EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000009072 (Gene tree)
Gene ID: -
Gene Symbol: FAM172A
Alias: C5orf21|DKFZP564D172|Toupee
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 187307 bases
Position: chrJH603277.1:1683350-1870656
Accession: 25365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000009463	Arb2	PF09757.9	6.1e-10	1	1
ENSFALP00000009461	Arb2	PF09757.9	8.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000009501	FAM172A-201	1567	-	ENSFALP00000009461	405 (aa)	-	U3K357
ENSFALT00000009503	FAM172A-202	1181	-	ENSFALP00000009463	372 (aa)	-	U3K359

Gene Model

Click here to download ENSFALG00000009072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000009072's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000009072	FAM172A	84	45.367	ENSFALG00000006501	-	86	45.367

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000009072	FAM172A	95	90.141	ENSG00000113391	FAM172A	88	89.538	Homo_sapiens
ENSFALG00000009072	FAM172A	51	42.408	ENSAPLG00000011555	-	78	42.408	Anas_platyrhynchos
ENSFALG00000009072	FAM172A	99	91.328	ENSAPLG00000004055	FAM172A	89	91.328	Anas_platyrhynchos
ENSFALG00000009072	FAM172A	95	93.220	ENSACAG00000013305	FAM172A	92	93.220	Anolis_carolinensis
ENSFALG00000009072	FAM172A	95	83.616	ENSANAG00000035869	FAM172A	89	82.320	Aotus_nancymaae
ENSFALG00000009072	FAM172A	97	88.301	ENSBTAG00000050195	FAM172A	87	87.879	Bos_taurus
ENSFALG00000009072	FAM172A	95	89.859	ENSCJAG00000010444	FAM172A	87	88.430	Callithrix_jacchus
ENSFALG00000009072	FAM172A	96	88.827	ENSCAFG00000008064	FAM172A	98	88.398	Canis_familiaris
ENSFALG00000009072	FAM172A	97	88.858	ENSCAFG00020006210	FAM172A	94	87.452	Canis_lupus_dingo
ENSFALG00000009072	FAM172A	97	88.301	ENSCHIG00000008440	FAM172A	87	87.879	Capra_hircus
ENSFALG00000009072	FAM172A	72	87.970	ENSTSYG00000006286	FAM172A	85	87.970	Carlito_syrichta
ENSFALG00000009072	FAM172A	59	85.321	ENSCAPG00000014103	-	100	85.321	Cavia_aperea
ENSFALG00000009072	FAM172A	95	89.577	ENSCCAG00000023116	FAM172A	92	86.667	Cebus_capucinus
ENSFALG00000009072	FAM172A	97	87.569	ENSCLAG00000005472	FAM172A	94	88.608	Chinchilla_lanigera
ENSFALG00000009072	FAM172A	86	44.377	ENSCPBG00000004402	-	87	43.787	Chrysemys_picta_bellii
ENSFALG00000009072	FAM172A	73	87.037	ENSCANG00000040412	FAM172A	92	87.037	Colobus_angolensis_palliatus
ENSFALG00000009072	FAM172A	97	88.301	ENSDNOG00000004689	FAM172A	87	87.879	Dasypus_novemcinctus
ENSFALG00000009072	FAM172A	73	86.667	ENSDORG00000013558	Fam172a	89	86.397	Dipodomys_ordii
ENSFALG00000009072	FAM172A	84	40.385	ENSEBUG00000016097	-	58	40.385	Eptatretus_burgeri
ENSFALG00000009072	FAM172A	95	87.606	ENSECAG00000018274	FAM172A	95	87.324	Equus_caballus
ENSFALG00000009072	FAM172A	95	76.620	ENSEEUG00000002887	FAM172A	85	76.620	Erinaceus_europaeus
ENSFALG00000009072	FAM172A	97	71.074	ENSELUG00000017647	fam172a	85	71.074	Esox_lucius
ENSFALG00000009072	FAM172A	97	88.301	ENSFCAG00000025443	FAM172A	87	87.879	Felis_catus
ENSFALG00000009072	FAM172A	99	92.141	ENSGALG00000014661	FAM172A	86	94.382	Gallus_gallus
ENSFALG00000009072	FAM172A	85	45.000	ENSGAGG00000022828	-	86	44.377	Gopherus_agassizii
ENSFALG00000009072	FAM172A	99	92.643	ENSGAGG00000003839	FAM172A	88	92.643	Gopherus_agassizii
ENSFALG00000009072	FAM172A	95	89.577	ENSGGOG00000010296	FAM172A	92	86.667	Gorilla_gorilla
ENSFALG00000009072	FAM172A	95	89.014	ENSHGLG00000011178	FAM172A	85	89.873	Heterocephalus_glaber_female
ENSFALG00000009072	FAM172A	95	88.952	ENSHGLG00100013340	FAM172A	100	89.873	Heterocephalus_glaber_male
