EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000008381 (Gene tree)
Gene ID: -
Gene Symbol: PRDM5
Alias: PFM2
Full Name: PR/SET domain 5
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 21344 bases
Position: chrJH603273.1:2954011-2975354
Accession: 9349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000008733	zf-C2H2	PF00096.26	1.4e-16	1	2
ENSFALP00000008733	zf-C2H2	PF00096.26	1.4e-16	2	2
ENSFALP00000008733	zf-met	PF12874.7	4.6e-10	1	2
ENSFALP00000008733	zf-met	PF12874.7	4.6e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000008771	PRDM5-201	1257	-	ENSFALP00000008733	321 (aa)	-	U3K129

Gene Model

Click here to download ENSFALG00000008381's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000008381's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000008381	PRDM5	50	30.675	ENSFALG00000009796	ZBTB48	51	30.345

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000008381	PRDM5	100	80.997	ENSG00000138738	PRDM5	91	92.079	Homo_sapiens
ENSFALG00000008381	PRDM5	100	68.323	ENSAPOG00000023220	prdm5	95	66.460	Acanthochromis_polyacanthus
ENSFALG00000008381	PRDM5	83	73.585	ENSAMEG00000003050	PRDM5	78	74.340	Ailuropoda_melanoleuca
ENSFALG00000008381	PRDM5	100	65.217	ENSACIG00000000406	prdm5	95	63.354	Amphilophus_citrinellus
ENSFALG00000008381	PRDM5	100	69.876	ENSAOCG00000014806	prdm5	95	68.012	Amphiprion_ocellaris
ENSFALG00000008381	PRDM5	100	69.565	ENSAPEG00000016846	prdm5	78	68.012	Amphiprion_percula
ENSFALG00000008381	PRDM5	100	74.224	ENSATEG00000013829	prdm5	95	74.224	Anabas_testudineus
ENSFALG00000008381	PRDM5	90	95.172	ENSAPLG00000013828	PRDM5	99	95.172	Anas_platyrhynchos
ENSFALG00000008381	PRDM5	100	79.128	ENSACAG00000012999	PRDM5	95	79.128	Anolis_carolinensis
ENSFALG00000008381	PRDM5	100	79.128	ENSANAG00000027411	PRDM5	99	79.310	Aotus_nancymaae
ENSFALG00000008381	PRDM5	100	69.255	ENSACLG00000017996	prdm5	95	67.391	Astatotilapia_calliptera
ENSFALG00000008381	PRDM5	70	66.228	ENSAMXG00000041864	prdm5	97	69.737	Astyanax_mexicanus
ENSFALG00000008381	PRDM5	100	78.816	ENSBTAG00000012111	PRDM5	99	78.816	Bos_taurus
ENSFALG00000008381	PRDM5	100	79.439	ENSCJAG00000003133	PRDM5	99	79.439	Callithrix_jacchus
ENSFALG00000008381	PRDM5	84	66.914	ENSCAFG00000004179	PRDM5	83	66.914	Canis_familiaris
ENSFALG00000008381	PRDM5	100	79.128	ENSCAFG00020017685	PRDM5	99	79.128	Canis_lupus_dingo
ENSFALG00000008381	PRDM5	100	77.882	ENSCHIG00000018772	PRDM5	99	77.882	Capra_hircus
ENSFALG00000008381	PRDM5	90	79.310	ENSTSYG00000009630	PRDM5	93	79.310	Carlito_syrichta
ENSFALG00000008381	PRDM5	90	65.636	ENSCAPG00000015217	PRDM5	89	65.636	Cavia_aperea
ENSFALG00000008381	PRDM5	90	71.379	ENSCPOG00000012883	PRDM5	95	71.379	Cavia_porcellus
