EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000008775 (Gene tree)
Gene ID: -
Gene Symbol: PDCD11
Alias: ALG-4|KIAA0185|RRP5
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 23110 bases
Position: chrJH603177.1:16585051-16608160
Accession: 101807255
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000009154	Suf	PF05843.14	9.2e-12	1	1
ENSFALP00000009154	S1	PF00575.23	4.8e-62	1	4
ENSFALP00000009154	S1	PF00575.23	4.8e-62	2	4
ENSFALP00000009154	S1	PF00575.23	4.8e-62	3	4
ENSFALP00000009154	S1	PF00575.23	4.8e-62	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000009193	PDCD11-201	6156	XM_005048587	ENSFALP00000009154	1833 (aa)	XP_005048644	U3K2A0

Gene Model

Click here to download ENSFALG00000008775's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000008775's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000008775	PDCD11	99	55.957	ENSG00000148843	PDCD11	99	56.017	Homo_sapiens
ENSFALG00000008775	PDCD11	99	45.660	ENSAPOG00000015629	pdcd11	99	45.754	Acanthochromis_polyacanthus
ENSFALG00000008775	PDCD11	99	55.520	ENSAMEG00000017935	PDCD11	99	55.520	Ailuropoda_melanoleuca
ENSFALG00000008775	PDCD11	50	40.792	ENSACIG00000006458	-	98	40.792	Amphilophus_citrinellus
ENSFALG00000008775	PDCD11	99	45.474	ENSAOCG00000015287	pdcd11	99	45.210	Amphiprion_ocellaris
ENSFALG00000008775	PDCD11	54	43.246	ENSAPEG00000020240	pdcd11	96	43.246	Amphiprion_percula
ENSFALG00000008775	PDCD11	99	45.019	ENSATEG00000021043	pdcd11	99	45.118	Anabas_testudineus
ENSFALG00000008775	PDCD11	99	78.762	ENSAPLG00000010301	PDCD11	99	78.655	Anas_platyrhynchos
ENSFALG00000008775	PDCD11	99	60.770	ENSACAG00000004796	PDCD11	99	60.662	Anolis_carolinensis
ENSFALG00000008775	PDCD11	99	56.147	ENSANAG00000034576	PDCD11	100	56.017	Aotus_nancymaae
ENSFALG00000008775	PDCD11	91	60.177	ENSACLG00000018236	pdcd11	96	67.391	Astatotilapia_calliptera
ENSFALG00000008775	PDCD11	99	40.470	ENSAMXG00000005458	pdcd11	100	40.470	Astyanax_mexicanus
ENSFALG00000008775	PDCD11	99	54.883	ENSBTAG00000009715	PDCD11	99	54.830	Bos_taurus
ENSFALG00000008775	PDCD11	99	55.556	ENSCJAG00000018257	PDCD11	100	54.976	Callithrix_jacchus
ENSFALG00000008775	PDCD11	99	55.325	ENSCAFG00000010411	PDCD11	99	55.485	Canis_familiaris
ENSFALG00000008775	PDCD11	99	56.071	ENSCAFG00020010369	PDCD11	99	56.071	Canis_lupus_dingo
ENSFALG00000008775	PDCD11	99	54.483	ENSCHIG00000025218	PDCD11	100	54.642	Capra_hircus
ENSFALG00000008775	PDCD11	98	53.319	ENSTSYG00000033423	PDCD11	99	53.099	Carlito_syrichta
ENSFALG00000008775	PDCD11	91	49.707	ENSCAPG00000005386	PDCD11	99	49.642	Cavia_aperea
ENSFALG00000008775	PDCD11	99	55.217	ENSCPOG00000010957	PDCD11	99	56.201	Cavia_porcellus
