EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000010299 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 14657 bases
Position: chrJH603206.1:5839652-5854308
Accession: 101816222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000010742	MRP-S27	PF10037.9	7.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000010785	PTCD2-201	3083	XM_005060873	ENSFALP00000010742	328 (aa)	XP_005060930	U3K6T8

Gene Model

Click here to download ENSFALG00000010299's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000010299's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000010299	PTCD2	99	51.376	ENSG00000049883	PTCD2	100	45.813	Homo_sapiens
ENSFALG00000010299	PTCD2	99	45.260	ENSAPOG00000020682	ptcd2	86	45.260	Acanthochromis_polyacanthus
ENSFALG00000010299	PTCD2	99	50.765	ENSAMEG00000007194	PTCD2	84	50.765	Ailuropoda_melanoleuca
ENSFALG00000010299	PTCD2	96	43.438	ENSACIG00000002053	ptcd2	95	43.438	Amphilophus_citrinellus
ENSFALG00000010299	PTCD2	99	44.954	ENSAOCG00000006616	ptcd2	84	44.954	Amphiprion_ocellaris
ENSFALG00000010299	PTCD2	99	44.954	ENSAPEG00000022926	ptcd2	84	44.954	Amphiprion_percula
ENSFALG00000010299	PTCD2	99	58.104	ENSACAG00000009747	PTCD2	84	58.104	Anolis_carolinensis
ENSFALG00000010299	PTCD2	99	51.682	ENSANAG00000029353	PTCD2	84	51.682	Aotus_nancymaae
ENSFALG00000010299	PTCD2	99	44.648	ENSACLG00000027742	ptcd2	84	44.648	Astatotilapia_calliptera
ENSFALG00000010299	PTCD2	91	42.667	ENSAMXG00000029404	ptcd2	80	42.667	Astyanax_mexicanus
ENSFALG00000010299	PTCD2	99	51.376	ENSBTAG00000014675	PTCD2	85	51.376	Bos_taurus
ENSFALG00000010299	PTCD2	99	52.294	ENSCJAG00000016364	PTCD2	84	52.294	Callithrix_jacchus
ENSFALG00000010299	PTCD2	99	53.211	ENSCAFG00000007982	PTCD2	77	53.211	Canis_familiaris
ENSFALG00000010299	PTCD2	99	53.211	ENSCAFG00020019147	PTCD2	92	53.211	Canis_lupus_dingo
ENSFALG00000010299	PTCD2	99	51.376	ENSCHIG00000017118	PTCD2	85	51.376	Capra_hircus
ENSFALG00000010299	PTCD2	99	50.459	ENSCPOG00000040168	PTCD2	85	50.459	Cavia_porcellus
ENSFALG00000010299	PTCD2	99	51.682	ENSCCAG00000029389	-	84	51.682	Cebus_capucinus
ENSFALG00000010299	PTCD2	80	54.167	ENSCCAG00000021996	-	81	54.167	Cebus_capucinus
ENSFALG00000010299	PTCD2	99	52.599	ENSCATG00000019069	PTCD2	85	52.599	Cercocebus_atys
ENSFALG00000010299	PTCD2	99	51.682	ENSCLAG00000000072	PTCD2	85	51.682	Chinchilla_lanigera
ENSFALG00000010299	PTCD2	99	52.599	ENSCSAG00000015623	PTCD2	85	52.599	Chlorocebus_sabaeus
ENSFALG00000010299	PTCD2	71	64.844	ENSCHOG00000010634	PTCD2	67	64.844	Choloepus_hoffmanni
ENSFALG00000010299	PTCD2	99	57.187	ENSCPBG00000000216	PTCD2	84	57.187	Chrysemys_picta_bellii
ENSFALG00000010299	PTCD2	99	53.211	ENSCANG00000035636	PTCD2	84	53.211	Colobus_angolensis_palliatus
ENSFALG00000010299	PTCD2	99	52.294	ENSCGRG00001015289	Ptcd2	72	52.294	Cricetulus_griseus_chok1gshd