ENSFALG00000008381	PRDM5	100	79.128	ENSCCAG00000023157	PRDM5	99	79.128	Cebus_capucinus
ENSFALG00000008381	PRDM5	100	80.374	ENSCATG00000042510	PRDM5	99	80.374	Cercocebus_atys
ENSFALG00000008381	PRDM5	90	70.000	ENSCLAG00000005392	PRDM5	97	70.000	Chinchilla_lanigera
ENSFALG00000008381	PRDM5	100	73.209	ENSCSAG00000003729	PRDM5	99	73.209	Chlorocebus_sabaeus
ENSFALG00000008381	PRDM5	99	80.237	ENSCHOG00000007801	PRDM5	75	80.237	Choloepus_hoffmanni
ENSFALG00000008381	PRDM5	100	89.058	ENSCPBG00000024735	PRDM5	99	89.362	Chrysemys_picta_bellii
ENSFALG00000008381	PRDM5	100	80.685	ENSCANG00000036807	PRDM5	99	80.685	Colobus_angolensis_palliatus
ENSFALG00000008381	PRDM5	100	68.224	ENSCGRG00001010581	Prdm5	99	68.224	Cricetulus_griseus_chok1gshd
ENSFALG00000008381	PRDM5	90	65.862	ENSCGRG00000010996	-	92	65.862	Cricetulus_griseus_crigri
ENSFALG00000008381	PRDM5	100	68.634	ENSCSEG00000019979	prdm5	99	68.634	Cynoglossus_semilaevis
ENSFALG00000008381	PRDM5	100	74.224	ENSCVAG00000013692	prdm5	99	72.360	Cyprinodon_variegatus
ENSFALG00000008381	PRDM5	100	72.136	ENSDARG00000006288	prdm5	95	72.136	Danio_rerio
ENSFALG00000008381	PRDM5	83	78.491	ENSDNOG00000002009	PRDM5	99	78.113	Dasypus_novemcinctus
ENSFALG00000008381	PRDM5	98	42.353	ENSDORG00000007739	Prdm5	99	43.574	Dipodomys_ordii
ENSFALG00000008381	PRDM5	88	76.562	ENSETEG00000020268	PRDM5	56	76.562	Echinops_telfairi
ENSFALG00000008381	PRDM5	100	53.271	ENSEBUG00000004301	prdm5	99	52.960	Eptatretus_burgeri
ENSFALG00000008381	PRDM5	100	78.505	ENSEASG00005018365	PRDM5	99	78.505	Equus_asinus_asinus
ENSFALG00000008381	PRDM5	100	79.128	ENSECAG00000011516	PRDM5	88	79.128	Equus_caballus
ENSFALG00000008381	PRDM5	99	38.418	ENSECAG00000024747	-	99	38.418	Equus_caballus
ENSFALG00000008381	PRDM5	100	69.470	ENSEEUG00000010306	PRDM5	98	69.470	Erinaceus_europaeus
ENSFALG00000008381	PRDM5	100	74.923	ENSELUG00000005894	prdm5	94	74.224	Esox_lucius
ENSFALG00000008381	PRDM5	100	79.439	ENSFCAG00000025656	PRDM5	95	79.439	Felis_catus
ENSFALG00000008381	PRDM5	100	72.897	ENSFDAG00000021361	PRDM5	97	72.897	Fukomys_damarensis
ENSFALG00000008381	PRDM5	100	69.565	ENSFHEG00000013040	prdm5	95	70.497	Fundulus_heteroclitus
ENSFALG00000008381	PRDM5	100	64.596	ENSGMOG00000012038	prdm5	98	48.000	Gadus_morhua
ENSFALG00000008381	PRDM5	100	95.016	ENSGALG00000011963	PRDM5	99	95.016	Gallus_gallus
ENSFALG00000008381	PRDM5	100	75.776	ENSGAFG00000019233	prdm5	89	75.776	Gambusia_affinis
ENSFALG00000008381	PRDM5	100	88.182	ENSGAGG00000020362	PRDM5	98	88.788	Gopherus_agassizii
ENSFALG00000008381	PRDM5	100	80.997	ENSGGOG00000013562	PRDM5	99	80.997	Gorilla_gorilla
ENSFALG00000008381	PRDM5	100	68.634	ENSHBUG00000023375	prdm5	95	69.565	Haplochromis_burtoni
