EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000009273 (Gene tree)
Gene ID: -
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 21023 bases
Position: chrJH603179.1:12351492-12372514
Accession: 101820365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000009668	ResIII	PF04851.15	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000009708	SBNO1-201	4330	-	ENSFALP00000009668	1391 (aa)	XP_005055205	U3K3R4

Gene Model

Click here to download ENSFALG00000009273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000009273's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000009273	SBNO1	70	68.966	ENSFALG00000013988	SBNO2	68	68.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000009273	SBNO1	100	92.175	ENSG00000139697	SBNO1	100	92.098	Homo_sapiens
ENSFALG00000009273	SBNO1	82	81.385	ENSAPOG00000003196	sbno1	96	81.498	Acanthochromis_polyacanthus
ENSFALG00000009273	SBNO1	100	91.840	ENSAMEG00000015151	SBNO1	100	91.762	Ailuropoda_melanoleuca
ENSFALG00000009273	SBNO1	99	75.212	ENSACIG00000008088	sbno1	98	75.090	Amphilophus_citrinellus
ENSFALG00000009273	SBNO1	99	75.830	ENSAOCG00000014859	sbno1	97	75.627	Amphiprion_ocellaris
ENSFALG00000009273	SBNO1	99	75.830	ENSAPEG00000006069	sbno1	97	75.627	Amphiprion_percula
ENSFALG00000009273	SBNO1	99	76.885	ENSATEG00000006667	sbno1	98	76.479	Anabas_testudineus
ENSFALG00000009273	SBNO1	100	98.634	ENSAPLG00000015674	SBNO1	100	98.634	Anas_platyrhynchos
ENSFALG00000009273	SBNO1	100	90.825	ENSACAG00000015441	SBNO1	88	90.754	Anolis_carolinensis
ENSFALG00000009273	SBNO1	100	91.966	ENSANAG00000029958	-	99	95.118	Aotus_nancymaae
ENSFALG00000009273	SBNO1	99	75.036	ENSACLG00000024913	sbno1	98	74.873	Astatotilapia_calliptera
ENSFALG00000009273	SBNO1	99	79.929	ENSAMXG00000019473	sbno1	98	79.956	Astyanax_mexicanus
ENSFALG00000009273	SBNO1	99	91.960	ENSBTAG00000020505	SBNO1	98	92.240	Bos_taurus
ENSFALG00000009273	SBNO1	100	91.966	ENSCJAG00000016599	SBNO1	100	91.888	Callithrix_jacchus
ENSFALG00000009273	SBNO1	100	91.905	ENSCAFG00000007503	SBNO1	97	95.635	Canis_familiaris
ENSFALG00000009273	SBNO1	100	91.176	ENSCAFG00020015363	SBNO1	99	92.767	Canis_lupus_dingo
ENSFALG00000009273	SBNO1	99	92.026	ENSCHIG00000008382	SBNO1	97	95.437	Capra_hircus
ENSFALG00000009273	SBNO1	100	92.396	ENSTSYG00000012749	SBNO1	100	92.319	Carlito_syrichta
ENSFALG00000009273	SBNO1	96	92.267	ENSCAPG00000000384	SBNO1	99	94.937	Cavia_aperea
ENSFALG00000009273	SBNO1	100	91.744	ENSCPOG00000008109	SBNO1	99	94.937	Cavia_porcellus
