EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFALG00000010157 (Gene tree)
Gene ID
-
Gene Symbol
CPSF6
Alias
CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7
Full Name
cleavage and polyadenylation specific factor 6
Gene Type
protein_coding
Species
Ficedula_albicollis
Status
putative
Strand
Plus strand
Length
8720 bases
Position
chrJH603173.1:3071103-3079822
Accession
13871
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFALP00000010604RRM_1PF00076.224.6e-0711
ENSFALP00000010606RRM_1PF00076.224.6e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFALT00000010648CPSF6-2021673-ENSFALP00000010606533 (aa)-U3K6F2
ENSFALT00000010646CPSF6-2011783-ENSFALP00000010604530 (aa)-U3K6F0
Gene Model
Click here to download ENSFALG00000010157's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000010157's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFALG00000010157CPSF66255.914ENSFALG00000011927CPSF77257.558
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFALG00000010157CPSF610098.124ENSG00000111605CPSF69798.124Homo_sapiens
ENSFALG00000010157CPSF67651.795ENSG00000149532CPSF79557.471Homo_sapiens
ENSFALG00000010157CPSF610095.880ENSAMEG00000011781CPSF69695.880Ailuropoda_melanoleuca
ENSFALG00000010157CPSF66139.153ENSAOCG00000012357CPSF76842.593Amphiprion_ocellaris
ENSFALG00000010157CPSF66139.153ENSAPEG00000015375CPSF76841.975Amphiprion_percula
ENSFALG00000010157CPSF66052.336ENSANAG00000024635CPSF76753.591Aotus_nancymaae
ENSFALG00000010157CPSF610098.124ENSANAG00000019240CPSF69998.124Aotus_nancymaae
ENSFALG00000010157CPSF66190.419ENSAMXG00000016745CPSF67090.303Astyanax_mexicanus
ENSFALG00000010157CPSF66452.308ENSBTAG00000015263CPSF76858.857Bos_taurus
ENSFALG00000010157CPSF610098.124ENSBTAG00000007323CPSF69798.124Bos_taurus
ENSFALG00000010157CPSF67651.795ENSCJAG00000019282CPSF77957.714Callithrix_jacchus
ENSFALG00000010157CPSF610098.124ENSCJAG00000001798CPSF69798.124Callithrix_jacchus
ENSFALG00000010157CPSF66452.308ENSCAFG00000016152CPSF76859.429Canis_familiaris
ENSFALG00000010157CPSF610098.124ENSCAFG00000000424CPSF610096.248Canis_familiaris
ENSFALG00000010157CPSF610098.124ENSCAFG00020016950CPSF69798.124Canis_lupus_dingo
ENSFALG00000010157CPSF66452.308ENSCAFG00020012753CPSF76859.429Canis_lupus_dingo
ENSFALG00000010157CPSF610098.124ENSCHIG00000010792CPSF69798.124Capra_hircus
ENSFALG00000010157CPSF66452.308ENSCHIG00000014655CPSF76858.857Capra_hircus
ENSFALG00000010157CPSF66452.308ENSTSYG00000010138-6859.429Carlito_syrichta
ENSFALG00000010157CPSF69998.120ENSTSYG00000008591CPSF69698.120Carlito_syrichta
ENSFALG00000010157CPSF66352.308ENSCAPG00000006384CPSF77059.429Cavia_aperea
ENSFALG00000010157CPSF610097.936ENSCPOG00000015201CPSF69797.936Cavia_porcellus
ENSFALG00000010157CPSF66452.308ENSCPOG00000009980CPSF76854.857Cavia_porcellus
ENSFALG00000010157CPSF66451.795ENSCCAG00000032367CPSF76858.857Cebus_capucinus
ENSFALG00000010157CPSF610098.124ENSCCAG00000028149CPSF69798.124Cebus_capucinus
ENSFALG00000010157CPSF67651.795ENSCATG00000042801CPSF77758.857Cercocebus_atys
ENSFALG00000010157CPSF610098.124ENSCATG00000039288CPSF69798.124Cercocebus_atys
