EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000008766 (Gene tree)
Gene ID: -
Gene Symbol: RNF17
Alias: FLJ11045|Mmip-2|SPATA23|TDRD4
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 45306 bases
Position: chrJH603207.1:8298492-8343797
Accession: 101820651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000009144	TUDOR	PF00567.24	9.6e-87	1	5
ENSFALP00000009144	TUDOR	PF00567.24	9.6e-87	2	5
ENSFALP00000009144	TUDOR	PF00567.24	9.6e-87	3	5
ENSFALP00000009144	TUDOR	PF00567.24	9.6e-87	4	5
ENSFALP00000009144	TUDOR	PF00567.24	9.6e-87	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000009183	RNF17-201	4915	XM_005038125	ENSFALP00000009144	1495 (aa)	XP_005038182	U3K290

Gene Model

Click here to download ENSFALG00000008766's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000008766's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000008766	RNF17	92	52.555	ENSG00000132972	RNF17	99	50.816	Homo_sapiens
ENSFALG00000008766	RNF17	72	34.161	ENSAPOG00000017034	rnf17	75	34.309	Acanthochromis_polyacanthus
ENSFALG00000008766	RNF17	93	52.350	ENSAMEG00000017340	RNF17	87	52.597	Ailuropoda_melanoleuca
ENSFALG00000008766	RNF17	80	34.098	ENSAOCG00000018283	rnf17	77	34.311	Amphiprion_ocellaris
ENSFALG00000008766	RNF17	89	32.133	ENSAPEG00000022338	rnf17	97	32.277	Amphiprion_percula
ENSFALG00000008766	RNF17	74	34.072	ENSATEG00000002067	rnf17	81	34.072	Anabas_testudineus
ENSFALG00000008766	RNF17	88	65.144	ENSAPLG00000003969	RNF17	100	59.486	Anas_platyrhynchos
ENSFALG00000008766	RNF17	98	47.924	ENSACAG00000001418	RNF17	96	47.267	Anolis_carolinensis
ENSFALG00000008766	RNF17	89	45.921	ENSANAG00000029969	RNF17	96	41.352	Aotus_nancymaae
ENSFALG00000008766	RNF17	79	33.224	ENSACLG00000018279	rnf17	74	33.116	Astatotilapia_calliptera
ENSFALG00000008766	RNF17	93	30.267	ENSAMXG00000011002	rnf17	96	30.337	Astyanax_mexicanus
ENSFALG00000008766	RNF17	63	47.951	ENSBTAG00000000278	RNF17	100	47.951	Bos_taurus
ENSFALG00000008766	RNF17	91	51.537	ENSCJAG00000018937	RNF17	100	46.861	Callithrix_jacchus
ENSFALG00000008766	RNF17	90	53.267	ENSCAFG00000007418	RNF17	86	53.583	Canis_familiaris
ENSFALG00000008766	RNF17	51	47.945	ENSCAFG00020002919	-	100	48.554	Canis_lupus_dingo
ENSFALG00000008766	RNF17	79	52.142	ENSCHIG00000026716	RNF17	100	48.407	Capra_hircus
ENSFALG00000008766	RNF17	91	51.825	ENSTSYG00000000365	RNF17	99	47.641	Carlito_syrichta
ENSFALG00000008766	RNF17	90	41.397	ENSCAPG00000012908	RNF17	100	41.397	Cavia_aperea
ENSFALG00000008766	RNF17	94	46.535	ENSCCAG00000026725	RNF17	99	46.970	Cebus_capucinus
ENSFALG00000008766	RNF17	91	52.393	ENSCATG00000040352	RNF17	100	47.489	Cercocebus_atys
ENSFALG00000008766	RNF17	90	52.688	ENSCLAG00000004127	RNF17	88	51.392	Chinchilla_lanigera
ENSFALG00000008766	RNF17	91	52.474	ENSCSAG00000018019	RNF17	86	52.512	Chlorocebus_sabaeus
ENSFALG00000008766	RNF17	60	70.000	ENSCHOG00000013310	RNF17	59	70.000	Choloepus_hoffmanni
ENSFALG00000008766	RNF17	94	50.714	ENSCPBG00000020920	RNF17	99	50.714	Chrysemys_picta_bellii
ENSFALG00000008766	RNF17	91	52.354	ENSCANG00000032927	RNF17	99	47.800	Colobus_angolensis_palliatus