ENSFALG00000009273	SBNO1	100	87.670	ENSCCAG00000035316	SBNO1	100	87.590	Cebus_capucinus
ENSFALG00000009273	SBNO1	99	90.504	ENSCATG00000008239	SBNO1	98	95.479	Cercocebus_atys
ENSFALG00000009273	SBNO1	100	92.037	ENSCLAG00000008995	SBNO1	99	95.298	Chinchilla_lanigera
ENSFALG00000009273	SBNO1	83	93.960	ENSCSAG00000002064	SBNO1	100	93.782	Chlorocebus_sabaeus
ENSFALG00000009273	SBNO1	96	88.750	ENSCHOG00000008814	SBNO1	96	88.643	Choloepus_hoffmanni
ENSFALG00000009273	SBNO1	100	95.471	ENSCPBG00000025968	SBNO1	99	95.471	Chrysemys_picta_bellii
ENSFALG00000009273	SBNO1	100	87.168	ENSCANG00000042688	-	100	86.944	Colobus_angolensis_palliatus
ENSFALG00000009273	SBNO1	100	91.535	ENSCGRG00001017470	Sbno1	99	94.394	Cricetulus_griseus_chok1gshd
ENSFALG00000009273	SBNO1	100	91.535	ENSCGRG00000004756	Sbno1	99	94.394	Cricetulus_griseus_crigri
ENSFALG00000009273	SBNO1	99	74.859	ENSCSEG00000011919	sbno1	98	75.591	Cynoglossus_semilaevis
ENSFALG00000009273	SBNO1	99	75.723	ENSCVAG00000007038	sbno1	98	76.132	Cyprinodon_variegatus
ENSFALG00000009273	SBNO1	99	79.342	ENSDARG00000099080	sbno1	98	79.506	Danio_rerio
ENSFALG00000009273	SBNO1	100	89.574	ENSDNOG00000017147	SBNO1	98	91.675	Dasypus_novemcinctus
ENSFALG00000009273	SBNO1	100	85.366	ENSDORG00000015261	Sbno1	99	91.712	Dipodomys_ordii
ENSFALG00000009273	SBNO1	93	85.893	ENSETEG00000005620	SBNO1	93	85.893	Echinops_telfairi
ENSFALG00000009273	SBNO1	75	62.732	ENSEBUG00000013823	sbno1	93	61.776	Eptatretus_burgeri
ENSFALG00000009273	SBNO1	51	87.712	ENSEASG00005012595	-	92	88.559	Equus_asinus_asinus
ENSFALG00000009273	SBNO1	100	92.253	ENSECAG00000006127	SBNO1	100	92.175	Equus_caballus
ENSFALG00000009273	SBNO1	83	92.308	ENSEEUG00000003793	SBNO1	83	92.308	Erinaceus_europaeus
ENSFALG00000009273	SBNO1	99	78.224	ENSELUG00000002886	sbno1	98	78.105	Esox_lucius
ENSFALG00000009273	SBNO1	99	92.319	ENSFCAG00000015331	SBNO1	99	92.241	Felis_catus
ENSFALG00000009273	SBNO1	99	90.302	ENSFDAG00000014232	SBNO1	99	90.942	Fukomys_damarensis
ENSFALG00000009273	SBNO1	99	76.433	ENSFHEG00000007360	sbno1	98	76.640	Fundulus_heteroclitus
ENSFALG00000009273	SBNO1	94	79.237	ENSGMOG00000018229	sbno1	98	79.396	Gadus_morhua
ENSFALG00000009273	SBNO1	88	98.698	ENSGALG00000003392	SBNO1	99	98.698	Gallus_gallus
ENSFALG00000009273	SBNO1	99	76.466	ENSGAFG00000003960	sbno1	98	76.652	Gambusia_affinis
ENSFALG00000009273	SBNO1	94	79.224	ENSGACG00000015633	sbno1	98	78.886	Gasterosteus_aculeatus
ENSFALG00000009273	SBNO1	100	94.824	ENSGAGG00000001065	SBNO1	99	97.468	Gopherus_agassizii