ENSFALG00000008775	PDCD11	99	55.455	ENSCCAG00000018950	PDCD11	100	54.870	Cebus_capucinus
ENSFALG00000008775	PDCD11	99	55.904	ENSCATG00000044331	PDCD11	99	55.319	Cercocebus_atys
ENSFALG00000008775	PDCD11	99	55.787	ENSCLAG00000001029	PDCD11	99	55.200	Chinchilla_lanigera
ENSFALG00000008775	PDCD11	99	55.911	ENSCSAG00000005346	PDCD11	99	56.017	Chlorocebus_sabaeus
ENSFALG00000008775	PDCD11	81	79.070	ENSCHOG00000004796	PDCD11	89	79.070	Choloepus_hoffmanni
ENSFALG00000008775	PDCD11	100	64.596	ENSCPBG00000024487	PDCD11	99	84.195	Chrysemys_picta_bellii
ENSFALG00000008775	PDCD11	99	55.857	ENSCANG00000043300	PDCD11	99	55.272	Colobus_angolensis_palliatus
ENSFALG00000008775	PDCD11	99	55.668	ENSCGRG00001006458	Pdcd11	99	55.804	Cricetulus_griseus_chok1gshd
ENSFALG00000008775	PDCD11	99	55.686	ENSCGRG00000003583	Pdcd11	99	55.823	Cricetulus_griseus_crigri
ENSFALG00000008775	PDCD11	97	45.156	ENSCSEG00000010739	pdcd11	99	45.117	Cynoglossus_semilaevis
ENSFALG00000008775	PDCD11	95	50.891	ENSCVAG00000018903	pdcd11	98	51.299	Cyprinodon_variegatus
ENSFALG00000008775	PDCD11	100	43.162	ENSDARG00000052480	pdcd11	100	43.155	Danio_rerio
ENSFALG00000008775	PDCD11	99	55.178	ENSDNOG00000013838	PDCD11	99	55.048	Dasypus_novemcinctus
ENSFALG00000008775	PDCD11	99	54.949	ENSDORG00000010420	Pdcd11	99	55.189	Dipodomys_ordii
ENSFALG00000008775	PDCD11	60	37.237	FBgn0039182	CG5728	72	39.051	Drosophila_melanogaster
ENSFALG00000008775	PDCD11	95	48.819	ENSETEG00000000813	PDCD11	100	48.425	Echinops_telfairi
ENSFALG00000008775	PDCD11	72	52.174	ENSEBUG00000002358	-	92	54.152	Eptatretus_burgeri
ENSFALG00000008775	PDCD11	95	56.466	ENSEASG00005015159	PDCD11	99	55.853	Equus_asinus_asinus
ENSFALG00000008775	PDCD11	99	55.691	ENSECAG00000020507	PDCD11	99	55.638	Equus_caballus
ENSFALG00000008775	PDCD11	97	54.477	ENSEEUG00000009245	PDCD11	91	54.127	Erinaceus_europaeus
ENSFALG00000008775	PDCD11	99	45.410	ENSELUG00000004211	pdcd11	99	45.356	Esox_lucius
ENSFALG00000008775	PDCD11	99	55.928	ENSFCAG00000002384	PDCD11	99	55.981	Felis_catus
ENSFALG00000008775	PDCD11	99	55.035	ENSFDAG00000009532	PDCD11	99	54.768	Fukomys_damarensis
ENSFALG00000008775	PDCD11	99	66.554	ENSFHEG00000022997	pdcd11	94	69.343	Fundulus_heteroclitus
ENSFALG00000008775	PDCD11	93	45.581	ENSGMOG00000004186	pdcd11	94	45.581	Gadus_morhua
ENSFALG00000008775	PDCD11	77	79.451	ENSGALG00000008265	PDCD11	99	79.063	Gallus_gallus
ENSFALG00000008775	PDCD11	94	51.934	ENSGAFG00000012806	pdcd11	99	51.750	Gambusia_affinis
ENSFALG00000008775	PDCD11	99	44.079	ENSGACG00000018233	pdcd11	97	58.854	Gasterosteus_aculeatus
ENSFALG00000008775	PDCD11	95	68.991	ENSGAGG00000024314	PDCD11	100	68.852	Gopherus_agassizii
ENSFALG00000008775	PDCD11	99	55.904	ENSGGOG00000011621	PDCD11	99	55.431	Gorilla_gorilla