ENSFALG00000010157CPSF67248.230ENSCLAG00000003174CPSF76854.286Chinchilla_lanigera
ENSFALG00000010157CPSF610097.749ENSCLAG00000010149CPSF610097.932Chinchilla_lanigera
ENSFALG00000010157CPSF67651.795ENSCSAG00000006414CPSF77758.857Chlorocebus_sabaeus
ENSFALG00000010157CPSF610091.754ENSCSAG00000004232CPSF69791.754Chlorocebus_sabaeus
ENSFALG00000010157CPSF610099.250ENSCPBG00000013322CPSF69799.250Chrysemys_picta_bellii
ENSFALG00000010157CPSF65559.441ENSCSAVG00000000161-5562.687Ciona_savignyi
ENSFALG00000010157CPSF69998.120ENSCANG00000037294CPSF610098.120Colobus_angolensis_palliatus
ENSFALG00000010157CPSF610098.311ENSCGRG00001018082Cpsf69898.308Cricetulus_griseus_chok1gshd
ENSFALG00000010157CPSF66452.821ENSCGRG00001020382Cpsf76860.000Cricetulus_griseus_chok1gshd
ENSFALG00000010157CPSF67951.613ENSCGRG00000017954Cpsf77760.000Cricetulus_griseus_crigri
ENSFALG00000010157CPSF69998.308ENSCGRG00000016909Cpsf610098.308Cricetulus_griseus_crigri
ENSFALG00000010157CPSF65343.299ENSCSEG00000001956CPSF77943.299Cynoglossus_semilaevis
ENSFALG00000010157CPSF67641.818ENSCVAG00000007392CPSF75945.745Cyprinodon_variegatus
ENSFALG00000010157CPSF67649.451ENSDNOG00000018517CPSF77958.286Dasypus_novemcinctus
ENSFALG00000010157CPSF610097.936ENSDNOG00000015292CPSF69797.936Dasypus_novemcinctus
ENSFALG00000010157CPSF69998.308ENSDORG00000002950Cpsf69898.308Dipodomys_ordii
ENSFALG00000010157CPSF66452.041ENSETEG00000003765CPSF76757.310Echinops_telfairi
ENSFALG00000010157CPSF610084.561ENSETEG00000002097CPSF69784.561Echinops_telfairi
ENSFALG00000010157CPSF67863.787ENSEBUG00000003540cpsf65466.667Eptatretus_burgeri
ENSFALG00000010157CPSF610098.124ENSEASG00005008066CPSF69798.124Equus_asinus_asinus
ENSFALG00000010157CPSF66452.308ENSEASG00005008196CPSF76859.429Equus_asinus_asinus
ENSFALG00000010157CPSF610098.124ENSECAG00000015988CPSF69798.124Equus_caballus
ENSFALG00000010157CPSF67649.451ENSECAG00000018521CPSF79158.286Equus_caballus
ENSFALG00000010157CPSF65062.069ENSEEUG00000005966-6661.017Erinaceus_europaeus
ENSFALG00000010157CPSF69991.213ENSEEUG00000015039CPSF610091.213Erinaceus_europaeus
ENSFALG00000010157CPSF67649.451ENSFCAG00000013677CPSF79158.286Felis_catus
ENSFALG00000010157CPSF610097.936ENSFCAG00000002855CPSF69797.936Felis_catus
ENSFALG00000010157CPSF610097.936ENSFDAG00000002281CPSF69697.936Fukomys_damarensis
ENSFALG00000010157CPSF69539.313ENSFDAG00000003919CPSF76854.857Fukomys_damarensis
ENSFALG00000010157CPSF65074.205ENSFHEG00000019693cpsf65170.648Fundulus_heteroclitus
ENSFALG00000010157CPSF65291.736ENSGMOG00000012951cpsf65093.388Gadus_morhua
ENSFALG00000010157CPSF66452.850ENSGALG00000040962CPSF75958.382Gallus_gallus
ENSFALG00000010157CPSF610099.250ENSGAGG00000010228CPSF610098.868Gopherus_agassizii
ENSFALG00000010157CPSF610098.311ENSGGOG00000008211CPSF69798.311Gorilla_gorilla
ENSFALG00000010157CPSF67652.821ENSHGLG00000019090-7354.857Heterocephalus_glaber_female
ENSFALG00000010157CPSF610097.936ENSHGLG00000000792CPSF69797.936Heterocephalus_glaber_female
ENSFALG00000010157CPSF610097.936ENSHGLG00100013861CPSF610097.932Heterocephalus_glaber_male
ENSFALG00000010157CPSF69539.163ENSHGLG00100013933-7854.857Heterocephalus_glaber_male