ENSFALG00000009273	SBNO1	100	92.103	ENSGGOG00000015000	SBNO1	99	95.479	Gorilla_gorilla
ENSFALG00000009273	SBNO1	99	69.450	ENSHBUG00000011910	sbno1	98	69.203	Haplochromis_burtoni
ENSFALG00000009273	SBNO1	100	91.894	ENSHGLG00000014165	-	99	94.937	Heterocephalus_glaber_female
ENSFALG00000009273	SBNO1	91	85.573	ENSHCOG00000003246	sbno1	95	85.573	Hippocampus_comes
ENSFALG00000009273	SBNO1	99	79.487	ENSIPUG00000015830	Sbno1	98	78.862	Ictalurus_punctatus
ENSFALG00000009273	SBNO1	100	92.175	ENSSTOG00000023221	SBNO1	99	95.118	Ictidomys_tridecemlineatus
ENSFALG00000009273	SBNO1	100	92.324	ENSJJAG00000001741	Sbno1	100	92.032	Jaculus_jaculus
ENSFALG00000009273	SBNO1	99	76.433	ENSKMAG00000009696	sbno1	98	76.525	Kryptolebias_marmoratus
ENSFALG00000009273	SBNO1	99	76.392	ENSLBEG00000007623	sbno1	98	76.071	Labrus_bergylta
ENSFALG00000009273	SBNO1	99	82.761	ENSLACG00000017227	SBNO1	99	85.251	Latimeria_chalumnae
ENSFALG00000009273	SBNO1	99	82.374	ENSLOCG00000005725	sbno1	96	82.332	Lepisosteus_oculatus
ENSFALG00000009273	SBNO1	100	91.248	ENSLAFG00000002135	SBNO1	100	91.170	Loxodonta_africana
ENSFALG00000009273	SBNO1	100	92.324	ENSMFAG00000031429	SBNO1	100	92.032	Macaca_fascicularis
ENSFALG00000009273	SBNO1	100	92.391	ENSMMUG00000011496	SBNO1	100	92.098	Macaca_mulatta
ENSFALG00000009273	SBNO1	100	90.746	ENSMLEG00000033260	SBNO1	99	95.479	Mandrillus_leucophaeus
ENSFALG00000009273	SBNO1	99	76.885	ENSMAMG00000005473	sbno1	98	76.813	Mastacembelus_armatus
ENSFALG00000009273	SBNO1	100	98.778	ENSMGAG00000003274	SBNO1	100	98.778	Meleagris_gallopavo
ENSFALG00000009273	SBNO1	50	87.393	ENSMAUG00000004834	-	100	87.822	Mesocricetus_auratus
ENSFALG00000009273	SBNO1	100	91.033	ENSMICG00000006573	-	99	92.224	Microcebus_murinus
ENSFALG00000009273	SBNO1	95	95.144	ENSMOCG00000009390	Sbno1	99	95.118	Microtus_ochrogaster
ENSFALG00000009273	SBNO1	99	72.979	ENSMMOG00000008691	sbno1	97	72.086	Mola_mola
ENSFALG00000009273	SBNO1	99	93.386	ENSMODG00000012470	SBNO1	98	93.386	Monodelphis_domestica
ENSFALG00000009273	SBNO1	99	75.758	ENSMALG00000001056	sbno1	98	75.214	Monopterus_albus
ENSFALG00000009273	SBNO1	99	91.810	MGP_CAROLIEiJ_G0027749	Sbno1	95	96.930	Mus_caroli
ENSFALG00000009273	SBNO1	99	91.810	ENSMUSG00000038095	Sbno1	94	96.930	Mus_musculus
ENSFALG00000009273	SBNO1	99	92.158	MGP_PahariEiJ_G0024329	Sbno1	95	96.930	Mus_pahari
ENSFALG00000009273	SBNO1	99	91.667	MGP_SPRETEiJ_G0028747	Sbno1	95	96.930	Mus_spretus
ENSFALG00000009273	SBNO1	100	92.324	ENSMPUG00000001658	SBNO1	100	92.247	Mustela_putorius_furo
