EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000010003 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 9436 bases
Position: chrJH603180.1:13634402-13643837
Accession: 101816699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000010440	SLBP_RNA_bind	PF15247.6	2.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000010482	-	2382	-	ENSFALP00000010440	274 (aa)	XP_005045606	U3K5Y6

Gene Model

Click here to download ENSFALG00000010003's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000010003's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000010003	-	100	67.616	ENSG00000163950	SLBP	100	67.616	Homo_sapiens
ENSFALG00000010003	-	86	50.980	ENSAPOG00000004953	slbp	90	50.980	Acanthochromis_polyacanthus
ENSFALG00000010003	-	79	76.606	ENSAMEG00000016915	SLBP	100	78.440	Ailuropoda_melanoleuca
ENSFALG00000010003	-	84	54.202	ENSACIG00000022308	slbp	92	54.202	Amphilophus_citrinellus
ENSFALG00000010003	-	84	51.200	ENSAOCG00000024545	slbp	88	51.200	Amphiprion_ocellaris
ENSFALG00000010003	-	86	50.584	ENSAPEG00000017629	slbp	90	50.584	Amphiprion_percula
ENSFALG00000010003	-	86	52.529	ENSATEG00000016358	slbp	90	52.529	Anabas_testudineus
ENSFALG00000010003	-	79	90.826	ENSAPLG00000015989	-	100	90.826	Anas_platyrhynchos
ENSFALG00000010003	-	100	64.236	ENSANAG00000034769	SLBP	95	74.222	Aotus_nancymaae
ENSFALG00000010003	-	89	48.669	ENSACLG00000007036	-	94	48.669	Astatotilapia_calliptera
ENSFALG00000010003	-	91	55.303	ENSAMXG00000014527	slbp	96	55.303	Astyanax_mexicanus
ENSFALG00000010003	-	100	68.085	ENSBTAG00000001328	SLBP	100	69.504	Bos_taurus
ENSFALG00000010003	-	100	64.236	ENSCJAG00000001790	SLBP	100	64.236	Callithrix_jacchus
ENSFALG00000010003	-	100	69.039	ENSCAFG00000015016	SLBP	100	69.751	Canis_familiaris
ENSFALG00000010003	-	100	69.039	ENSCAFG00020012334	SLBP	100	69.751	Canis_lupus_dingo
ENSFALG00000010003	-	100	68.794	ENSCHIG00000019364	SLBP	100	70.213	Capra_hircus
ENSFALG00000010003	-	100	67.260	ENSTSYG00000000376	SLBP	100	67.972	Carlito_syrichta
ENSFALG00000010003	-	66	72.527	ENSCAPG00000016340	SLBP	100	74.176	Cavia_aperea
ENSFALG00000010003	-	81	74.222	ENSCPOG00000000031	SLBP	92	69.962	Cavia_porcellus
ENSFALG00000010003	-	100	66.904	ENSCATG00000029173	SLBP	92	75.229	Cercocebus_atys
ENSFALG00000010003	-	82	74.779	ENSCLAG00000008157	SLBP	100	68.953	Chinchilla_lanigera
ENSFALG00000010003	-	100	55.594	ENSCSAG00000015628	SLBP	100	55.594	Chlorocebus_sabaeus
ENSFALG00000010003	-	100	81.720	ENSCPBG00000000746	SLBP	100	82.796	Chrysemys_picta_bellii
ENSFALG00000010003	-	78	74.654	ENSCANG00000041008	SLBP	100	74.654	Colobus_angolensis_palliatus
ENSFALG00000010003	-	100	69.039	ENSCGRG00001009760	-	100	69.395	Cricetulus_griseus_chok1gshd
ENSFALG00000010003	-	100	69.065	ENSCGRG00001012991	-	100	69.424	Cricetulus_griseus_chok1gshd
ENSFALG00000010003	-	100	69.039	ENSCGRG00000004506	Slbp	100	69.395	Cricetulus_griseus_crigri
ENSFALG00000010003	-	83	54.918	ENSCSEG00000020337	-	93	54.086	Cynoglossus_semilaevis
ENSFALG00000010003	-	90	47.727	ENSCVAG00000019592	-	97	47.727	Cyprinodon_variegatus