ENSFALG00000008766	RNF17	90	51.073	ENSCGRG00001022658	Rnf17	86	50.119	Cricetulus_griseus_chok1gshd
ENSFALG00000008766	RNF17	90	51.073	ENSCGRG00000009924	Rnf17	86	50.119	Cricetulus_griseus_crigri
ENSFALG00000008766	RNF17	79	31.987	ENSCSEG00000008626	rnf17	81	31.987	Cynoglossus_semilaevis
ENSFALG00000008766	RNF17	67	35.890	ENSCVAG00000017008	rnf17	81	35.890	Cyprinodon_variegatus
ENSFALG00000008766	RNF17	79	32.727	ENSDARG00000056387	rnf17	74	32.727	Danio_rerio
ENSFALG00000008766	RNF17	90	52.275	ENSDNOG00000006115	RNF17	86	51.154	Dasypus_novemcinctus
ENSFALG00000008766	RNF17	52	46.271	ENSEASG00005001421	-	100	46.271	Equus_asinus_asinus
ENSFALG00000008766	RNF17	90	51.937	ENSECAG00000017152	RNF17	86	50.954	Equus_caballus
ENSFALG00000008766	RNF17	72	57.708	ENSEEUG00000000332	RNF17	74	57.708	Erinaceus_europaeus
ENSFALG00000008766	RNF17	79	34.223	ENSELUG00000005626	rnf17	74	34.223	Esox_lucius
ENSFALG00000008766	RNF17	92	52.177	ENSFCAG00000004914	RNF17	100	48.558	Felis_catus
ENSFALG00000008766	RNF17	91	51.605	ENSFDAG00000017857	RNF17	87	50.635	Fukomys_damarensis
ENSFALG00000008766	RNF17	80	32.836	ENSFHEG00000014822	rnf17	77	32.937	Fundulus_heteroclitus
ENSFALG00000008766	RNF17	55	33.463	ENSGMOG00000015560	-	100	33.463	Gadus_morhua
ENSFALG00000008766	RNF17	78	32.229	ENSGAFG00000004463	rnf17	89	32.348	Gambusia_affinis
ENSFALG00000008766	RNF17	51	35.067	ENSGACG00000001340	-	100	35.067	Gasterosteus_aculeatus
ENSFALG00000008766	RNF17	90	48.211	ENSGAGG00000016999	RNF17	93	49.083	Gopherus_agassizii
ENSFALG00000008766	RNF17	92	52.717	ENSGGOG00000014491	RNF17	100	46.917	Gorilla_gorilla
ENSFALG00000008766	RNF17	79	33.197	ENSHBUG00000003554	rnf17	74	33.197	Haplochromis_burtoni
ENSFALG00000008766	RNF17	90	50.908	ENSHGLG00000007270	RNF17	86	49.960	Heterocephalus_glaber_female
ENSFALG00000008766	RNF17	90	50.990	ENSHGLG00100017393	RNF17	91	46.944	Heterocephalus_glaber_male
ENSFALG00000008766	RNF17	68	43.478	ENSHCOG00000017676	rnf17	82	43.478	Hippocampus_comes
ENSFALG00000008766	RNF17	79	34.768	ENSIPUG00000001087	rnf17	80	34.768	Ictalurus_punctatus
ENSFALG00000008766	RNF17	90	50.743	ENSJJAG00000016584	Rnf17	86	49.880	Jaculus_jaculus
ENSFALG00000008766	RNF17	79	32.547	ENSKMAG00000013403	rnf17	77	32.118	Kryptolebias_marmoratus
ENSFALG00000008766	RNF17	73	34.227	ENSLBEG00000014910	rnf17	73	34.316	Labrus_bergylta
ENSFALG00000008766	RNF17	69	48.109	ENSLACG00000000323	RNF17	92	48.109	Latimeria_chalumnae
ENSFALG00000008766	RNF17	79	31.592	ENSLOCG00000010768	rnf17	74	31.643	Lepisosteus_oculatus
ENSFALG00000008766	RNF17	91	52.474	ENSMFAG00000032388	RNF17	100	47.336	Macaca_fascicularis
ENSFALG00000008766	RNF17	91	52.474	ENSMMUG00000014610	RNF17	100	47.336	Macaca_mulatta
ENSFALG00000008766	RNF17	91	52.474	ENSMNEG00000011234	RNF17	100	47.945	Macaca_nemestrina
ENSFALG00000008766	RNF17	91	52.730	ENSMLEG00000030227	RNF17	86	52.730	Mandrillus_leucophaeus
ENSFALG00000008766	RNF17	79	33.222	ENSMAMG00000020403	rnf17	87	33.222	Mastacembelus_armatus
ENSFALG00000008766	RNF17	79	33.116	ENSMZEG00005019166	rnf17	74	33.116	Maylandia_zebra