ENSFALG00000009273	SBNO1	100	91.894	ENSMLUG00000017159	SBNO1	100	91.816	Myotis_lucifugus
ENSFALG00000009273	SBNO1	100	92.109	ENSNGAG00000012620	Sbno1	98	95.464	Nannospalax_galili
ENSFALG00000009273	SBNO1	99	74.911	ENSNBRG00000019189	sbno1	98	74.673	Neolamprologus_brichardi
ENSFALG00000009273	SBNO1	100	88.514	ENSNLEG00000001502	SBNO1	99	89.466	Nomascus_leucogenys
ENSFALG00000009273	SBNO1	67	77.766	ENSMEUG00000008768	-	93	85.350	Notamacropus_eugenii
ENSFALG00000009273	SBNO1	100	89.677	ENSOPRG00000011054	SBNO1	100	89.598	Ochotona_princeps
ENSFALG00000009273	SBNO1	100	92.247	ENSODEG00000009997	SBNO1	99	94.937	Octodon_degus
ENSFALG00000009273	SBNO1	99	76.231	ENSONIG00000015348	sbno1	98	76.160	Oreochromis_niloticus
ENSFALG00000009273	SBNO1	98	91.028	ENSOCUG00000002441	SBNO1	93	92.051	Oryctolagus_cuniculus
ENSFALG00000009273	SBNO1	99	75.617	ENSORLG00000001593	sbno1	99	75.018	Oryzias_latipes
ENSFALG00000009273	SBNO1	99	75.670	ENSORLG00020015216	sbno1	98	75.287	Oryzias_latipes_hni
ENSFALG00000009273	SBNO1	99	75.811	ENSORLG00015002726	sbno1	98	75.359	Oryzias_latipes_hsok
ENSFALG00000009273	SBNO1	99	75.760	ENSOMEG00000019313	sbno1	98	75.270	Oryzias_melastigma
ENSFALG00000009273	SBNO1	50	84.670	ENSOGAG00000010781	-	100	85.530	Otolemur_garnettii
ENSFALG00000009273	SBNO1	99	91.822	ENSOARG00000004404	SBNO1	98	92.099	Ovis_aries
ENSFALG00000009273	SBNO1	100	91.966	ENSPPAG00000024635	SBNO1	99	95.298	Pan_paniscus
ENSFALG00000009273	SBNO1	99	92.319	ENSPPRG00000022092	SBNO1	99	92.241	Panthera_pardus
ENSFALG00000009273	SBNO1	100	91.750	ENSPTIG00000017803	SBNO1	100	91.960	Panthera_tigris_altaica
ENSFALG00000009273	SBNO1	100	92.037	ENSPTRG00000005597	SBNO1	99	95.479	Pan_troglodytes
ENSFALG00000009273	SBNO1	100	92.175	ENSPANG00000011640	SBNO1	99	95.479	Papio_anubis
ENSFALG00000009273	SBNO1	99	81.558	ENSPKIG00000001441	sbno1	98	81.500	Paramormyrops_kingsleyae
ENSFALG00000009273	SBNO1	100	94.993	ENSPSIG00000009572	-	100	94.993	Pelodiscus_sinensis
ENSFALG00000009273	SBNO1	92	90.824	ENSPSIG00000009256	-	100	90.513	Pelodiscus_sinensis
ENSFALG00000009273	SBNO1	100	91.463	ENSPEMG00000016087	Sbno1	99	94.394	Peromyscus_maniculatus_bairdii
ENSFALG00000009273	SBNO1	99	93.103	ENSPCIG00000010985	SBNO1	99	93.319	Phascolarctos_cinereus
ENSFALG00000009273	SBNO1	99	76.695	ENSPFOG00000005069	sbno1	98	76.956	Poecilia_formosa
ENSFALG00000009273	SBNO1	99	76.554	ENSPLAG00000015015	sbno1	98	76.884	Poecilia_latipinna
ENSFALG00000009273	SBNO1	99	76.641	ENSPMEG00000021212	sbno1	98	76.973	Poecilia_mexicana
