EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000008450 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 2364 bases
Position: chrJH603177.1:14890412-14892775
Accession: 101808536
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000008805	EXOSC1	PF10447.9	7.4e-14	1	1
ENSFALP00000008805	ECR1_N	PF14382.6	9.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000008843	EXOSC1-201	864	-	ENSFALP00000008805	195 (aa)	XP_005048550	U3K1A1

Gene Model

Click here to download ENSFALG00000008450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000008450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000008450	EXOSC1	100	83.077	ENSG00000171311	EXOSC1	100	83.077	Homo_sapiens
ENSFALG00000008450	EXOSC1	98	78.534	ENSAPOG00000007822	exosc1	98	78.534	Acanthochromis_polyacanthus
ENSFALG00000008450	EXOSC1	100	83.077	ENSAMEG00000000129	EXOSC1	100	83.077	Ailuropoda_melanoleuca
ENSFALG00000008450	EXOSC1	96	77.128	ENSACIG00000018956	exosc1	92	77.128	Amphilophus_citrinellus
ENSFALG00000008450	EXOSC1	98	78.534	ENSAOCG00000010699	exosc1	98	78.534	Amphiprion_ocellaris
ENSFALG00000008450	EXOSC1	92	69.832	ENSAPEG00000012690	exosc1	96	69.832	Amphiprion_percula
ENSFALG00000008450	EXOSC1	98	78.010	ENSATEG00000018683	exosc1	98	78.010	Anabas_testudineus
ENSFALG00000008450	EXOSC1	99	84.974	ENSACAG00000002101	EXOSC1	99	84.974	Anolis_carolinensis
ENSFALG00000008450	EXOSC1	100	83.590	ENSANAG00000034669	EXOSC1	100	83.590	Aotus_nancymaae
ENSFALG00000008450	EXOSC1	98	78.010	ENSACLG00000021243	exosc1	98	78.010	Astatotilapia_calliptera
ENSFALG00000008450	EXOSC1	98	80.105	ENSAMXG00000011116	exosc1	98	80.105	Astyanax_mexicanus
ENSFALG00000008450	EXOSC1	100	83.077	ENSBTAG00000012699	EXOSC1	100	83.077	Bos_taurus
ENSFALG00000008450	EXOSC1	93	36.126	WBGene00012966	exos-1	91	36.126	Caenorhabditis_elegans
ENSFALG00000008450	EXOSC1	100	84.103	ENSCJAG00000016586	EXOSC1	100	84.103	Callithrix_jacchus
ENSFALG00000008450	EXOSC1	100	82.564	ENSCAFG00000009068	EXOSC1	94	82.564	Canis_familiaris
ENSFALG00000008450	EXOSC1	100	82.564	ENSCAFG00020006002	EXOSC1	94	82.564	Canis_lupus_dingo
ENSFALG00000008450	EXOSC1	100	83.077	ENSCHIG00000015253	EXOSC1	100	83.077	Capra_hircus
ENSFALG00000008450	EXOSC1	100	83.590	ENSTSYG00000000760	EXOSC1	100	83.590	Carlito_syrichta
ENSFALG00000008450	EXOSC1	100	83.077	ENSCPOG00000001173	EXOSC1	100	83.077	Cavia_porcellus
ENSFALG00000008450	EXOSC1	100	48.223	ENSCCAG00000023986	EXOSC1	100	48.223	Cebus_capucinus
ENSFALG00000008450	EXOSC1	100	83.077	ENSCATG00000034114	EXOSC1	100	83.077	Cercocebus_atys
ENSFALG00000008450	EXOSC1	100	83.590	ENSCLAG00000002463	EXOSC1	100	83.590	Chinchilla_lanigera
ENSFALG00000008450	EXOSC1	100	82.564	ENSCSAG00000005870	EXOSC1	100	82.564	Chlorocebus_sabaeus
ENSFALG00000008450	EXOSC1	96	72.193	ENSCHOG00000006477	EXOSC1	100	72.193	Choloepus_hoffmanni