ENSFALG00000008766	RNF17	80	61.319	ENSMGAG00000015138	RNF17	99	61.319	Meleagris_gallopavo
ENSFALG00000008766	RNF17	89	49.917	ENSMAUG00000004788	Rnf17	86	49.006	Mesocricetus_auratus
ENSFALG00000008766	RNF17	92	51.990	ENSMICG00000010364	RNF17	100	47.193	Microcebus_murinus
ENSFALG00000008766	RNF17	63	49.141	ENSMOCG00000011818	-	100	49.141	Microtus_ochrogaster
ENSFALG00000008766	RNF17	74	34.118	ENSMMOG00000019514	rnf17	86	34.118	Mola_mola
ENSFALG00000008766	RNF17	91	54.889	ENSMODG00000007827	RNF17	91	48.883	Monodelphis_domestica
ENSFALG00000008766	RNF17	73	34.161	ENSMALG00000016943	rnf17	76	34.161	Monopterus_albus
ENSFALG00000008766	RNF17	90	50.902	MGP_CAROLIEiJ_G0019337	Rnf17	86	49.960	Mus_caroli
ENSFALG00000008766	RNF17	90	50.656	ENSMUSG00000000365	Rnf17	86	49.723	Mus_musculus
ENSFALG00000008766	RNF17	90	50.943	MGP_PahariEiJ_G0030355	Rnf17	86	50.000	Mus_pahari
ENSFALG00000008766	RNF17	90	50.942	MGP_SPRETEiJ_G0020228	Rnf17	86	50.000	Mus_spretus
ENSFALG00000008766	RNF17	92	52.764	ENSMPUG00000013305	RNF17	87	53.013	Mustela_putorius_furo
ENSFALG00000008766	RNF17	91	51.864	ENSMLUG00000003903	RNF17	85	52.029	Myotis_lucifugus
ENSFALG00000008766	RNF17	89	51.898	ENSNGAG00000013553	Rnf17	86	50.672	Nannospalax_galili
ENSFALG00000008766	RNF17	88	34.332	ENSNBRG00000012006	rnf17	97	34.332	Neolamprologus_brichardi
ENSFALG00000008766	RNF17	91	52.520	ENSNLEG00000013780	RNF17	100	47.248	Nomascus_leucogenys
ENSFALG00000008766	RNF17	73	54.971	ENSOPRG00000016743	-	70	54.971	Ochotona_princeps
ENSFALG00000008766	RNF17	53	44.785	ENSODEG00000005443	-	100	44.785	Octodon_degus
ENSFALG00000008766	RNF17	80	32.808	ENSONIG00000015746	rnf17	100	33.198	Oreochromis_niloticus
ENSFALG00000008766	RNF17	90	52.558	ENSOCUG00000007384	RNF17	87	51.472	Oryctolagus_cuniculus
ENSFALG00000008766	RNF17	79	33.552	ENSORLG00000012818	rnf17	99	31.745	Oryzias_latipes
ENSFALG00000008766	RNF17	79	33.634	ENSORLG00020009879	-	92	31.511	Oryzias_latipes_hni
ENSFALG00000008766	RNF17	79	33.635	ENSORLG00015013027	-	92	31.508	Oryzias_latipes_hsok
ENSFALG00000008766	RNF17	73	32.496	ENSOMEG00000009891	rnf17	87	32.496	Oryzias_melastigma
ENSFALG00000008766	RNF17	93	52.075	ENSOGAG00000014803	RNF17	87	52.319	Otolemur_garnettii
ENSFALG00000008766	RNF17	90	52.059	ENSOARG00000014641	RNF17	88	50.991	Ovis_aries
ENSFALG00000008766	RNF17	80	51.510	ENSPPAG00000028779	RNF17	100	47.130	Pan_paniscus
ENSFALG00000008766	RNF17	92	51.855	ENSPPRG00000009230	RNF17	100	48.558	Panthera_pardus
ENSFALG00000008766	RNF17	92	51.855	ENSPTIG00000001738	RNF17	100	48.407	Panthera_tigris_altaica
ENSFALG00000008766	RNF17	92	52.602	ENSPTRG00000005713	RNF17	100	47.130	Pan_troglodytes
ENSFALG00000008766	RNF17	91	52.265	ENSPANG00000007640	RNF17	100	47.489	Papio_anubis
ENSFALG00000008766	RNF17	81	33.078	ENSPKIG00000001648	rnf17	96	33.078	Paramormyrops_kingsleyae
ENSFALG00000008766	RNF17	79	58.216	ENSPSIG00000011245	RNF17	100	58.216	Pelodiscus_sinensis
ENSFALG00000008766	RNF17	90	51.272	ENSPEMG00000008693	Rnf17	86	50.316	Peromyscus_maniculatus_bairdii
ENSFALG00000008766	RNF17	60	54.298	ENSPCIG00000009190	-	93	54.286	Phascolarctos_cinereus