ENSFALG00000008381	PRDM5	100	73.209	ENSHGLG00000003010	PRDM5	95	73.209	Heterocephalus_glaber_female
ENSFALG00000008381	PRDM5	100	73.209	ENSHGLG00100003696	PRDM5	97	73.209	Heterocephalus_glaber_male
ENSFALG00000008381	PRDM5	100	73.684	ENSHCOG00000012131	prdm5	95	73.684	Hippocampus_comes
ENSFALG00000008381	PRDM5	100	73.375	ENSIPUG00000001248	prdm5	95	73.994	Ictalurus_punctatus
ENSFALG00000008381	PRDM5	90	68.966	ENSSTOG00000004741	PRDM5	99	68.966	Ictidomys_tridecemlineatus
ENSFALG00000008381	PRDM5	93	56.869	ENSJJAG00000011464	Prdm5	97	67.586	Jaculus_jaculus
ENSFALG00000008381	PRDM5	100	69.876	ENSKMAG00000013663	prdm5	95	70.186	Kryptolebias_marmoratus
ENSFALG00000008381	PRDM5	100	74.224	ENSLBEG00000022736	prdm5	95	74.224	Labrus_bergylta
ENSFALG00000008381	PRDM5	83	84.586	ENSLACG00000009187	PRDM5	94	84.586	Latimeria_chalumnae
ENSFALG00000008381	PRDM5	100	79.439	ENSLOCG00000009778	prdm5	95	79.439	Lepisosteus_oculatus
ENSFALG00000008381	PRDM5	100	73.209	ENSLAFG00000006532	PRDM5	95	73.209	Loxodonta_africana
ENSFALG00000008381	PRDM5	100	80.685	ENSMFAG00000045845	PRDM5	99	80.685	Macaca_fascicularis
ENSFALG00000008381	PRDM5	100	80.374	ENSMMUG00000003249	PRDM5	99	80.374	Macaca_mulatta
ENSFALG00000008381	PRDM5	100	80.685	ENSMNEG00000019018	PRDM5	99	80.685	Macaca_nemestrina
ENSFALG00000008381	PRDM5	99	73.585	ENSMLEG00000023145	PRDM5	99	78.621	Mandrillus_leucophaeus
ENSFALG00000008381	PRDM5	100	72.050	ENSMAMG00000013419	prdm5	95	72.050	Mastacembelus_armatus
ENSFALG00000008381	PRDM5	100	68.634	ENSMZEG00005020645	prdm5	95	69.565	Maylandia_zebra
ENSFALG00000008381	PRDM5	90	94.483	ENSMGAG00000010710	PRDM5	99	94.483	Meleagris_gallopavo
ENSFALG00000008381	PRDM5	100	68.536	ENSMAUG00000006768	Prdm5	99	68.536	Mesocricetus_auratus
ENSFALG00000008381	PRDM5	100	76.308	ENSMICG00000001459	PRDM5	99	76.308	Microcebus_murinus
ENSFALG00000008381	PRDM5	100	68.224	ENSMOCG00000016267	Prdm5	99	68.224	Microtus_ochrogaster
ENSFALG00000008381	PRDM5	100	70.186	ENSMMOG00000006035	prdm5	95	70.186	Mola_mola
ENSFALG00000008381	PRDM5	100	77.019	ENSMODG00000018942	PRDM5	99	75.767	Monodelphis_domestica
ENSFALG00000008381	PRDM5	100	68.634	ENSMALG00000013934	prdm5	99	67.391	Monopterus_albus
ENSFALG00000008381	PRDM5	100	69.159	MGP_CAROLIEiJ_G0028463	Prdm5	99	69.159	Mus_caroli
ENSFALG00000008381	PRDM5	100	69.159	ENSMUSG00000029913	Prdm5	99	69.159	Mus_musculus
ENSFALG00000008381	PRDM5	100	69.159	MGP_PahariEiJ_G0022203	Prdm5	99	69.159	Mus_pahari
ENSFALG00000008381	PRDM5	100	69.159	MGP_SPRETEiJ_G0029467	Prdm5	99	69.159	Mus_spretus
ENSFALG00000008381	PRDM5	100	78.505	ENSMPUG00000017415	PRDM5	99	78.505	Mustela_putorius_furo