ENSFALG00000010299	PTCD2	99	52.294	ENSCGRG00000006193	Ptcd2	72	52.294	Cricetulus_griseus_crigri
ENSFALG00000010299	PTCD2	99	44.648	ENSCVAG00000001285	ptcd2	84	44.648	Cyprinodon_variegatus
ENSFALG00000010299	PTCD2	99	45.846	ENSDARG00000035391	ptcd2	85	45.846	Danio_rerio
ENSFALG00000010299	PTCD2	100	53.659	ENSDNOG00000008719	PTCD2	86	53.659	Dasypus_novemcinctus
ENSFALG00000010299	PTCD2	99	50.459	ENSDORG00000004921	Ptcd2	84	50.459	Dipodomys_ordii
ENSFALG00000010299	PTCD2	99	46.341	ENSETEG00000016542	PTCD2	84	46.341	Echinops_telfairi
ENSFALG00000010299	PTCD2	99	50.765	ENSEASG00005018038	PTCD2	86	50.765	Equus_asinus_asinus
ENSFALG00000010299	PTCD2	99	50.765	ENSECAG00000007022	PTCD2	84	50.765	Equus_caballus
ENSFALG00000010299	PTCD2	99	51.988	ENSEEUG00000014031	PTCD2	84	51.988	Erinaceus_europaeus
ENSFALG00000010299	PTCD2	99	45.122	ENSELUG00000003584	ptcd2	85	45.122	Esox_lucius
ENSFALG00000010299	PTCD2	95	54.633	ENSFCAG00000045432	PTCD2	73	54.633	Felis_catus
ENSFALG00000010299	PTCD2	99	50.153	ENSFDAG00000018461	PTCD2	85	50.153	Fukomys_damarensis
ENSFALG00000010299	PTCD2	99	42.727	ENSGMOG00000003637	ptcd2	85	42.727	Gadus_morhua
ENSFALG00000010299	PTCD2	99	80.428	ENSGALG00000038260	PTCD2	86	80.428	Gallus_gallus
ENSFALG00000010299	PTCD2	99	64.220	ENSGAGG00000021952	PTCD2	84	64.220	Gopherus_agassizii
ENSFALG00000010299	PTCD2	99	51.376	ENSGGOG00000010695	PTCD2	84	51.376	Gorilla_gorilla
ENSFALG00000010299	PTCD2	99	44.648	ENSHBUG00000009191	ptcd2	84	44.648	Haplochromis_burtoni
ENSFALG00000010299	PTCD2	99	50.765	ENSHGLG00000001234	PTCD2	85	50.765	Heterocephalus_glaber_female
ENSFALG00000010299	PTCD2	99	50.765	ENSHGLG00100015419	PTCD2	85	50.765	Heterocephalus_glaber_male
ENSFALG00000010299	PTCD2	99	43.598	ENSHCOG00000001703	ptcd2	85	43.598	Hippocampus_comes
ENSFALG00000010299	PTCD2	94	43.831	ENSIPUG00000006080	ptcd2	79	43.831	Ictalurus_punctatus
ENSFALG00000010299	PTCD2	99	51.524	ENSSTOG00000006596	PTCD2	86	51.524	Ictidomys_tridecemlineatus
ENSFALG00000010299	PTCD2	99	52.294	ENSJJAG00000024388	Ptcd2	85	52.294	Jaculus_jaculus
ENSFALG00000010299	PTCD2	97	37.304	ENSKMAG00000009329	ptcd2	83	37.304	Kryptolebias_marmoratus
ENSFALG00000010299	PTCD2	99	44.037	ENSLBEG00000024871	ptcd2	84	44.037	Labrus_bergylta
ENSFALG00000010299	PTCD2	99	51.829	ENSLOCG00000011122	ptcd2	85	51.829	Lepisosteus_oculatus
ENSFALG00000010299	PTCD2	78	55.686	ENSLAFG00000004115	PTCD2	82	55.686	Loxodonta_africana
ENSFALG00000010299	PTCD2	99	53.211	ENSMFAG00000031516	PTCD2	84	53.211	Macaca_fascicularis
ENSFALG00000010299	PTCD2	99	52.905	ENSMNEG00000007537	PTCD2	85	52.905	Macaca_nemestrina
ENSFALG00000010299	PTCD2	99	52.599	ENSMLEG00000031093	PTCD2	84	52.599	Mandrillus_leucophaeus
ENSFALG00000010299	PTCD2	99	44.954	ENSMAMG00000018529	ptcd2	86	44.954	Mastacembelus_armatus
ENSFALG00000010299	PTCD2	99	44.648	ENSMZEG00005003625	ptcd2	84	44.648	Maylandia_zebra