ENSFALG00000008766	RNF17	80	32.835	ENSPFOG00000007124	rnf17	77	32.992	Poecilia_formosa
ENSFALG00000008766	RNF17	80	33.122	ENSPLAG00000006198	rnf17	77	33.360	Poecilia_latipinna
ENSFALG00000008766	RNF17	80	33.043	ENSPMEG00000022432	rnf17	77	33.201	Poecilia_mexicana
ENSFALG00000008766	RNF17	78	33.192	ENSPREG00000001414	rnf17	82	33.389	Poecilia_reticulata
ENSFALG00000008766	RNF17	91	52.346	ENSPPYG00000005215	RNF17	86	52.346	Pongo_abelii
ENSFALG00000008766	RNF17	63	54.386	ENSPCAG00000002665	RNF17	62	54.386	Procavia_capensis
ENSFALG00000008766	RNF17	84	61.940	ENSPCOG00000020211	RNF17	83	61.940	Propithecus_coquereli
ENSFALG00000008766	RNF17	88	51.799	ENSPVAG00000013021	RNF17	83	51.799	Pteropus_vampyrus
ENSFALG00000008766	RNF17	87	35.811	ENSPNAG00000027505	rnf17	85	33.611	Pygocentrus_nattereri
ENSFALG00000008766	RNF17	90	51.721	ENSRNOG00000008059	Rnf17	86	50.751	Rattus_norvegicus
ENSFALG00000008766	RNF17	91	49.839	ENSRBIG00000027010	RNF17	86	49.839	Rhinopithecus_bieti
ENSFALG00000008766	RNF17	91	52.068	ENSRROG00000022801	RNF17	100	47.184	Rhinopithecus_roxellana
ENSFALG00000008766	RNF17	92	52.029	ENSSBOG00000021661	RNF17	99	46.818	Saimiri_boliviensis_boliviensis
ENSFALG00000008766	RNF17	91	54.873	ENSSHAG00000005609	RNF17	92	48.298	Sarcophilus_harrisii
ENSFALG00000008766	RNF17	79	34.651	ENSSFOG00015023037	rnf17	89	34.651	Scleropages_formosus
ENSFALG00000008766	RNF17	72	33.573	ENSSMAG00000007429	rnf17	74	33.573	Scophthalmus_maximus
ENSFALG00000008766	RNF17	72	33.749	ENSSDUG00000013530	rnf17	77	33.749	Seriola_dumerili
ENSFALG00000008766	RNF17	72	34.283	ENSSLDG00000019577	rnf17	75	34.283	Seriola_lalandi_dorsalis
ENSFALG00000008766	RNF17	86	54.397	ENSSARG00000003016	RNF17	76	54.397	Sorex_araneus
ENSFALG00000008766	RNF17	86	48.815	ENSSPUG00000008917	RNF17	93	48.815	Sphenodon_punctatus
ENSFALG00000008766	RNF17	71	33.424	ENSSPAG00000001925	rnf17	76	33.486	Stegastes_partitus
ENSFALG00000008766	RNF17	91	51.278	ENSSSCG00000009572	RNF17	86	50.119	Sus_scrofa
ENSFALG00000008766	RNF17	72	89.474	ENSTGUG00000011267	-	100	89.474	Taeniopygia_guttata
ENSFALG00000008766	RNF17	59	93.220	ENSTGUG00000011272	-	100	93.220	Taeniopygia_guttata
ENSFALG00000008766	RNF17	86	31.449	ENSTRUG00000015498	rnf17	87	31.449	Takifugu_rubripes
ENSFALG00000008766	RNF17	78	32.013	ENSTNIG00000015681	rnf17	99	32.234	Tetraodon_nigroviridis
ENSFALG00000008766	RNF17	76	72.581	ENSTBEG00000000282	RNF17	68	72.581	Tupaia_belangeri
ENSFALG00000008766	RNF17	92	60.079	ENSTTRG00000012698	RNF17	83	60.079	Tursiops_truncatus
ENSFALG00000008766	RNF17	51	47.184	ENSUMAG00000013953	-	100	47.793	Ursus_maritimus
ENSFALG00000008766	RNF17	68	60.563	ENSVPAG00000011388	RNF17	67	60.563	Vicugna_pacos
ENSFALG00000008766	RNF17	92	52.884	ENSVVUG00000006226	RNF17	87	53.128	Vulpes_vulpes
ENSFALG00000008766	RNF17	75	38.055	ENSXETG00000034020	RNF17	100	39.642	Xenopus_tropicalis
ENSFALG00000008766	RNF17	72	33.242	ENSXCOG00000018295	rnf17	77	33.364	Xiphophorus_couchianus
ENSFALG00000008766	RNF17	86	30.548	ENSXMAG00000014747	rnf17	97	30.686	Xiphophorus_maculatus