ENSFALG00000008775	PDCD11	99	44.764	ENSHBUG00000020226	pdcd11	99	44.902	Haplochromis_burtoni
ENSFALG00000008775	PDCD11	99	54.642	ENSHGLG00000001462	PDCD11	99	54.109	Heterocephalus_glaber_female
ENSFALG00000008775	PDCD11	99	53.949	ENSHGLG00100018779	PDCD11	99	53.415	Heterocephalus_glaber_male
ENSFALG00000008775	PDCD11	99	43.980	ENSHCOG00000016006	pdcd11	99	43.952	Hippocampus_comes
ENSFALG00000008775	PDCD11	63	41.788	ENSIPUG00000015102	pdcd11	99	41.424	Ictalurus_punctatus
ENSFALG00000008775	PDCD11	99	55.455	ENSSTOG00000014553	PDCD11	99	55.401	Ictidomys_tridecemlineatus
ENSFALG00000008775	PDCD11	99	55.204	ENSJJAG00000015523	Pdcd11	99	55.224	Jaculus_jaculus
ENSFALG00000008775	PDCD11	50	43.026	ENSKMAG00000021182	pdcd11	98	43.026	Kryptolebias_marmoratus
ENSFALG00000008775	PDCD11	100	48.891	ENSLOCG00000011818	pdcd11	100	49.270	Lepisosteus_oculatus
ENSFALG00000008775	PDCD11	99	55.855	ENSLAFG00000008398	PDCD11	99	55.801	Loxodonta_africana
ENSFALG00000008775	PDCD11	99	56.070	ENSMFAG00000044058	PDCD11	99	55.485	Macaca_fascicularis
ENSFALG00000008775	PDCD11	99	56.070	ENSMMUG00000007058	PDCD11	99	55.485	Macaca_mulatta
ENSFALG00000008775	PDCD11	99	56.017	ENSMNEG00000040726	PDCD11	99	55.431	Macaca_nemestrina
ENSFALG00000008775	PDCD11	99	56.409	ENSMLEG00000040978	PDCD11	99	56.301	Mandrillus_leucophaeus
ENSFALG00000008775	PDCD11	99	44.348	ENSMAMG00000009572	pdcd11	99	44.649	Mastacembelus_armatus
ENSFALG00000008775	PDCD11	99	44.818	ENSMZEG00005008949	pdcd11	99	44.957	Maylandia_zebra
ENSFALG00000008775	PDCD11	100	78.499	ENSMGAG00000010482	PDCD11	100	80.096	Meleagris_gallopavo
ENSFALG00000008775	PDCD11	99	58.459	ENSMAUG00000014924	Pdcd11	96	57.692	Mesocricetus_auratus
ENSFALG00000008775	PDCD11	99	56.471	ENSMICG00000012421	PDCD11	99	56.471	Microcebus_murinus
ENSFALG00000008775	PDCD11	99	54.570	ENSMOCG00000021792	Pdcd11	99	54.198	Microtus_ochrogaster
ENSFALG00000008775	PDCD11	99	40.235	ENSMMOG00000007572	pdcd11	98	42.431	Mola_mola
ENSFALG00000008775	PDCD11	100	51.958	ENSMODG00000011077	PDCD11	100	51.693	Monodelphis_domestica
ENSFALG00000008775	PDCD11	99	38.739	ENSMALG00000003859	pdcd11	98	42.060	Monopterus_albus
ENSFALG00000008775	PDCD11	99	55.013	MGP_CAROLIEiJ_G0023050	Pdcd11	99	55.282	Mus_caroli
ENSFALG00000008775	PDCD11	99	55.051	ENSMUSG00000025047	Pdcd11	99	54.949	Mus_musculus
ENSFALG00000008775	PDCD11	99	55.093	MGP_PahariEiJ_G0014540	Pdcd11	99	55.200	Mus_pahari
ENSFALG00000008775	PDCD11	99	55.110	MGP_SPRETEiJ_G0023971	Pdcd11	99	55.115	Mus_spretus
ENSFALG00000008775	PDCD11	99	55.325	ENSMPUG00000016829	PDCD11	99	55.911	Mustela_putorius_furo
ENSFALG00000008775	PDCD11	99	55.786	ENSMLUG00000004997	PDCD11	99	55.892	Myotis_lucifugus