ENSFALG00000009273	SBNO1	99	76.147	ENSPREG00000017746	sbno1	98	76.471	Poecilia_reticulata
ENSFALG00000009273	SBNO1	100	91.888	ENSPPYG00000005084	SBNO1	100	91.307	Pongo_abelii
ENSFALG00000009273	SBNO1	84	90.991	ENSPCAG00000008634	SBNO1	88	87.879	Procavia_capensis
ENSFALG00000009273	SBNO1	100	92.253	ENSPCOG00000024277	SBNO1	99	95.273	Propithecus_coquereli
ENSFALG00000009273	SBNO1	87	94.841	ENSPVAG00000015304	SBNO1	87	94.841	Pteropus_vampyrus
ENSFALG00000009273	SBNO1	99	76.479	ENSPNYG00000004291	sbno1	98	76.197	Pundamilia_nyererei
ENSFALG00000009273	SBNO1	99	79.502	ENSPNAG00000015622	sbno1	98	79.260	Pygocentrus_nattereri
ENSFALG00000009273	SBNO1	99	92.032	ENSRNOG00000001064	Sbno1	99	95.833	Rattus_norvegicus
ENSFALG00000009273	SBNO1	100	92.181	ENSRROG00000034230	SBNO1	99	95.479	Rhinopithecus_roxellana
ENSFALG00000009273	SBNO1	96	87.658	ENSSBOG00000015422	SBNO1	100	87.500	Saimiri_boliviensis_boliviensis
ENSFALG00000009273	SBNO1	99	80.514	ENSSFOG00015019025	sbno1	98	80.772	Scleropages_formosus
ENSFALG00000009273	SBNO1	99	76.412	ENSSMAG00000013640	sbno1	98	76.547	Scophthalmus_maximus
ENSFALG00000009273	SBNO1	99	76.234	ENSSDUG00000023480	sbno1	98	75.983	Seriola_dumerili
ENSFALG00000009273	SBNO1	99	76.164	ENSSLDG00000007928	sbno1	98	75.911	Seriola_lalandi_dorsalis
ENSFALG00000009273	SBNO1	89	91.761	ENSSARG00000002594	SBNO1	89	91.667	Sorex_araneus
ENSFALG00000009273	SBNO1	100	92.380	ENSSPUG00000012640	SBNO1	100	92.380	Sphenodon_punctatus
ENSFALG00000009273	SBNO1	99	75.809	ENSSPAG00000016244	sbno1	98	75.606	Stegastes_partitus
ENSFALG00000009273	SBNO1	100	92.391	ENSSSCG00000009776	SBNO1	100	92.313	Sus_scrofa
ENSFALG00000009273	SBNO1	100	99.641	ENSTGUG00000005380	SBNO1	100	99.641	Taeniopygia_guttata
ENSFALG00000009273	SBNO1	99	76.221	ENSTRUG00000018490	sbno1	98	75.879	Takifugu_rubripes
ENSFALG00000009273	SBNO1	56	71.075	ENSTNIG00000013506	sbno1	99	71.004	Tetraodon_nigroviridis
ENSFALG00000009273	SBNO1	100	92.181	ENSUAMG00000019671	SBNO1	100	92.103	Ursus_americanus
ENSFALG00000009273	SBNO1	100	92.181	ENSUMAG00000004002	SBNO1	100	92.103	Ursus_maritimus
ENSFALG00000009273	SBNO1	95	86.957	ENSVPAG00000007024	SBNO1	92	86.719	Vicugna_pacos
ENSFALG00000009273	SBNO1	100	92.037	ENSVVUG00000027807	SBNO1	100	91.960	Vulpes_vulpes
ENSFALG00000009273	SBNO1	99	83.131	ENSXETG00000031930	SBNO1	98	82.811	Xenopus_tropicalis
ENSFALG00000009273	SBNO1	88	75.220	ENSXCOG00000011607	sbno1	95	75.767	Xiphophorus_couchianus
ENSFALG00000009273	SBNO1	99	76.782	ENSXMAG00000002140	sbno1	98	76.901	Xiphophorus_maculatus