ENSFALG00000009072	FAM172A	97	88.022	ENSSTOG00000009918	FAM172A	87	87.603	Ictidomys_tridecemlineatus
ENSFALG00000009072	FAM172A	88	47.273	ENSLACG00000001532	si:ch73-41e3.7	87	47.273	Latimeria_chalumnae
ENSFALG00000009072	FAM172A	98	78.788	ENSLOCG00000001629	fam172a	87	79.614	Lepisosteus_oculatus
ENSFALG00000009072	FAM172A	73	87.037	ENSMFAG00000001171	FAM172A	92	87.037	Macaca_fascicularis
ENSFALG00000009072	FAM172A	90	89.583	ENSMNEG00000039938	FAM172A	92	87.037	Macaca_nemestrina
ENSFALG00000009072	FAM172A	98	88.430	ENSMICG00000030403	FAM172A	87	88.430	Microcebus_murinus
ENSFALG00000009072	FAM172A	87	87.385	ENSMOCG00000003613	Fam172a	88	87.385	Microtus_ochrogaster
ENSFALG00000009072	FAM172A	95	90.423	ENSMODG00000020131	FAM172A	85	90.423	Monodelphis_domestica
ENSFALG00000009072	FAM172A	66	86.631	MGP_PahariEiJ_G0015818	Fam172a	85	86.631	Mus_pahari
ENSFALG00000009072	FAM172A	87	89.538	ENSNGAG00000019570	Fam172a	88	89.538	Nannospalax_galili
ENSFALG00000009072	FAM172A	73	87.037	ENSNLEG00000013903	FAM172A	89	87.037	Nomascus_leucogenys
ENSFALG00000009072	FAM172A	98	88.525	ENSOANG00000011068	FAM172A	98	88.525	Ornithorhynchus_anatinus
ENSFALG00000009072	FAM172A	95	89.014	ENSOCUG00000007299	FAM172A	86	87.603	Oryctolagus_cuniculus
ENSFALG00000009072	FAM172A	95	88.451	ENSOGAG00000015189	FAM172A	87	87.052	Otolemur_garnettii
ENSFALG00000009072	FAM172A	96	88.235	ENSOARG00000016711	FAM172A	85	85.294	Ovis_aries
ENSFALG00000009072	FAM172A	73	86.667	ENSPPAG00000030542	FAM172A	92	86.667	Pan_paniscus
ENSFALG00000009072	FAM172A	97	88.301	ENSPPRG00000006653	FAM172A	87	87.879	Panthera_pardus
ENSFALG00000009072	FAM172A	97	88.301	ENSPTIG00000012681	FAM172A	87	87.879	Panthera_tigris_altaica
ENSFALG00000009072	FAM172A	73	86.667	ENSPTRG00000017074	FAM172A	92	86.667	Pan_troglodytes
ENSFALG00000009072	FAM172A	73	87.037	ENSPANG00000011687	FAM172A	92	87.037	Papio_anubis
ENSFALG00000009072	FAM172A	99	74.255	ENSPKIG00000012314	fam172a	95	73.315	Paramormyrops_kingsleyae
ENSFALG00000009072	FAM172A	95	87.887	ENSPEMG00000009604	-	85	87.887	Peromyscus_maniculatus_bairdii
ENSFALG00000009072	FAM172A	99	86.992	ENSPCIG00000028612	FAM172A	89	86.992	Phascolarctos_cinereus
ENSFALG00000009072	FAM172A	72	84.758	ENSRNOG00000013844	Fam172a	99	84.758	Rattus_norvegicus
ENSFALG00000009072	FAM172A	73	87.037	ENSRROG00000023807	FAM172A	92	87.037	Rhinopithecus_roxellana
ENSFALG00000009072	FAM172A	95	89.577	ENSSBOG00000019860	FAM172A	92	88.089	Saimiri_boliviensis_boliviensis
ENSFALG00000009072	FAM172A	95	89.577	ENSSHAG00000013743	FAM172A	85	89.577	Sarcophilus_harrisii
ENSFALG00000009072	FAM172A	99	90.463	ENSSPUG00000008161	FAM172A	88	90.463	Sphenodon_punctatus
ENSFALG00000009072	FAM172A	98	88.430	ENSSSCG00000027608	FAM172A	95	88.398	Sus_scrofa
ENSFALG00000009072	FAM172A	90	99.701	ENSTGUG00000000715	FAM172A	88	99.701	Taeniopygia_guttata
ENSFALG00000009072	FAM172A	83	46.624	ENSTGUG00000013623	-	93	46.624	Taeniopygia_guttata
ENSFALG00000009072	FAM172A	89	56.587	ENSTNIG00000009902	fam172a	100	58.631	Tetraodon_nigroviridis
ENSFALG00000009072	FAM172A	98	86.501	ENSTTRG00000001521	FAM172A	87	86.501	Tursiops_truncatus
ENSFALG00000009072	FAM172A	97	88.858	ENSUMAG00000005442	FAM172A	97	87.879	Ursus_maritimus
ENSFALG00000009072	FAM172A	97	88.858	ENSVVUG00000022112	FAM172A	96	88.430	Vulpes_vulpes
ENSFALG00000009072	FAM172A	90	43.491	ENSXETG00000033027	-	88	43.491	Xenopus_tropicalis
ENSFALG00000009072	FAM172A	99	81.351	ENSXETG00000011592	fam172a	88	81.351	Xenopus_tropicalis