ENSFALG00000008775	PDCD11	99	55.431	ENSNGAG00000018143	Pdcd11	99	55.485	Nannospalax_galili
ENSFALG00000008775	PDCD11	85	55.325	ENSNBRG00000021596	pdcd11	98	51.117	Neolamprologus_brichardi
ENSFALG00000008775	PDCD11	99	53.989	ENSNLEG00000026700	PDCD11	99	54.043	Nomascus_leucogenys
ENSFALG00000008775	PDCD11	71	77.056	ENSMEUG00000013719	-	70	77.056	Notamacropus_eugenii
ENSFALG00000008775	PDCD11	99	53.482	ENSOPRG00000010593	PDCD11	99	53.323	Ochotona_princeps
ENSFALG00000008775	PDCD11	99	54.652	ENSODEG00000008079	PDCD11	99	54.120	Octodon_degus
ENSFALG00000008775	PDCD11	99	44.818	ENSONIG00000018835	pdcd11	99	44.902	Oreochromis_niloticus
ENSFALG00000008775	PDCD11	99	54.731	ENSOANG00000001636	-	99	54.677	Ornithorhynchus_anatinus
ENSFALG00000008775	PDCD11	99	55.308	ENSOCUG00000006312	PDCD11	99	55.202	Oryctolagus_cuniculus
ENSFALG00000008775	PDCD11	99	45.849	ENSORLG00020003642	pdcd11	99	45.903	Oryzias_latipes_hni
ENSFALG00000008775	PDCD11	100	45.395	ENSORLG00015001618	pdcd11	100	45.450	Oryzias_latipes_hsok
ENSFALG00000008775	PDCD11	74	47.285	ENSOMEG00000010904	pdcd11	98	47.329	Oryzias_melastigma
ENSFALG00000008775	PDCD11	99	56.230	ENSOGAG00000008683	PDCD11	99	56.177	Otolemur_garnettii
ENSFALG00000008775	PDCD11	99	54.777	ENSOARG00000003719	PDCD11	100	54.724	Ovis_aries
ENSFALG00000008775	PDCD11	99	56.516	ENSPPAG00000024593	PDCD11	99	55.849	Pan_paniscus
ENSFALG00000008775	PDCD11	99	56.157	ENSPPRG00000015133	PDCD11	99	56.316	Panthera_pardus
ENSFALG00000008775	PDCD11	99	56.247	ENSPTIG00000011433	PDCD11	99	56.406	Panthera_tigris_altaica
ENSFALG00000008775	PDCD11	99	55.957	ENSPTRG00000002911	PDCD11	99	55.378	Pan_troglodytes
ENSFALG00000008775	PDCD11	99	55.964	ENSPANG00000020959	PDCD11	99	55.378	Papio_anubis
ENSFALG00000008775	PDCD11	99	46.033	ENSPKIG00000000973	pdcd11	99	45.754	Paramormyrops_kingsleyae
ENSFALG00000008775	PDCD11	79	65.631	ENSPSIG00000005102	PDCD11	95	65.769	Pelodiscus_sinensis
ENSFALG00000008775	PDCD11	75	49.372	ENSPMGG00000007289	pdcd11	96	64.748	Periophthalmus_magnuspinnatus
ENSFALG00000008775	PDCD11	99	55.059	ENSPEMG00000010315	Pdcd11	99	55.005	Peromyscus_maniculatus_bairdii
ENSFALG00000008775	PDCD11	99	40.609	ENSPMAG00000003098	pdcd11	99	41.053	Petromyzon_marinus
ENSFALG00000008775	PDCD11	100	54.627	ENSPCIG00000001118	PDCD11	100	54.680	Phascolarctos_cinereus
ENSFALG00000008775	PDCD11	99	45.705	ENSPFOG00000006012	pdcd11	99	45.680	Poecilia_formosa
ENSFALG00000008775	PDCD11	99	43.328	ENSPLAG00000014494	pdcd11	99	43.274	Poecilia_latipinna
ENSFALG00000008775	PDCD11	94	54.565	ENSPMEG00000018177	pdcd11	97	53.814	Poecilia_mexicana
ENSFALG00000008775	PDCD11	99	45.606	ENSPREG00000000475	pdcd11	99	45.499	Poecilia_reticulata