ENSFALG00000010003	-	89	50.769	ENSDARG00000100558	slbp	85	51.923	Danio_rerio
ENSFALG00000010003	-	100	63.799	ENSDNOG00000047539	SLBP	100	65.233	Dasypus_novemcinctus
ENSFALG00000010003	-	78	76.959	ENSDORG00000003028	Slbp	100	78.802	Dipodomys_ordii
ENSFALG00000010003	-	78	67.890	ENSETEG00000004641	SLBP	99	68.333	Echinops_telfairi
ENSFALG00000010003	-	70	75.648	ENSEASG00005022714	SLBP	100	77.202	Equus_asinus_asinus
ENSFALG00000010003	-	76	71.296	ENSECAG00000011689	SLBP	69	71.296	Equus_caballus
ENSFALG00000010003	-	96	48.763	ENSELUG00000012854	slbp	100	48.763	Esox_lucius
ENSFALG00000010003	-	100	68.683	ENSFCAG00000000169	SLBP	94	76.549	Felis_catus
ENSFALG00000010003	-	84	74.459	ENSFDAG00000007592	SLBP	99	72.093	Fukomys_damarensis
ENSFALG00000010003	-	90	48.148	ENSFHEG00000007497	slbp	97	50.000	Fundulus_heteroclitus
ENSFALG00000010003	-	52	70.000	ENSGMOG00000015352	slbp	96	63.333	Gadus_morhua
ENSFALG00000010003	-	100	83.942	ENSGALG00000015712	SLBP	100	83.942	Gallus_gallus
ENSFALG00000010003	-	84	50.403	ENSGAFG00000019577	slbp	89	50.403	Gambusia_affinis
ENSFALG00000010003	-	87	50.000	ENSGACG00000019596	slbp	93	50.000	Gasterosteus_aculeatus
ENSFALG00000010003	-	86	84.454	ENSGAGG00000012096	SLBP	97	84.454	Gopherus_agassizii
ENSFALG00000010003	-	100	67.616	ENSGGOG00000003167	SLBP	100	67.616	Gorilla_gorilla
ENSFALG00000010003	-	89	48.669	ENSHBUG00000003338	-	94	48.669	Haplochromis_burtoni
ENSFALG00000010003	-	91	61.905	ENSHGLG00000008313	-	100	58.029	Heterocephalus_glaber_female
ENSFALG00000010003	-	72	73.232	ENSHGLG00000005955	-	100	61.682	Heterocephalus_glaber_female
ENSFALG00000010003	-	84	68.398	ENSHGLG00000010461	-	96	66.667	Heterocephalus_glaber_female
ENSFALG00000010003	-	84	68.398	ENSHGLG00100014906	-	96	66.667	Heterocephalus_glaber_male
ENSFALG00000010003	-	91	62.698	ENSHGLG00100010510	-	100	58.759	Heterocephalus_glaber_male
ENSFALG00000010003	-	100	66.786	ENSHGLG00100014018	-	100	70.952	Heterocephalus_glaber_male
ENSFALG00000010003	-	86	48.606	ENSHCOG00000013425	slbp	90	48.207	Hippocampus_comes
ENSFALG00000010003	-	71	59.296	ENSIPUG00000016780	slbp	74	59.296	Ictalurus_punctatus
ENSFALG00000010003	-	100	68.683	ENSSTOG00000003262	SLBP	100	70.819	Ictidomys_tridecemlineatus
ENSFALG00000010003	-	100	69.039	ENSJJAG00000020549	-	100	69.395	Jaculus_jaculus
ENSFALG00000010003	-	100	66.548	ENSJJAG00000002394	-	100	68.327	Jaculus_jaculus
ENSFALG00000010003	-	90	50.554	ENSKMAG00000008187	slbp	96	50.554	Kryptolebias_marmoratus
ENSFALG00000010003	-	92	50.562	ENSLBEG00000024709	slbp	96	50.562	Labrus_bergylta
ENSFALG00000010003	-	96	56.343	ENSLACG00000014623	SLBP	96	56.343	Latimeria_chalumnae
ENSFALG00000010003	-	97	54.167	ENSLOCG00000011027	slbp	97	54.167	Lepisosteus_oculatus
ENSFALG00000010003	-	78	71.041	ENSLAFG00000012933	SLBP	92	74.554	Loxodonta_africana
ENSFALG00000010003	-	93	70.312	ENSMFAG00000030130	SLBP	97	57.249	Macaca_fascicularis
ENSFALG00000010003	-	96	67.033	ENSMMUG00000032303	SLBP	96	75.229	Macaca_mulatta
ENSFALG00000010003	-	100	50.000	ENSMNEG00000008082	SLBP	100	50.000	Macaca_nemestrina