ENSFALG00000010299	PTCD2	99	80.734	ENSMGAG00000005033	PTCD2	94	80.734	Meleagris_gallopavo
ENSFALG00000010299	PTCD2	99	39.144	ENSMAUG00000020253	Ptcd2	83	39.144	Mesocricetus_auratus
ENSFALG00000010299	PTCD2	99	52.599	ENSMICG00000004535	PTCD2	84	52.599	Microcebus_murinus
ENSFALG00000010299	PTCD2	99	51.682	ENSMOCG00000019985	Ptcd2	86	51.682	Microtus_ochrogaster
ENSFALG00000010299	PTCD2	99	50.459	ENSMODG00000001695	PTCD2	85	50.459	Monodelphis_domestica
ENSFALG00000010299	PTCD2	99	42.508	ENSMALG00000022372	ptcd2	86	42.508	Monopterus_albus
ENSFALG00000010299	PTCD2	99	49.847	MGP_CAROLIEiJ_G0018829	Ptcd2	86	49.847	Mus_caroli
ENSFALG00000010299	PTCD2	99	48.930	ENSMUSG00000021650	Ptcd2	86	48.930	Mus_musculus
ENSFALG00000010299	PTCD2	99	49.235	MGP_PahariEiJ_G0015904	Ptcd2	86	49.235	Mus_pahari
ENSFALG00000010299	PTCD2	99	50.153	MGP_SPRETEiJ_G0019711	Ptcd2	86	50.153	Mus_spretus
ENSFALG00000010299	PTCD2	99	52.905	ENSMPUG00000014401	PTCD2	85	52.905	Mustela_putorius_furo
ENSFALG00000010299	PTCD2	99	49.847	ENSMLUG00000007374	PTCD2	84	49.847	Myotis_lucifugus
ENSFALG00000010299	PTCD2	99	48.012	ENSNGAG00000005027	Ptcd2	85	48.012	Nannospalax_galili
ENSFALG00000010299	PTCD2	99	44.954	ENSNBRG00000008174	ptcd2	86	44.954	Neolamprologus_brichardi
ENSFALG00000010299	PTCD2	99	44.037	ENSNBRG00000000092	-	99	44.037	Neolamprologus_brichardi
ENSFALG00000010299	PTCD2	99	52.905	ENSNLEG00000004516	PTCD2	84	52.905	Nomascus_leucogenys
ENSFALG00000010299	PTCD2	76	63.068	ENSMEUG00000014012	-	65	63.068	Notamacropus_eugenii
ENSFALG00000010299	PTCD2	99	51.070	ENSOPRG00000007290	PTCD2	84	51.070	Ochotona_princeps
ENSFALG00000010299	PTCD2	99	51.070	ENSODEG00000016417	PTCD2	85	51.070	Octodon_degus
ENSFALG00000010299	PTCD2	81	47.566	ENSONIG00000011269	ptcd2	78	47.566	Oreochromis_niloticus
ENSFALG00000010299	PTCD2	99	50.765	ENSOCUG00000007970	PTCD2	85	50.765	Oryctolagus_cuniculus
ENSFALG00000010299	PTCD2	99	42.202	ENSORLG00000003851	ptcd2	84	42.202	Oryzias_latipes
ENSFALG00000010299	PTCD2	99	41.284	ENSORLG00020009823	ptcd2	85	41.284	Oryzias_latipes_hni
ENSFALG00000010299	PTCD2	94	44.481	ENSORLG00015016777	ptcd2	89	44.481	Oryzias_latipes_hsok
ENSFALG00000010299	PTCD2	99	42.508	ENSOMEG00000012396	ptcd2	79	42.508	Oryzias_melastigma
ENSFALG00000010299	PTCD2	99	50.765	ENSOGAG00000008390	PTCD2	84	50.765	Otolemur_garnettii
ENSFALG00000010299	PTCD2	99	51.376	ENSOARG00000005087	PTCD2	84	51.376	Ovis_aries
ENSFALG00000010299	PTCD2	99	51.376	ENSPPAG00000028480	PTCD2	84	51.376	Pan_paniscus
ENSFALG00000010299	PTCD2	99	51.070	ENSPTRG00000016968	PTCD2	84	51.070	Pan_troglodytes
ENSFALG00000010299	PTCD2	99	52.905	ENSPANG00000006611	PTCD2	84	52.905	Papio_anubis
ENSFALG00000010299	PTCD2	98	45.872	ENSPKIG00000019896	ptcd2	85	45.872	Paramormyrops_kingsleyae
ENSFALG00000010299	PTCD2	86	63.958	ENSPSIG00000014559	PTCD2	88	63.958	Pelodiscus_sinensis