ENSFALG00000008381	PRDM5	83	69.057	ENSMLUG00000006097	PRDM5	99	69.057	Myotis_lucifugus
ENSFALG00000008381	PRDM5	99	44.828	ENSNGAG00000018317	Prdm5	99	44.828	Nannospalax_galili
ENSFALG00000008381	PRDM5	100	69.255	ENSNBRG00000004976	prdm5	95	67.391	Neolamprologus_brichardi
ENSFALG00000008381	PRDM5	100	80.997	ENSNLEG00000009107	PRDM5	99	80.997	Nomascus_leucogenys
ENSFALG00000008381	PRDM5	67	86.441	ENSMEUG00000006576	-	56	86.441	Notamacropus_eugenii
ENSFALG00000008381	PRDM5	90	49.655	ENSOPRG00000011066	-	81	49.655	Ochotona_princeps
ENSFALG00000008381	PRDM5	99	44.025	ENSODEG00000009133	PRDM5	99	44.025	Octodon_degus
ENSFALG00000008381	PRDM5	100	73.292	ENSONIG00000003111	prdm5	95	72.308	Oreochromis_niloticus
ENSFALG00000008381	PRDM5	100	71.605	ENSOANG00000015109	PRDM5	92	69.970	Ornithorhynchus_anatinus
ENSFALG00000008381	PRDM5	87	78.417	ENSOCUG00000013454	PRDM5	89	78.417	Oryctolagus_cuniculus
ENSFALG00000008381	PRDM5	100	67.702	ENSORLG00000016247	prdm5	95	66.873	Oryzias_latipes
ENSFALG00000008381	PRDM5	100	67.391	ENSORLG00020018051	prdm5	95	67.081	Oryzias_latipes_hni
ENSFALG00000008381	PRDM5	100	67.702	ENSORLG00015013760	prdm5	95	66.873	Oryzias_latipes_hsok
ENSFALG00000008381	PRDM5	100	67.802	ENSOMEG00000005143	prdm5	95	66.563	Oryzias_melastigma
ENSFALG00000008381	PRDM5	69	72.973	ENSOGAG00000009996	PRDM5	97	72.124	Otolemur_garnettii
ENSFALG00000008381	PRDM5	90	76.207	ENSOARG00000015473	PRDM5	99	76.316	Ovis_aries
ENSFALG00000008381	PRDM5	99	74.528	ENSPPAG00000043045	PRDM5	99	78.777	Pan_paniscus
ENSFALG00000008381	PRDM5	100	79.439	ENSPPRG00000001020	PRDM5	95	79.439	Panthera_pardus
ENSFALG00000008381	PRDM5	90	77.586	ENSPTIG00000010807	PRDM5	94	77.586	Panthera_tigris_altaica
ENSFALG00000008381	PRDM5	100	80.685	ENSPTRG00000016403	PRDM5	99	80.685	Pan_troglodytes
ENSFALG00000008381	PRDM5	100	80.685	ENSPANG00000023612	PRDM5	99	80.685	Papio_anubis
ENSFALG00000008381	PRDM5	100	63.158	ENSPKIG00000015492	prdm5	74	61.610	Paramormyrops_kingsleyae
ENSFALG00000008381	PRDM5	100	88.785	ENSPSIG00000013505	PRDM5	99	88.785	Pelodiscus_sinensis
ENSFALG00000008381	PRDM5	100	69.565	ENSPMGG00000012622	prdm5	99	66.149	Periophthalmus_magnuspinnatus
ENSFALG00000008381	PRDM5	100	74.534	ENSPFOG00000018630	prdm5	89	75.776	Poecilia_formosa
ENSFALG00000008381	PRDM5	100	73.292	ENSPLAG00000014148	prdm5	95	74.224	Poecilia_latipinna
ENSFALG00000008381	PRDM5	100	69.876	ENSPMEG00000018002	prdm5	95	70.807	Poecilia_mexicana
ENSFALG00000008381	PRDM5	100	69.876	ENSPREG00000018366	prdm5	95	70.807	Poecilia_reticulata
ENSFALG00000008381	PRDM5	100	80.997	ENSPPYG00000015031	PRDM5	99	80.997	Pongo_abelii
ENSFALG00000008381	PRDM5	90	75.862	ENSPCAG00000011671	PRDM5	94	75.862	Procavia_capensis