ENSFALG00000008775	PDCD11	99	55.085	ENSPPYG00000002621	PDCD11	99	54.237	Pongo_abelii
ENSFALG00000008775	PDCD11	67	53.704	ENSPCAG00000011663	PDCD11	69	53.704	Procavia_capensis
ENSFALG00000008775	PDCD11	99	50.383	ENSPCOG00000023327	PDCD11	99	50.383	Propithecus_coquereli
ENSFALG00000008775	PDCD11	99	55.343	ENSPVAG00000004176	PDCD11	99	54.758	Pteropus_vampyrus
ENSFALG00000008775	PDCD11	99	44.927	ENSPNYG00000003979	pdcd11	99	45.065	Pundamilia_nyererei
ENSFALG00000008775	PDCD11	95	44.994	ENSPNAG00000017225	pdcd11	100	45.285	Pygocentrus_nattereri
ENSFALG00000008775	PDCD11	99	55.024	ENSRNOG00000020304	Pdcd11	99	55.024	Rattus_norvegicus
ENSFALG00000008775	PDCD11	99	55.751	ENSRBIG00000011889	PDCD11	99	55.165	Rhinopithecus_bieti
ENSFALG00000008775	PDCD11	99	55.804	ENSRROG00000030483	PDCD11	99	55.218	Rhinopithecus_roxellana
ENSFALG00000008775	PDCD11	99	30.769	YMR229C	-	91	47.407	Saccharomyces_cerevisiae
ENSFALG00000008775	PDCD11	99	54.426	ENSSBOG00000030308	PDCD11	100	54.426	Saimiri_boliviensis_boliviensis
ENSFALG00000008775	PDCD11	100	54.290	ENSSHAG00000018258	PDCD11	100	54.237	Sarcophilus_harrisii
ENSFALG00000008775	PDCD11	99	48.148	ENSSFOG00015003881	pdcd11	99	48.096	Scleropages_formosus
ENSFALG00000008775	PDCD11	99	46.162	ENSSMAG00000006612	pdcd11	99	46.104	Scophthalmus_maximus
ENSFALG00000008775	PDCD11	96	48.132	ENSSDUG00000021302	pdcd11	99	48.132	Seriola_dumerili
ENSFALG00000008775	PDCD11	79	72.727	ENSSARG00000002540	PDCD11	73	72.727	Sorex_araneus
ENSFALG00000008775	PDCD11	97	45.253	ENSSPAG00000017558	pdcd11	100	45.228	Stegastes_partitus
ENSFALG00000008775	PDCD11	99	56.499	ENSSSCG00000010599	PDCD11	99	57.063	Sus_scrofa
ENSFALG00000008775	PDCD11	70	41.565	ENSTRUG00000014291	pdcd11	99	41.508	Takifugu_rubripes
ENSFALG00000008775	PDCD11	99	44.575	ENSTNIG00000012085	pdcd11	99	44.522	Tetraodon_nigroviridis
ENSFALG00000008775	PDCD11	99	52.548	ENSTBEG00000001893	PDCD11	99	52.442	Tupaia_belangeri
ENSFALG00000008775	PDCD11	99	52.623	ENSTTRG00000003356	PDCD11	95	78.058	Tursiops_truncatus
ENSFALG00000008775	PDCD11	99	55.284	ENSUAMG00000018015	PDCD11	99	55.603	Ursus_americanus
ENSFALG00000008775	PDCD11	99	54.478	ENSUMAG00000023567	PDCD11	99	54.502	Ursus_maritimus
ENSFALG00000008775	PDCD11	75	53.100	ENSVPAG00000007405	PDCD11	82	53.100	Vicugna_pacos
ENSFALG00000008775	PDCD11	99	55.485	ENSVVUG00000004457	PDCD11	99	55.485	Vulpes_vulpes
ENSFALG00000008775	PDCD11	100	51.637	ENSXETG00000009482	pdcd11	100	51.191	Xenopus_tropicalis
ENSFALG00000008775	PDCD11	99	40.043	ENSXCOG00000012420	pdcd11	99	39.913	Xiphophorus_couchianus
ENSFALG00000008775	PDCD11	99	45.901	ENSXMAG00000004638	pdcd11	99	45.955	Xiphophorus_maculatus