EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000009044 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 479 bases
Position: chrJH603526.1:89142-89620
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000009434	zf-C2H2	PF00096.26	1.5e-21	1	4
ENSFALP00000009434	zf-C2H2	PF00096.26	1.5e-21	2	4
ENSFALP00000009434	zf-C2H2	PF00096.26	1.5e-21	3	4
ENSFALP00000009434	zf-C2H2	PF00096.26	1.5e-21	4	4
ENSFALP00000009431	zf-C2H2	PF00096.26	4.8e-17	1	3
ENSFALP00000009431	zf-C2H2	PF00096.26	4.8e-17	2	3
ENSFALP00000009431	zf-C2H2	PF00096.26	4.8e-17	3	3
ENSFALP00000009434	zf-met	PF12874.7	5.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000009471	-	252	-	ENSFALP00000009431	84 (aa)	-	U3K327
ENSFALT00000009474	-	348	-	ENSFALP00000009434	116 (aa)	-	U3K330

Gene Model

Click here to download ENSFALG00000009044's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000009044's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000009044	-	100	47.561	ENSFALG00000001479	GFI1B	53	47.561
ENSFALG00000009044	-	100	42.857	ENSFALG00000012974	-	61	38.739
ENSFALG00000009044	-	100	49.383	ENSFALG00000014292	ZNF319	88	49.383
ENSFALG00000009044	-	100	42.857	ENSFALG00000005762	-	62	38.393
ENSFALG00000009044	-	100	44.444	ENSFALG00000009796	ZBTB48	63	44.444
ENSFALG00000009044	-	100	39.623	ENSFALG00000005718	SCRT2	56	39.623
ENSFALG00000009044	-	100	46.032	ENSFALG00000008017	-	100	46.032
ENSFALG00000009044	-	100	57.831	ENSFALG00000014367	-	92	57.831
ENSFALG00000009044	-	100	39.623	ENSFALG00000014471	-	88	39.623

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000009044	-	100	51.190	ENSG00000159915	ZNF233	61	51.190	Homo_sapiens
ENSFALG00000009044	-	100	53.571	ENSAMEG00000006122	ZNF233	61	53.571	Ailuropoda_melanoleuca
ENSFALG00000009044	-	100	53.571	ENSCATG00000015076	ZNF233	63	49.091	Cercocebus_atys
ENSFALG00000009044	-	100	53.571	ENSCSAG00000003326	ZNF233	63	53.571	Chlorocebus_sabaeus
ENSFALG00000009044	-	100	51.190	ENSCHOG00000010443	ZNF233	62	48.182	Choloepus_hoffmanni
ENSFALG00000009044	-	100	53.571	ENSCANG00000032081	ZNF233	62	53.571	Colobus_angolensis_palliatus
ENSFALG00000009044	-	100	56.627	ENSCGRG00000015629	-	57	56.627	Cricetulus_griseus_crigri
ENSFALG00000009044	-	100	52.381	ENSDNOG00000038729	ZNF233	54	52.381	Dasypus_novemcinctus
ENSFALG00000009044	-	100	54.762	ENSGGOG00000013940	ZNF233	68	54.762	Gorilla_gorilla
ENSFALG00000009044	-	100	52.381	ENSMFAG00000039215	ZNF233	66	48.182	Macaca_fascicularis
ENSFALG00000009044	-	100	52.381	ENSMMUG00000012797	ZNF233	66	48.182	Macaca_mulatta
ENSFALG00000009044	-	100	50.000	ENSMZEG00005024630	-	82	50.000	Maylandia_zebra
ENSFALG00000009044	-	100	53.571	ENSMICG00000016725	ZNF233	65	53.571	Microcebus_murinus
ENSFALG00000009044	-	100	54.762	MGP_CAROLIEiJ_G0029327	Zfp93	62	54.762	Mus_caroli
ENSFALG00000009044	-	100	54.762	MGP_CAROLIEiJ_G0029326	Zfp108	64	51.852	Mus_caroli
ENSFALG00000009044	-	100	54.217	MGP_CAROLIEiJ_G0029322	Zfp235	61	54.217	Mus_caroli
ENSFALG00000009044	-	100	54.762	ENSMUSG00000030486	Zfp108	58	54.762	Mus_musculus
ENSFALG00000009044	-	100	54.762	ENSMUSG00000055305	Zfp93	65	50.000	Mus_musculus
ENSFALG00000009044	-	100	52.381	ENSMUSG00000068962	Zfp114	54	52.381	Mus_musculus
ENSFALG00000009044	-	100	55.422	ENSMUSG00000047603	Zfp235	61	55.422	Mus_musculus
ENSFALG00000009044	-	100	54.762	MGP_PahariEiJ_G0021178	Zfp93	99	50.000	Mus_pahari
ENSFALG00000009044	-	100	55.422	MGP_PahariEiJ_G0021173	Zfp235	61	55.422	Mus_pahari
ENSFALG00000009044	-	100	54.762	MGP_PahariEiJ_G0021177	Zfp108	59	54.762	Mus_pahari
ENSFALG00000009044	-	100	54.762	MGP_SPRETEiJ_G0030421	-	98	50.000	Mus_spretus
ENSFALG00000009044	-	100	54.762	MGP_SPRETEiJ_G0030420	Zfp108	58	54.762	Mus_spretus
ENSFALG00000009044	-	100	52.381	MGP_SPRETEiJ_G0030417	Zfp114	56	52.381	Mus_spretus
ENSFALG00000009044	-	100	55.422	MGP_SPRETEiJ_G0030416	Zfp235	61	55.422	Mus_spretus
ENSFALG00000009044	-	100	46.429	ENSORLG00015017539	-	68	46.429	Oryzias_latipes_hsok
ENSFALG00000009044	-	100	53.571	ENSOGAG00000001912	ZNF233	56	53.571	Otolemur_garnettii
ENSFALG00000009044	-	100	53.571	ENSPPAG00000030145	ZNF233	62	53.571	Pan_paniscus
ENSFALG00000009044	-	100	53.571	ENSPTRG00000011111	ZNF233	62	53.571	Pan_troglodytes
ENSFALG00000009044	-	100	53.571	ENSPANG00000010670	ZNF233	60	53.571	Papio_anubis
ENSFALG00000009044	-	100	53.571	ENSPEMG00000018022	-	67	50.000	Peromyscus_maniculatus_bairdii
ENSFALG00000009044	-	100	53.571	ENSPPYG00000010085	ZNF233	64	53.571	Pongo_abelii
ENSFALG00000009044	-	100	54.762	ENSPCOG00000015292	ZNF233	63	54.762	Propithecus_coquereli
ENSFALG00000009044	-	100	50.000	ENSPVAG00000004388	ZNF233	56	50.000	Pteropus_vampyrus
ENSFALG00000009044	-	100	53.571	ENSRBIG00000035218	ZNF233	63	53.571	Rhinopithecus_bieti
ENSFALG00000009044	-	100	53.571	ENSRROG00000030619	ZNF233	62	53.571	Rhinopithecus_roxellana
ENSFALG00000009044	-	100	53.571	ENSTTRG00000011818	ZNF233	62	53.571	Tursiops_truncatus
ENSFALG00000009044	-	100	53.571	ENSUMAG00000023065	ZNF233	68	53.571	Ursus_maritimus
ENSFALG00000009044	-	99	51.351	ENSXMAG00000027300	-	57	51.351	Xiphophorus_maculatus