ENSFALG00000010157CPSF69998.120ENSSTOG00000014133CPSF610098.120Ictidomys_tridecemlineatus
ENSFALG00000010157CPSF66452.308ENSSTOG00000007708CPSF76859.429Ictidomys_tridecemlineatus
ENSFALG00000010157CPSF67652.308ENSJJAG00000019390Cpsf77759.429Jaculus_jaculus
ENSFALG00000010157CPSF610098.124ENSJJAG00000014647Cpsf69998.124Jaculus_jaculus
ENSFALG00000010157CPSF66140.331ENSLBEG00000000947CPSF78039.080Labrus_bergylta
ENSFALG00000010157CPSF66448.361ENSLACG00000005542CPSF76944.872Latimeria_chalumnae
ENSFALG00000010157CPSF66595.294ENSLOCG00000016190cpsf66395.294Lepisosteus_oculatus
ENSFALG00000010157CPSF66452.308ENSLAFG00000032084CPSF76859.429Loxodonta_africana
ENSFALG00000010157CPSF610098.124ENSLAFG00000030413CPSF69798.124Loxodonta_africana
ENSFALG00000010157CPSF66451.795ENSMFAG00000001401CPSF76858.857Macaca_fascicularis
ENSFALG00000010157CPSF610098.124ENSMFAG00000045318CPSF69798.124Macaca_fascicularis
ENSFALG00000010157CPSF67651.795ENSMMUG00000015280CPSF77758.857Macaca_mulatta
ENSFALG00000010157CPSF610098.311ENSMMUG00000002921CPSF69798.311Macaca_mulatta
ENSFALG00000010157CPSF610098.124ENSMNEG00000036311CPSF69798.124Macaca_nemestrina
ENSFALG00000010157CPSF67651.795ENSMNEG00000029585CPSF77758.857Macaca_nemestrina
ENSFALG00000010157CPSF69998.120ENSMLEG00000003957CPSF610098.120Mandrillus_leucophaeus
ENSFALG00000010157CPSF66451.795ENSMLEG00000031269CPSF76858.857Mandrillus_leucophaeus
ENSFALG00000010157CPSF69996.992ENSMGAG00000010552CPSF610096.805Meleagris_gallopavo
ENSFALG00000010157CPSF610098.124ENSMAUG00000013240Cpsf69798.124Mesocricetus_auratus
ENSFALG00000010157CPSF66452.308ENSMAUG00000013020Cpsf76859.429Mesocricetus_auratus
ENSFALG00000010157CPSF66452.308ENSMICG00000013788CPSF76859.429Microcebus_murinus
ENSFALG00000010157CPSF610098.311ENSMICG00000007385-9798.311Microcebus_murinus
ENSFALG00000010157CPSF66452.308ENSMOCG00000000072Cpsf76859.429Microtus_ochrogaster
ENSFALG00000010157CPSF610098.311ENSMOCG00000013982Cpsf69798.311Microtus_ochrogaster
ENSFALG00000010157CPSF66452.792ENSMODG00000020364CPSF76957.386Monodelphis_domestica
ENSFALG00000010157CPSF610098.311ENSMODG00000007123CPSF69798.311Monodelphis_domestica
ENSFALG00000010157CPSF67389.175ENSMALG00000014908cpsf67489.326Monopterus_albus
ENSFALG00000010157CPSF610098.311MGP_CAROLIEiJ_G0015834Cpsf69798.311Mus_caroli
ENSFALG00000010157CPSF66452.308MGP_CAROLIEiJ_G0022690Cpsf76859.429Mus_caroli
ENSFALG00000010157CPSF66452.308ENSMUSG00000034820Cpsf76859.429Mus_musculus
ENSFALG00000010157CPSF610097.936ENSMUSG00000055531Cpsf69797.936Mus_musculus
ENSFALG00000010157CPSF68197.736MGP_PahariEiJ_G0031253Cpsf68397.872Mus_pahari
ENSFALG00000010157CPSF66452.308MGP_PahariEiJ_G0014184Cpsf76859.429Mus_pahari
ENSFALG00000010157CPSF610097.936MGP_SPRETEiJ_G0016657Cpsf69797.936Mus_spretus
ENSFALG00000010157CPSF66452.308MGP_SPRETEiJ_G0023604Cpsf76859.429Mus_spretus
ENSFALG00000010157CPSF66351.282ENSMPUG00000014163CPSF76658.286Mustela_putorius_furo
ENSFALG00000010157CPSF610096.248ENSMPUG00000017502CPSF69796.248Mustela_putorius_furo
ENSFALG00000010157CPSF66791.204ENSMLUG00000028728-8892.893Myotis_lucifugus
