60.970	ENSOPRG00000005478	LARP1B	85	67.596	Ochotona_princeps
ENSFALG00000008098	LARP1B	96	54.350	ENSONIG00000012386	larp1b	94	54.995	Oreochromis_niloticus
ENSFALG00000008098	LARP1B	100	67.308	ENSOCUG00000013330	LARP1B	100	67.308	Oryctolagus_cuniculus
ENSFALG00000008098	LARP1B	96	53.471	ENSORLG00000017954	larp1b	82	54.447	Oryzias_latipes
ENSFALG00000008098	LARP1B	96	53.471	ENSORLG00020013081	larp1b	82	54.447	Oryzias_latipes_hni
ENSFALG00000008098	LARP1B	96	53.478	ENSORLG00015009580	larp1b	82	53.125	Oryzias_latipes_hsok
ENSFALG00000008098	LARP1B	96	54.270	ENSOMEG00000004210	larp1b	82	54.919	Oryzias_melastigma
ENSFALG00000008098	LARP1B	93	71.544	ENSOGAG00000005771	LARP1B	96	71.461	Otolemur_garnettii
ENSFALG00000008098	LARP1B	99	67.861	ENSOARG00000015300	LARP1B	100	67.752	Ovis_aries
ENSFALG00000008098	LARP1B	99	69.348	ENSPPAG00000030439	LARP1B	100	68.152	Pan_paniscus
ENSFALG00000008098	LARP1B	55	68.701	ENSPPRG00000002743	-	97	68.701	Panthera_pardus
ENSFALG00000008098	LARP1B	55	68.701	ENSPTIG00000011225	LARP1B	97	68.701	Panthera_tigris_altaica
ENSFALG00000008098	LARP1B	99	69.348	ENSPTRG00000016437	LARP1B	100	68.152	Pan_troglodytes
ENSFALG00000008098	LARP1B	99	70.217	ENSPANG00000012488	LARP1B	100	69.022	Papio_anubis
ENSFALG00000008098	LARP1B	89	52.154	ENSPKIG00000014360	larp1b	92	51.233	Paramormyrops_kingsleyae
ENSFALG00000008098	LARP1B	93	77.367	ENSPSIG00000012885	LARP1B	93	76.617	Pelodiscus_sinensis
ENSFALG00000008098	LARP1B	80	58.199	ENSPMGG00000007207	larp1b	85	57.930	Periophthalmus_magnuspinnatus
ENSFALG00000008098	LARP1B	73	58.262	ENSPMAG00000002700	larp1b	94	52.221	Petromyzon_marinus
ENSFALG00000008098	LARP1B	100	71.612	ENSPCIG00000026516	LARP1B	100	73.212	Phascolarctos_cinereus
ENSFALG00000008098	LARP1B	99	52.284	ENSPFOG00000019519	larp1b	85	53.415	Poecilia_formosa
ENSFALG00000008098	LARP1B	54	48.037	ENSPFOG00000022837	-	76	50.280	Poecilia_formosa
ENSFALG00000008098	LARP1B	99	53.958	ENSPLAG00000007115	larp1b	84	54.725	Poecilia_latipinna
ENSFALG00000008098	LARP1B	99	53.433	ENSPMEG00000001224	larp1b	84	54.280	Poecilia_mexicana
ENSFALG00000008098	LARP1B	98	67.176	ENSPCAG00000007546	LARP1B	98	67.960	Procavia_capensis
ENSFALG00000008098	LARP1B	96	63.448	ENSPCOG00000021874	LARP1B	99	68.605	Propithecus_coquereli
ENSFALG00000008098	LARP1B	99	63.221	ENSPVAG00000005373	LARP1B	99	61.806	Pteropus_vampyrus
ENSFALG00000008098	LARP1B	75	60.709	ENSPNYG00000017357	larp1b	90	59.375	Pundamilia_nyererei
ENSFALG00000008098	LARP1B	81	58.648	ENSPNAG00000008823	larp1b	86	52.142	Pygocentrus_nattereri
ENSFALG00000008098	LARP1B	55	69.368	ENSRBIG00000039982	-	98	67.477	Rhinopithecus_bieti
ENSFALG00000008098	LARP1B	99	70.109	ENSRROG00000030771	LARP1B	100	68.913	Rhinopithecus_roxellana
ENSFALG00000008098	LARP1B	72	71.025	ENSSHAG00000014474	LARP1B	99	70.746	Sarcophilus_harrisii
ENSFALG00000008098	LARP1B	96	54.516	ENSSMAG00000006347	larp1b	92	53.814	Scophthalmus_maximus
ENSFALG00000008098	LARP1B	96	55.423	ENSSDUG00000004182	larp1b	83	54.784	Seriola_dumerili
ENSFALG00000008098	LARP1B	75	59.402	ENSSLDG00000014613	larp1b	72	55.288	Seriola_lalandi_dorsalis
ENSFALG00000008098	LARP1B	97	66.115	ENSSPUG00000011837	LARP1B	99	63.537	Sphenodon_punctatus
ENSFALG00000008098	LARP1B	97	55.080	ENSSPAG00000017772	larp1b	84	55.230	Stegastes_partitus
ENSFALG00000008098	LARP1B	100	66.774	ENSSSCG00000034280	LARP1B	99	92.308	Sus_scrofa
ENSFALG00000008098	LARP1B	99	84.928	ENSTGUG00000002098	-	100	86.249	Taeniopygia_guttata
ENSFALG00000008098	LARP1B	99	52.013	ENSTRUG00000005612	larp1b	84	52.366	Takifugu_rubripes
ENSFALG00000008098	LARP1B	96	52.119	ENSTNIG00000012398	larp1b	94	51.323	Tetraodon_nigroviridis
ENSFALG00000008098	LARP1B	82	61.596	ENSTBEG00000004177	LARP1B	87	59.856	Tupaia_belangeri
ENSFALG00000008098	LARP1B	91	66.509	ENSTTRG00000012984	LARP1B	92	66.392	Tursiops_truncatus
ENSFALG00000008098	LARP1B	100	68.951	ENSUMAG00000007373	LARP1B	100	68.951	Ursus_maritimus
ENSFALG00000008098	LARP1B	98	58.142	ENSVPAG00000007223	LARP1B	93	71.351	Vicugna_pacos
ENSFALG00000008098	LARP1B	100	68.697	ENSVVUG00000011307	LARP1B	100	68.697	Vulpes_vulpes
ENSFALG00000008098	LARP1B	99	56.183	ENSXETG00000022512	larp1b	89	56.564	Xenopus_tropicalis
ENSFALG00000008098	LARP1B	72	58.676	ENSXCOG00000004435	larp1b	74	55.874	Xiphophorus_couchianus
ENSFALG00000008098	LARP1B	96	54.341	ENSXMAG00000008150	larp1b	84	53.909	Xiphophorus_maculatus