ENSFALG00000008450	EXOSC1	54	82.075	ENSCPBG00000011949	EXOSC1	88	82.075	Chrysemys_picta_bellii
ENSFALG00000008450	EXOSC1	95	52.406	ENSCING00000022734	-	89	52.406	Ciona_intestinalis
ENSFALG00000008450	EXOSC1	95	55.615	ENSCSAVG00000010865	-	95	55.615	Ciona_savignyi
ENSFALG00000008450	EXOSC1	100	83.077	ENSCANG00000034159	EXOSC1	100	83.077	Colobus_angolensis_palliatus
ENSFALG00000008450	EXOSC1	100	84.615	ENSCGRG00001000335	Exosc1	100	84.615	Cricetulus_griseus_chok1gshd
ENSFALG00000008450	EXOSC1	100	84.615	ENSCGRG00000011602	Exosc1	100	84.615	Cricetulus_griseus_crigri
ENSFALG00000008450	EXOSC1	98	67.016	ENSCSEG00000007895	exosc1	95	67.016	Cynoglossus_semilaevis
ENSFALG00000008450	EXOSC1	98	73.822	ENSCVAG00000016748	exosc1	98	73.822	Cyprinodon_variegatus
ENSFALG00000008450	EXOSC1	98	80.628	ENSDARG00000059841	exosc1	98	80.628	Danio_rerio
ENSFALG00000008450	EXOSC1	75	80.405	ENSDNOG00000007983	EXOSC1	100	80.405	Dasypus_novemcinctus
ENSFALG00000008450	EXOSC1	100	83.590	ENSDORG00000016528	Exosc1	100	83.590	Dipodomys_ordii
ENSFALG00000008450	EXOSC1	94	46.032	FBgn0032346	Csl4	92	46.032	Drosophila_melanogaster
ENSFALG00000008450	EXOSC1	100	84.103	ENSETEG00000002469	-	100	84.103	Echinops_telfairi
ENSFALG00000008450	EXOSC1	99	64.286	ENSEBUG00000008164	exosc1	98	64.286	Eptatretus_burgeri
ENSFALG00000008450	EXOSC1	100	76.410	ENSEASG00005008684	EXOSC1	100	76.410	Equus_asinus_asinus
ENSFALG00000008450	EXOSC1	61	64.706	ENSECAG00000010621	EXOSC1	71	64.706	Equus_caballus
ENSFALG00000008450	EXOSC1	100	82.564	ENSEEUG00000005647	EXOSC1	100	82.564	Erinaceus_europaeus
ENSFALG00000008450	EXOSC1	94	79.348	ENSELUG00000017369	exosc1	97	64.583	Esox_lucius
ENSFALG00000008450	EXOSC1	100	83.077	ENSFCAG00000040563	EXOSC1	94	83.077	Felis_catus
ENSFALG00000008450	EXOSC1	100	84.103	ENSFDAG00000000846	EXOSC1	100	84.103	Fukomys_damarensis
ENSFALG00000008450	EXOSC1	98	74.346	ENSFHEG00000009154	exosc1	98	74.346	Fundulus_heteroclitus
ENSFALG00000008450	EXOSC1	98	78.010	ENSGMOG00000008993	exosc1	98	78.010	Gadus_morhua
ENSFALG00000008450	EXOSC1	100	80.000	ENSGALG00000039917	EXOSC1	100	95.205	Gallus_gallus
ENSFALG00000008450	EXOSC1	98	74.346	ENSGAFG00000010265	exosc1	94	74.346	Gambusia_affinis
ENSFALG00000008450	EXOSC1	98	77.487	ENSGACG00000018936	exosc1	98	77.487	Gasterosteus_aculeatus
ENSFALG00000008450	EXOSC1	100	85.641	ENSGAGG00000019192	EXOSC1	100	85.641	Gopherus_agassizii
ENSFALG00000008450	EXOSC1	100	73.333	ENSGGOG00000003099	EXOSC1	100	73.333	Gorilla_gorilla
ENSFALG00000008450	EXOSC1	98	78.010	ENSHBUG00000017857	exosc1	98	78.010	Haplochromis_burtoni
ENSFALG00000008450	EXOSC1	100	83.590	ENSHGLG00000016927	EXOSC1	100	83.590	Heterocephalus_glaber_female
ENSFALG00000008450	EXOSC1	100	83.590	ENSHGLG00100012208	EXOSC1	100	83.590	Heterocephalus_glaber_male