ENSFALG00000008381	PRDM5	99	75.000	ENSPCOG00000022828	PRDM5	99	75.000	Propithecus_coquereli
ENSFALG00000008381	PRDM5	90	70.690	ENSPVAG00000012309	PRDM5	95	70.690	Pteropus_vampyrus
ENSFALG00000008381	PRDM5	100	68.944	ENSPNYG00000012194	prdm5	95	67.081	Pundamilia_nyererei
ENSFALG00000008381	PRDM5	100	69.040	ENSPNAG00000026181	prdm5	95	70.898	Pygocentrus_nattereri
ENSFALG00000008381	PRDM5	87	68.929	ENSPNAG00000023191	-	94	70.714	Pygocentrus_nattereri
ENSFALG00000008381	PRDM5	100	69.159	ENSRNOG00000023679	Prdm5	96	69.159	Rattus_norvegicus
ENSFALG00000008381	PRDM5	99	81.507	ENSRBIG00000041307	PRDM5	95	77.570	Rhinopithecus_bieti
ENSFALG00000008381	PRDM5	90	79.310	ENSRROG00000035343	PRDM5	99	79.310	Rhinopithecus_roxellana
ENSFALG00000008381	PRDM5	100	79.128	ENSSBOG00000022100	PRDM5	99	79.128	Saimiri_boliviensis_boliviensis
ENSFALG00000008381	PRDM5	83	74.717	ENSSHAG00000003250	PRDM5	99	74.717	Sarcophilus_harrisii
ENSFALG00000008381	PRDM5	100	65.528	ENSSFOG00015020478	prdm5	95	64.286	Scleropages_formosus
ENSFALG00000008381	PRDM5	100	74.845	ENSSMAG00000018844	prdm5	95	74.845	Scophthalmus_maximus
ENSFALG00000008381	PRDM5	100	76.087	ENSSDUG00000020397	prdm5	95	70.807	Seriola_dumerili
ENSFALG00000008381	PRDM5	100	76.087	ENSSLDG00000013353	prdm5	95	70.807	Seriola_lalandi_dorsalis
ENSFALG00000008381	PRDM5	78	77.344	ENSSARG00000014129	-	51	77.344	Sorex_araneus
ENSFALG00000008381	PRDM5	100	90.966	ENSSPUG00000009941	PRDM5	95	90.966	Sphenodon_punctatus
ENSFALG00000008381	PRDM5	100	74.534	ENSSPAG00000013866	prdm5	95	72.671	Stegastes_partitus
ENSFALG00000008381	PRDM5	100	79.751	ENSSSCG00000009101	PRDM5	99	79.751	Sus_scrofa
ENSFALG00000008381	PRDM5	90	94.138	ENSTGUG00000001920	PRDM5	99	94.138	Taeniopygia_guttata
ENSFALG00000008381	PRDM5	100	67.081	ENSTRUG00000013850	prdm5	95	68.731	Takifugu_rubripes
ENSFALG00000008381	PRDM5	99	70.312	ENSTNIG00000005901	prdm5	73	69.184	Tetraodon_nigroviridis
ENSFALG00000008381	PRDM5	90	76.207	ENSTBEG00000015386	PRDM5	61	76.207	Tupaia_belangeri
ENSFALG00000008381	PRDM5	100	78.193	ENSTTRG00000010996	PRDM5	99	78.193	Tursiops_truncatus
ENSFALG00000008381	PRDM5	90	68.966	ENSUAMG00000009994	PRDM5	82	68.966	Ursus_americanus
ENSFALG00000008381	PRDM5	91	75.945	ENSUMAG00000003733	PRDM5	98	75.862	Ursus_maritimus
ENSFALG00000008381	PRDM5	94	76.238	ENSVPAG00000007435	PRDM5	78	76.238	Vicugna_pacos
ENSFALG00000008381	PRDM5	87	76.978	ENSVVUG00000013192	PRDM5	99	76.978	Vulpes_vulpes
ENSFALG00000008381	PRDM5	100	79.193	ENSXETG00000002101	prdm5	95	79.193	Xenopus_tropicalis
ENSFALG00000008381	PRDM5	100	70.497	ENSXCOG00000008567	prdm5	95	70.497	Xiphophorus_couchianus
ENSFALG00000008381	PRDM5	100	75.466	ENSXMAG00000013825	prdm5	95	70.497	Xiphophorus_maculatus