ENSFALG00000010299	PTCD2	99	54.103	ENSPEMG00000000884	Ptcd2	86	54.103	Peromyscus_maniculatus_bairdii
ENSFALG00000010299	PTCD2	100	50.305	ENSPCIG00000029047	PTCD2	85	50.305	Phascolarctos_cinereus
ENSFALG00000010299	PTCD2	92	44.518	ENSPLAG00000010456	ptcd2	85	42.813	Poecilia_latipinna
ENSFALG00000010299	PTCD2	92	43.522	ENSPREG00000021797	ptcd2	77	43.522	Poecilia_reticulata
ENSFALG00000010299	PTCD2	83	51.103	ENSPPYG00000015543	PTCD2	79	51.103	Pongo_abelii
ENSFALG00000010299	PTCD2	60	56.853	ENSPCAG00000006806	PTCD2	63	56.853	Procavia_capensis
ENSFALG00000010299	PTCD2	99	49.541	ENSPVAG00000010935	PTCD2	84	49.541	Pteropus_vampyrus
ENSFALG00000010299	PTCD2	99	44.648	ENSPNYG00000003122	ptcd2	84	44.648	Pundamilia_nyererei
ENSFALG00000010299	PTCD2	99	44.848	ENSPNAG00000021490	ptcd2	86	44.848	Pygocentrus_nattereri
ENSFALG00000010299	PTCD2	99	50.153	ENSRNOG00000028403	Ptcd2	86	50.153	Rattus_norvegicus
ENSFALG00000010299	PTCD2	99	48.624	ENSRBIG00000032929	PTCD2	83	48.624	Rhinopithecus_bieti
ENSFALG00000010299	PTCD2	99	53.517	ENSRROG00000000080	PTCD2	85	53.517	Rhinopithecus_roxellana
ENSFALG00000010299	PTCD2	99	50.765	ENSSBOG00000018911	PTCD2	85	50.765	Saimiri_boliviensis_boliviensis
ENSFALG00000010299	PTCD2	99	50.153	ENSSHAG00000003833	PTCD2	84	50.153	Sarcophilus_harrisii
ENSFALG00000010299	PTCD2	97	47.962	ENSSFOG00015015415	ptcd2	83	47.962	Scleropages_formosus
ENSFALG00000010299	PTCD2	99	41.284	ENSSMAG00000010350	ptcd2	85	41.284	Scophthalmus_maximus
ENSFALG00000010299	PTCD2	99	45.566	ENSSDUG00000008142	ptcd2	82	45.566	Seriola_dumerili
ENSFALG00000010299	PTCD2	99	45.872	ENSSLDG00000015284	ptcd2	86	45.872	Seriola_lalandi_dorsalis
ENSFALG00000010299	PTCD2	77	47.431	ENSSARG00000004983	PTCD2	81	47.431	Sorex_araneus
ENSFALG00000010299	PTCD2	99	52.905	ENSSPUG00000000176	PTCD2	82	52.905	Sphenodon_punctatus
ENSFALG00000010299	PTCD2	99	43.692	ENSSPAG00000008591	ptcd2	84	43.692	Stegastes_partitus
ENSFALG00000010299	PTCD2	99	49.541	ENSSSCG00000016975	PTCD2	80	49.524	Sus_scrofa
ENSFALG00000010299	PTCD2	99	91.131	ENSTGUG00000005705	PTCD2	95	91.131	Taeniopygia_guttata
ENSFALG00000010299	PTCD2	99	49.541	ENSTBEG00000016559	PTCD2	84	49.541	Tupaia_belangeri
ENSFALG00000010299	PTCD2	99	51.682	ENSTTRG00000011851	PTCD2	84	51.682	Tursiops_truncatus
ENSFALG00000010299	PTCD2	99	50.765	ENSUAMG00000007583	PTCD2	77	50.765	Ursus_americanus
ENSFALG00000010299	PTCD2	99	50.765	ENSUMAG00000007666	PTCD2	85	50.765	Ursus_maritimus
ENSFALG00000010299	PTCD2	99	48.930	ENSVPAG00000009597	PTCD2	84	48.930	Vicugna_pacos
ENSFALG00000010299	PTCD2	99	52.905	ENSVVUG00000007299	-	85	52.905	Vulpes_vulpes
ENSFALG00000010299	PTCD2	98	48.758	ENSXETG00000031652	PTCD2	84	48.758	Xenopus_tropicalis
ENSFALG00000010299	PTCD2	92	45.183	ENSXMAG00000005940	ptcd2	77	43.119	Xiphophorus_maculatus