ENSFALG00000008450	EXOSC1	98	76.440	ENSHCOG00000019882	exosc1	98	76.440	Hippocampus_comes
ENSFALG00000008450	EXOSC1	98	79.581	ENSIPUG00000007685	exosc1	98	79.581	Ictalurus_punctatus
ENSFALG00000008450	EXOSC1	100	83.077	ENSSTOG00000006615	EXOSC1	100	83.077	Ictidomys_tridecemlineatus
ENSFALG00000008450	EXOSC1	63	68.033	ENSSTOG00000029860	-	93	68.033	Ictidomys_tridecemlineatus
ENSFALG00000008450	EXOSC1	100	82.564	ENSJJAG00000013311	Exosc1	100	82.564	Jaculus_jaculus
ENSFALG00000008450	EXOSC1	98	74.346	ENSKMAG00000001202	exosc1	81	74.346	Kryptolebias_marmoratus
ENSFALG00000008450	EXOSC1	98	78.534	ENSLBEG00000011448	exosc1	98	78.534	Labrus_bergylta
ENSFALG00000008450	EXOSC1	98	60.406	ENSLOCG00000003776	exosc1	98	60.406	Lepisosteus_oculatus
ENSFALG00000008450	EXOSC1	100	84.615	ENSLAFG00000015983	EXOSC1	100	84.615	Loxodonta_africana
ENSFALG00000008450	EXOSC1	100	83.077	ENSMFAG00000001493	EXOSC1	100	83.077	Macaca_fascicularis
ENSFALG00000008450	EXOSC1	100	83.077	ENSMMUG00000020028	EXOSC1	100	77.387	Macaca_mulatta
ENSFALG00000008450	EXOSC1	100	83.077	ENSMNEG00000029816	EXOSC1	100	83.077	Macaca_nemestrina
ENSFALG00000008450	EXOSC1	100	78.462	ENSMLEG00000027643	EXOSC1	100	78.462	Mandrillus_leucophaeus
ENSFALG00000008450	EXOSC1	98	78.010	ENSMAMG00000012200	exosc1	98	78.010	Mastacembelus_armatus
ENSFALG00000008450	EXOSC1	98	78.010	ENSMZEG00005007042	exosc1	98	78.010	Maylandia_zebra
ENSFALG00000008450	EXOSC1	100	74.872	ENSMAUG00000020462	-	100	74.872	Mesocricetus_auratus
ENSFALG00000008450	EXOSC1	100	83.077	ENSMICG00000007664	EXOSC1	100	75.385	Microcebus_murinus
ENSFALG00000008450	EXOSC1	97	78.947	ENSMOCG00000017124	-	97	78.947	Microtus_ochrogaster
ENSFALG00000008450	EXOSC1	100	84.615	ENSMOCG00000006004	-	100	84.615	Microtus_ochrogaster
ENSFALG00000008450	EXOSC1	98	58.115	ENSMMOG00000021403	exosc1	98	58.115	Mola_mola
ENSFALG00000008450	EXOSC1	100	83.673	ENSMODG00000004213	EXOSC1	100	83.673	Monodelphis_domestica
ENSFALG00000008450	EXOSC1	94	78.804	ENSMALG00000007061	exosc1	92	78.804	Monopterus_albus
ENSFALG00000008450	EXOSC1	100	84.103	MGP_CAROLIEiJ_G0022959	Exosc1	100	84.103	Mus_caroli
ENSFALG00000008450	EXOSC1	100	84.103	ENSMUSG00000034321	Exosc1	100	84.103	Mus_musculus
ENSFALG00000008450	EXOSC1	100	84.615	MGP_PahariEiJ_G0014449	Exosc1	100	84.615	Mus_pahari
ENSFALG00000008450	EXOSC1	100	84.103	MGP_SPRETEiJ_G0023880	Exosc1	100	84.103	Mus_spretus
ENSFALG00000008450	EXOSC1	100	83.077	ENSMPUG00000017044	EXOSC1	100	83.077	Mustela_putorius_furo
ENSFALG00000008450	EXOSC1	100	83.077	ENSMLUG00000009228	EXOSC1	100	83.077	Myotis_lucifugus
ENSFALG00000008450	EXOSC1	100	83.077	ENSNGAG00000022033	Exosc1	100	83.077	Nannospalax_galili
ENSFALG00000008450	EXOSC1	98	59.686	ENSNBRG00000024007	exosc1	97	59.686	Neolamprologus_brichardi