ENSFALG00000010157CPSF610096.248ENSMLUG00000004172-9796.248Myotis_lucifugus
ENSFALG00000010157CPSF67652.308ENSMLUG00000013278CPSF77759.429Myotis_lucifugus
ENSFALG00000010157CPSF610098.311ENSNGAG00000015901Cpsf69798.311Nannospalax_galili
ENSFALG00000010157CPSF66452.308ENSNGAG00000005031Cpsf76859.429Nannospalax_galili
ENSFALG00000010157CPSF610098.124ENSNLEG00000003798CPSF69798.124Nomascus_leucogenys
ENSFALG00000010157CPSF66451.795ENSNLEG00000002529CPSF76258.857Nomascus_leucogenys
ENSFALG00000010157CPSF66453.807ENSMEUG00000002261CPSF76859.302Notamacropus_eugenii
ENSFALG00000010157CPSF69991.564ENSOPRG00000005199CPSF610091.564Ochotona_princeps
ENSFALG00000010157CPSF610096.248ENSODEG00000018399-9796.248Octodon_degus
ENSFALG00000010157CPSF66450.000ENSODEG00000002610CPSF76854.494Octodon_degus
ENSFALG00000010157CPSF67396.954ENSODEG00000004418-7997.740Octodon_degus
ENSFALG00000010157CPSF67885.859ENSODEG00000007109-5883.178Octodon_degus
ENSFALG00000010157CPSF69481.474ENSOANG00000005944CPSF65087.170Ornithorhynchus_anatinus
ENSFALG00000010157CPSF610091.754ENSOCUG00000013505CPSF69791.754Oryctolagus_cuniculus
ENSFALG00000010157CPSF69939.892ENSOCUG00000024726CPSF76858.857Oryctolagus_cuniculus
ENSFALG00000010157CPSF69482.446ENSORLG00000013893cpsf69177.950Oryzias_latipes
ENSFALG00000010157CPSF67142.391ENSORLG00000006495CPSF75549.558Oryzias_latipes
ENSFALG00000010157CPSF67043.333ENSORLG00020012657CPSF75549.558Oryzias_latipes_hni
ENSFALG00000010157CPSF69482.446ENSORLG00020016593cpsf69177.950Oryzias_latipes_hni
ENSFALG00000010157CPSF69482.446ENSORLG00015015558cpsf69177.950Oryzias_latipes_hsok
ENSFALG00000010157CPSF67338.028ENSOMEG00000000539CPSF76037.037Oryzias_melastigma
ENSFALG00000010157CPSF66452.308ENSOGAG00000027958CPSF76359.429Otolemur_garnettii
ENSFALG00000010157CPSF610096.060ENSOGAG00000031988CPSF610096.060Otolemur_garnettii
ENSFALG00000010157CPSF66452.308ENSOARG00000012937CPSF76158.857Ovis_aries
ENSFALG00000010157CPSF610091.930ENSOARG00000020532CPSF610091.248Ovis_aries
ENSFALG00000010157CPSF66451.795ENSPPAG00000028232CPSF77058.857Pan_paniscus
ENSFALG00000010157CPSF66452.308ENSPPRG00000008538CPSF76859.429Panthera_pardus
ENSFALG00000010157CPSF610097.936ENSPPRG00000021620CPSF69797.936Panthera_pardus
ENSFALG00000010157CPSF69497.800ENSPTIG00000004079CPSF610097.800Panthera_tigris_altaica
ENSFALG00000010157CPSF66452.308ENSPTIG00000021699CPSF76859.429Panthera_tigris_altaica
ENSFALG00000010157CPSF610098.311ENSPTRG00000005205CPSF69798.311Pan_troglodytes
ENSFALG00000010157CPSF66451.795ENSPTRG00000003742CPSF77058.857Pan_troglodytes
ENSFALG00000010157CPSF610098.124ENSPANG00000011641CPSF69798.124Papio_anubis
ENSFALG00000010157CPSF66451.795ENSPANG00000006037CPSF76858.857Papio_anubis
ENSFALG00000010157CPSF65948.588ENSPKIG00000018054CPSF77545.213Paramormyrops_kingsleyae
ENSFALG00000010157CPSF69481.349ENSPKIG00000003081-9181.113Paramormyrops_kingsleyae
ENSFALG00000010157CPSF67652.308ENSPEMG00000012648Cpsf77759.429Peromyscus_maniculatus_bairdii
ENSFALG00000010157CPSF69998.120ENSPEMG00000007973Cpsf610098.120Peromyscus_maniculatus_bairdii