ENSFALG00000010003	-	79	75.229	ENSMLEG00000024639	SLBP	87	75.229	Mandrillus_leucophaeus
ENSFALG00000010003	-	85	49.206	ENSMAMG00000001046	-	89	49.206	Mastacembelus_armatus
ENSFALG00000010003	-	89	48.669	ENSMZEG00005017261	-	94	48.669	Maylandia_zebra
ENSFALG00000010003	-	78	89.767	ENSMGAG00000013085	SLBP	100	89.767	Meleagris_gallopavo
ENSFALG00000010003	-	100	69.395	ENSMAUG00000009490	Slbp	100	69.751	Mesocricetus_auratus
ENSFALG00000010003	-	100	64.388	ENSMICG00000014244	SLBP	100	66.192	Microcebus_murinus
ENSFALG00000010003	-	100	69.039	ENSMOCG00000015826	Slbp	98	71.163	Microtus_ochrogaster
ENSFALG00000010003	-	70	56.585	ENSMMOG00000010181	slbp	81	56.585	Mola_mola
ENSFALG00000010003	-	93	71.318	ENSMODG00000004304	SLBP	98	72.868	Monodelphis_domestica
ENSFALG00000010003	-	86	50.584	ENSMALG00000013883	-	67	50.584	Monopterus_albus
ENSFALG00000010003	-	100	69.395	MGP_CAROLIEiJ_G0027117	Slbp	100	69.751	Mus_caroli
ENSFALG00000010003	-	100	69.039	ENSMUSG00000004642	Slbp	100	69.395	Mus_musculus
ENSFALG00000010003	-	100	69.039	MGP_PahariEiJ_G0016901	Slbp	100	69.395	Mus_pahari
ENSFALG00000010003	-	100	69.039	MGP_SPRETEiJ_G0028113	Slbp	100	69.395	Mus_spretus
ENSFALG00000010003	-	67	76.757	ENSMPUG00000011139	SLBP	94	76.757	Mustela_putorius_furo
ENSFALG00000010003	-	79	69.585	ENSMLUG00000004425	SLBP	93	72.018	Myotis_lucifugus
ENSFALG00000010003	-	95	68.821	ENSNGAG00000020799	Slbp	93	69.202	Nannospalax_galili
ENSFALG00000010003	-	84	50.000	ENSNBRG00000006044	-	91	50.000	Neolamprologus_brichardi
ENSFALG00000010003	-	100	65.972	ENSNLEG00000000048	SLBP	92	75.229	Nomascus_leucogenys
ENSFALG00000010003	-	64	81.461	ENSMEUG00000002501	SLBP	99	82.022	Notamacropus_eugenii
ENSFALG00000010003	-	100	68.478	ENSODEG00000012641	SLBP	96	71.483	Octodon_degus
ENSFALG00000010003	-	89	49.813	ENSONIG00000017469	-	94	49.813	Oreochromis_niloticus
ENSFALG00000010003	-	80	79.817	ENSOANG00000014243	SLBP	95	80.556	Ornithorhynchus_anatinus
ENSFALG00000010003	-	87	47.177	ENSORLG00000024887	-	91	47.177	Oryzias_latipes
ENSFALG00000010003	-	86	47.951	ENSORLG00020007798	slbp	89	47.951	Oryzias_latipes_hni
ENSFALG00000010003	-	87	47.581	ENSORLG00015016656	slbp	90	47.581	Oryzias_latipes_hsok
ENSFALG00000010003	-	87	48.387	ENSOMEG00000010818	slbp	90	48.387	Oryzias_melastigma
ENSFALG00000010003	-	100	66.192	ENSOGAG00000009750	SLBP	100	66.904	Otolemur_garnettii
ENSFALG00000010003	-	79	76.606	ENSOARG00000016090	SLBP	100	78.440	Ovis_aries
ENSFALG00000010003	-	100	67.616	ENSPPAG00000033300	SLBP	100	67.616	Pan_paniscus
ENSFALG00000010003	-	81	75.556	ENSPPRG00000016897	SLBP	100	73.047	Panthera_pardus
ENSFALG00000010003	-	70	75.130	ENSPTIG00000015057	SLBP	100	77.202	Panthera_tigris_altaica
ENSFALG00000010003	-	100	67.260	ENSPTRG00000015832	SLBP	100	67.260	Pan_troglodytes
ENSFALG00000010003	-	100	64.483	ENSPANG00000004932	SLBP	92	75.229	Papio_anubis
ENSFALG00000010003	-	89	56.031	ENSPKIG00000006183	slbp	88	56.809	Paramormyrops_kingsleyae
ENSFALG00000010003	-	82	51.528	ENSPMGG00000017684	-	96	55.330	Periophthalmus_magnuspinnatus