ENSFALG00000008450	EXOSC1	100	82.564	ENSNLEG00000013872	EXOSC1	100	82.564	Nomascus_leucogenys
ENSFALG00000008450	EXOSC1	59	78.261	ENSMEUG00000002246	EXOSC1	100	78.261	Notamacropus_eugenii
ENSFALG00000008450	EXOSC1	100	84.615	ENSOPRG00000005065	EXOSC1	100	84.615	Ochotona_princeps
ENSFALG00000008450	EXOSC1	100	84.103	ENSODEG00000016709	EXOSC1	100	84.103	Octodon_degus
ENSFALG00000008450	EXOSC1	98	78.010	ENSONIG00000017683	exosc1	98	78.010	Oreochromis_niloticus
ENSFALG00000008450	EXOSC1	59	86.957	ENSOANG00000006563	EXOSC1	98	84.677	Ornithorhynchus_anatinus
ENSFALG00000008450	EXOSC1	100	83.163	ENSOCUG00000011898	-	100	83.163	Oryctolagus_cuniculus
ENSFALG00000008450	EXOSC1	100	77.949	ENSOCUG00000026461	-	100	77.949	Oryctolagus_cuniculus
ENSFALG00000008450	EXOSC1	98	75.521	ENSORLG00000011595	exosc1	98	75.521	Oryzias_latipes
ENSFALG00000008450	EXOSC1	98	76.042	ENSORLG00020005831	exosc1	98	76.042	Oryzias_latipes_hni
ENSFALG00000008450	EXOSC1	98	75.521	ENSORLG00015004317	exosc1	98	75.521	Oryzias_latipes_hsok
ENSFALG00000008450	EXOSC1	98	62.827	ENSOMEG00000013907	exosc1	98	62.827	Oryzias_melastigma
ENSFALG00000008450	EXOSC1	100	82.564	ENSOGAG00000016259	EXOSC1	100	82.564	Otolemur_garnettii
ENSFALG00000008450	EXOSC1	100	82.564	ENSOARG00000010136	EXOSC1	100	82.564	Ovis_aries
ENSFALG00000008450	EXOSC1	100	78.283	ENSPPAG00000039842	EXOSC1	100	78.283	Pan_paniscus
ENSFALG00000008450	EXOSC1	100	83.077	ENSPPRG00000023366	EXOSC1	100	83.077	Panthera_pardus
ENSFALG00000008450	EXOSC1	100	83.077	ENSPTIG00000017701	EXOSC1	100	83.077	Panthera_tigris_altaica
ENSFALG00000008450	EXOSC1	100	83.077	ENSPTRG00000002808	EXOSC1	100	83.077	Pan_troglodytes
ENSFALG00000008450	EXOSC1	100	83.077	ENSPANG00000021324	EXOSC1	100	83.077	Papio_anubis
ENSFALG00000008450	EXOSC1	98	79.581	ENSPKIG00000016037	exosc1	98	79.581	Paramormyrops_kingsleyae
ENSFALG00000008450	EXOSC1	75	85.034	ENSPSIG00000013571	EXOSC1	98	82.787	Pelodiscus_sinensis
ENSFALG00000008450	EXOSC1	98	67.016	ENSPMGG00000014002	exosc1	98	67.016	Periophthalmus_magnuspinnatus
ENSFALG00000008450	EXOSC1	100	84.615	ENSPEMG00000010710	-	100	84.615	Peromyscus_maniculatus_bairdii
ENSFALG00000008450	EXOSC1	95	68.449	ENSPMAG00000000195	exosc1	95	68.449	Petromyzon_marinus
ENSFALG00000008450	EXOSC1	100	83.590	ENSPCIG00000002210	EXOSC1	99	83.590	Phascolarctos_cinereus
ENSFALG00000008450	EXOSC1	98	73.822	ENSPFOG00000006755	exosc1	94	73.822	Poecilia_formosa
ENSFALG00000008450	EXOSC1	98	73.822	ENSPLAG00000005880	exosc1	98	73.822	Poecilia_latipinna
ENSFALG00000008450	EXOSC1	98	73.822	ENSPMEG00000015598	exosc1	94	73.822	Poecilia_mexicana
ENSFALG00000008450	EXOSC1	98	64.398	ENSPREG00000000405	exosc1	93	64.398	Poecilia_reticulata
ENSFALG00000008450	EXOSC1	100	82.564	ENSPPYG00000002531	EXOSC1	100	82.564	Pongo_abelii