ENSFALG00000010157CPSF66452.792ENSPCIG00000002551CPSF78056.284Phascolarctos_cinereus
ENSFALG00000010157CPSF610098.311ENSPCIG00000019063CPSF69798.311Phascolarctos_cinereus
ENSFALG00000010157CPSF610097.936ENSPPYG00000004756CPSF69797.936Pongo_abelii
ENSFALG00000010157CPSF66451.795ENSPPYG00000003188CPSF76858.857Pongo_abelii
ENSFALG00000010157CPSF610091.754ENSPCAG00000011574CPSF69791.754Procavia_capensis
ENSFALG00000010157CPSF66452.308ENSPCOG00000011976CPSF76859.429Propithecus_coquereli
ENSFALG00000010157CPSF610098.124ENSPCOG00000024384CPSF69798.124Propithecus_coquereli
ENSFALG00000010157CPSF66452.308ENSPVAG00000010675CPSF76859.429Pteropus_vampyrus
ENSFALG00000010157CPSF65647.799ENSPNAG00000015073CPSF76847.879Pygocentrus_nattereri
ENSFALG00000010157CPSF67651.795ENSRNOG00000020668Cpsf77759.302Rattus_norvegicus
ENSFALG00000010157CPSF610097.936ENSRNOG00000005927Cpsf69797.936Rattus_norvegicus
ENSFALG00000010157CPSF610098.124ENSRBIG00000042827CPSF69798.124Rhinopithecus_bieti
ENSFALG00000010157CPSF67651.795ENSRBIG00000031429CPSF79157.714Rhinopithecus_bieti
ENSFALG00000010157CPSF66451.795ENSRROG00000045009CPSF76858.857Rhinopithecus_roxellana
ENSFALG00000010157CPSF610097.936ENSRROG00000042758CPSF69797.936Rhinopithecus_roxellana
ENSFALG00000010157CPSF69498.000ENSSBOG00000010652CPSF610098.000Saimiri_boliviensis_boliviensis
ENSFALG00000010157CPSF66451.795ENSSBOG00000018431CPSF76858.857Saimiri_boliviensis_boliviensis
ENSFALG00000010157CPSF66451.269ENSSHAG00000011964CPSF76859.302Sarcophilus_harrisii
ENSFALG00000010157CPSF69494.466ENSSHAG00000006635CPSF68888.095Sarcophilus_harrisii
ENSFALG00000010157CPSF67142.130ENSSFOG00015010288cpsf77340.659Scleropages_formosus
ENSFALG00000010157CPSF69478.416ENSSFOG00015001688CPSF67980.556Scleropages_formosus
ENSFALG00000010157CPSF69482.772ENSSFOG00015015803CPSF69180.556Scleropages_formosus
ENSFALG00000010157CPSF69397.552ENSSARG00000006743CPSF68497.552Sorex_araneus
ENSFALG00000010157CPSF69552.604ENSSPUG00000019344CPSF76955.233Sphenodon_punctatus
ENSFALG00000010157CPSF610098.868ENSSPUG00000001238CPSF69793.972Sphenodon_punctatus
ENSFALG00000010157CPSF65474.035ENSSPAG00000013906cpsf69181.188Stegastes_partitus
ENSFALG00000010157CPSF67649.451ENSSSCG00000013083CPSF77958.286Sus_scrofa
ENSFALG00000010157CPSF610098.124ENSSSCG00000038031CPSF69798.124Sus_scrofa
ENSFALG00000010157CPSF66153.889ENSTGUG00000006513CPSF76855.172Taeniopygia_guttata
ENSFALG00000010157CPSF66351.795ENSTTRG00000011085CPSF77059.429Tursiops_truncatus
ENSFALG00000010157CPSF66452.308ENSUAMG00000017809CPSF76859.429Ursus_americanus
ENSFALG00000010157CPSF69498.000ENSUAMG00000023492CPSF610098.000Ursus_americanus
ENSFALG00000010157CPSF67652.308ENSUMAG00000011825CPSF77759.429Ursus_maritimus
ENSFALG00000010157CPSF69498.000ENSUMAG00000020779CPSF610098.000Ursus_maritimus
ENSFALG00000010157CPSF69991.740ENSVPAG00000008469CPSF610091.740Vicugna_pacos
ENSFALG00000010157CPSF69491.248ENSVVUG00000010156-10091.248Vulpes_vulpes
ENSFALG00000010157CPSF67649.451ENSVVUG00000004939CPSF77958.286Vulpes_vulpes
ENSFALG00000010157CPSF69640.417ENSXETG00000006715cpsf75347.748Xenopus_tropicalis

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