ENSFALG00000010003	-	100	69.039	ENSPEMG00000018369	Slbp	100	69.395	Peromyscus_maniculatus_bairdii
ENSFALG00000010003	-	100	66.892	ENSPCIG00000013575	SLBP	86	68.243	Phascolarctos_cinereus
ENSFALG00000010003	-	84	50.403	ENSPFOG00000000462	slbp	89	50.403	Poecilia_formosa
ENSFALG00000010003	-	84	50.403	ENSPLAG00000008300	slbp	89	50.403	Poecilia_latipinna
ENSFALG00000010003	-	84	50.403	ENSPMEG00000020807	slbp	89	50.403	Poecilia_mexicana
ENSFALG00000010003	-	84	50.403	ENSPREG00000004561	slbp	89	50.403	Poecilia_reticulata
ENSFALG00000010003	-	100	67.972	ENSPPYG00000014529	SLBP	100	67.972	Pongo_abelii
ENSFALG00000010003	-	100	65.836	ENSPCOG00000017399	SLBP	92	74.312	Propithecus_coquereli
ENSFALG00000010003	-	100	63.701	ENSPVAG00000002807	SLBP	100	64.057	Pteropus_vampyrus
ENSFALG00000010003	-	89	48.669	ENSPNYG00000005451	-	94	48.669	Pundamilia_nyererei
ENSFALG00000010003	-	84	55.102	ENSPNAG00000018503	slbp	89	55.102	Pygocentrus_nattereri
ENSFALG00000010003	-	100	69.039	ENSRNOG00000037162	Slbp	100	69.395	Rattus_norvegicus
ENSFALG00000010003	-	100	66.904	ENSRBIG00000039159	SLBP	92	75.229	Rhinopithecus_bieti
ENSFALG00000010003	-	97	68.773	ENSRROG00000030081	SLBP	95	69.847	Rhinopithecus_roxellana
ENSFALG00000010003	-	70	74.093	ENSSBOG00000033897	SLBP	100	74.093	Saimiri_boliviensis_boliviensis
ENSFALG00000010003	-	100	67.114	ENSSHAG00000013939	SLBP	100	68.456	Sarcophilus_harrisii
ENSFALG00000010003	-	95	51.971	ENSSFOG00015019429	slbp	99	51.971	Scleropages_formosus
ENSFALG00000010003	-	86	48.649	ENSSMAG00000016028	-	90	48.649	Scophthalmus_maximus
ENSFALG00000010003	-	89	49.231	ENSSDUG00000000855	-	95	49.231	Seriola_dumerili
ENSFALG00000010003	-	51	55.556	ENSSLDG00000022893	-	86	55.556	Seriola_lalandi_dorsalis
ENSFALG00000010003	-	80	38.496	ENSSLDG00000007554	-	72	38.496	Seriola_lalandi_dorsalis
ENSFALG00000010003	-	97	67.910	ENSSPUG00000016007	SLBP	98	67.910	Sphenodon_punctatus
ENSFALG00000010003	-	83	52.653	ENSSPAG00000004021	slbp	86	54.505	Stegastes_partitus
ENSFALG00000010003	-	100	67.021	ENSSSCG00000008676	SLBP	100	68.085	Sus_scrofa
ENSFALG00000010003	-	95	90.385	ENSTGUG00000010626	-	100	90.385	Taeniopygia_guttata
ENSFALG00000010003	-	86	51.969	ENSTRUG00000000688	slbp	91	51.969	Takifugu_rubripes
ENSFALG00000010003	-	82	48.536	ENSTNIG00000000484	-	93	48.536	Tetraodon_nigroviridis
ENSFALG00000010003	-	73	74.757	ENSTBEG00000004085	SLBP	75	78.641	Tupaia_belangeri
ENSFALG00000010003	-	64	74.719	ENSTTRG00000004010	-	99	75.281	Tursiops_truncatus
ENSFALG00000010003	-	78	75.576	ENSTTRG00000010901	-	100	76.959	Tursiops_truncatus
ENSFALG00000010003	-	100	66.783	ENSUAMG00000012990	SLBP	100	69.231	Ursus_americanus
ENSFALG00000010003	-	70	75.648	ENSUMAG00000006119	SLBP	100	77.720	Ursus_maritimus
ENSFALG00000010003	-	100	68.327	ENSVVUG00000015578	-	100	69.039	Vulpes_vulpes
ENSFALG00000010003	-	91	55.159	ENSXETG00000003876	slbp	93	57.937	Xenopus_tropicalis
ENSFALG00000010003	-	74	52.582	ENSXCOG00000008275	slbp	78	52.582	Xiphophorus_couchianus
ENSFALG00000010003	-	84	50.403	ENSXMAG00000001331	-	88	50.403	Xiphophorus_maculatus