ENSFALG00000008450	EXOSC1	100	83.590	ENSPCAG00000009135	EXOSC1	100	83.590	Procavia_capensis
ENSFALG00000008450	EXOSC1	100	77.949	ENSPCOG00000027539	EXOSC1	100	77.949	Propithecus_coquereli
ENSFALG00000008450	EXOSC1	100	83.077	ENSPVAG00000003372	EXOSC1	100	83.077	Pteropus_vampyrus
ENSFALG00000008450	EXOSC1	98	78.010	ENSPNYG00000021745	exosc1	98	78.010	Pundamilia_nyererei
ENSFALG00000008450	EXOSC1	98	79.058	ENSPNAG00000001944	exosc1	98	79.058	Pygocentrus_nattereri
ENSFALG00000008450	EXOSC1	100	84.615	ENSRNOG00000048708	Exosc1	100	84.615	Rattus_norvegicus
ENSFALG00000008450	EXOSC1	100	83.077	ENSRBIG00000035618	EXOSC1	100	83.077	Rhinopithecus_bieti
ENSFALG00000008450	EXOSC1	100	83.077	ENSRROG00000032589	EXOSC1	100	75.385	Rhinopithecus_roxellana
ENSFALG00000008450	EXOSC1	100	83.590	ENSSBOG00000000359	EXOSC1	100	83.590	Saimiri_boliviensis_boliviensis
ENSFALG00000008450	EXOSC1	75	87.755	ENSSHAG00000018219	EXOSC1	100	87.755	Sarcophilus_harrisii
ENSFALG00000008450	EXOSC1	97	75.661	ENSSFOG00015016289	-	97	75.661	Scleropages_formosus
ENSFALG00000008450	EXOSC1	98	78.010	ENSSFOG00015009069	exosc1	98	78.010	Scleropages_formosus
ENSFALG00000008450	EXOSC1	98	78.010	ENSSMAG00000003721	exosc1	98	78.010	Scophthalmus_maximus
ENSFALG00000008450	EXOSC1	98	78.010	ENSSDUG00000002993	exosc1	98	78.010	Seriola_dumerili
ENSFALG00000008450	EXOSC1	98	78.010	ENSSLDG00000025181	exosc1	98	78.010	Seriola_lalandi_dorsalis
ENSFALG00000008450	EXOSC1	100	73.333	ENSSARG00000000162	EXOSC1	100	73.333	Sorex_araneus
ENSFALG00000008450	EXOSC1	99	81.959	ENSSPUG00000012263	EXOSC1	99	81.959	Sphenodon_punctatus
ENSFALG00000008450	EXOSC1	98	70.681	ENSSPAG00000016792	exosc1	82	70.681	Stegastes_partitus
ENSFALG00000008450	EXOSC1	100	82.051	ENSSSCG00000010518	EXOSC1	91	82.051	Sus_scrofa
ENSFALG00000008450	EXOSC1	98	96.875	ENSTGUG00000009692	EXOSC1	99	96.875	Taeniopygia_guttata
ENSFALG00000008450	EXOSC1	97	70.000	ENSTRUG00000007706	exosc1	98	70.000	Takifugu_rubripes
ENSFALG00000008450	EXOSC1	97	70.466	ENSTNIG00000014079	exosc1	97	70.466	Tetraodon_nigroviridis
ENSFALG00000008450	EXOSC1	100	77.949	ENSTBEG00000006011	EXOSC1	100	77.949	Tupaia_belangeri
ENSFALG00000008450	EXOSC1	94	83.152	ENSTTRG00000009887	EXOSC1	100	83.152	Tursiops_truncatus
ENSFALG00000008450	EXOSC1	100	68.205	ENSUAMG00000010266	EXOSC1	100	68.205	Ursus_americanus
ENSFALG00000008450	EXOSC1	100	68.205	ENSUMAG00000022002	EXOSC1	100	68.205	Ursus_maritimus
ENSFALG00000008450	EXOSC1	100	82.564	ENSVVUG00000023192	EXOSC1	63	82.564	Vulpes_vulpes
ENSFALG00000008450	EXOSC1	98	76.562	ENSXETG00000003434	exosc1	99	76.562	Xenopus_tropicalis
ENSFALG00000008450	EXOSC1	62	80.000	ENSXCOG00000014499	exosc1	92	80.000	Xiphophorus_couchianus
ENSFALG00000008450	EXOSC1	98	64.921	ENSXMAG00000023382	exosc1	93	64.921	Xiphophorus_maculatus