EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000010618 (Gene tree)
Gene ID: -
Gene Symbol: LSM14B
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 7617 bases
Position: chrJH603232.1:2097654-2105270
Accession: 15887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000011087	FDF	PF09532.10	1.3e-24	1	1
ENSFALP00000011087	LSM14	PF12701.7	6.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000011132	LSM14B-201	2737	-	ENSFALP00000011087	387 (aa)	-	U3K7T3

Gene Model

Click here to download ENSFALG00000010618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000010618's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000010618	LSM14B	90	46.923	ENSFALG00000007771	LSM14A	79	48.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000010618	LSM14B	100	76.486	ENSG00000149657	LSM14B	100	80.876	Homo_sapiens
ENSFALG00000010618	LSM14B	90	46.260	ENSAPOG00000001780	lsm14b	81	47.814	Acanthochromis_polyacanthus
ENSFALG00000010618	LSM14B	99	86.753	ENSAMEG00000013430	LSM14B	90	86.753	Ailuropoda_melanoleuca
ENSFALG00000010618	LSM14B	90	43.944	ENSACIG00000012266	lsm14b	81	43.514	Amphilophus_citrinellus
ENSFALG00000010618	LSM14B	90	47.091	ENSAOCG00000012380	lsm14b	81	48.087	Amphiprion_ocellaris
ENSFALG00000010618	LSM14B	100	43.000	ENSAOCG00000006667	LSM14B	82	42.623	Amphiprion_ocellaris
ENSFALG00000010618	LSM14B	90	42.618	ENSAPEG00000023633	lsm14b	80	43.089	Amphiprion_percula
ENSFALG00000010618	LSM14B	90	45.915	ENSATEG00000016603	lsm14b	81	46.111	Anabas_testudineus
ENSFALG00000010618	LSM14B	78	41.447	ENSATEG00000015895	LSM14B	83	39.649	Anabas_testudineus
ENSFALG00000010618	LSM14B	100	95.090	ENSAPLG00000013203	LSM14B	98	95.090	Anas_platyrhynchos
ENSFALG00000010618	LSM14B	100	76.804	ENSACAG00000016195	LSM14B	90	76.804	Anolis_carolinensis
ENSFALG00000010618	LSM14B	100	85.013	ENSANAG00000037915	LSM14B	91	85.013	Aotus_nancymaae
ENSFALG00000010618	LSM14B	90	41.555	ENSACLG00000019663	lsm14b	81	44.565	Astatotilapia_calliptera
ENSFALG00000010618	LSM14B	90	52.877	ENSAMXG00000002865	lsm14b	82	52.973	Astyanax_mexicanus
ENSFALG00000010618	LSM14B	100	86.047	ENSBTAG00000021558	LSM14B	91	86.047	Bos_taurus
ENSFALG00000010618	LSM14B	100	85.788	ENSCJAG00000014434	LSM14B	91	85.788	Callithrix_jacchus
ENSFALG00000010618	LSM14B	99	85.974	ENSCAFG00000012518	LSM14B	98	85.974	Canis_familiaris
ENSFALG00000010618	LSM14B	100	85.788	ENSCAFG00020022150	LSM14B	91	85.788	Canis_lupus_dingo
ENSFALG00000010618	LSM14B	100	57.623	ENSCHIG00000022681	-	90	57.881	Capra_hircus
ENSFALG00000010618	LSM14B	100	86.822	ENSCHIG00000010284	-	91	86.822	Capra_hircus
ENSFALG00000010618	LSM14B	99	77.344	ENSTSYG00000031914	LSM14B	89	77.344	Carlito_syrichta
ENSFALG00000010618	LSM14B	99	76.623	ENSCAPG00000013059	LSM14B	100	83.117	Cavia_aperea
ENSFALG00000010618	LSM14B	99	76.823	ENSCPOG00000038080	LSM14B	100	83.442	Cavia_porcellus
ENSFALG00000010618	LSM14B	93	64.804	ENSCCAG00000024900	-	99	68.489	Cebus_capucinus
ENSFALG00000010618	LSM14B	100	75.969	ENSCCAG00000021267	LSM14B	90	75.969	Cebus_capucinus
ENSFALG00000010618	LSM14B	100	85.013	ENSCATG00000036006	LSM14B	91	85.013	Cercocebus_atys
ENSFALG00000010618	LSM14B	99	76.302	ENSCLAG00000003186	LSM14B	100	82.792	Chinchilla_lanigera
ENSFALG00000010618	LSM14B	100	85.271	ENSCSAG00000015729	LSM14B	91	85.271	Chlorocebus_sabaeus
ENSFALG00000010618	LSM14B	79	62.418	ENSCHOG00000006997	-	100	61.290	Choloepus_hoffmanni
ENSFALG00000010618	LSM14B	100	91.473	ENSCPBG00000027065	LSM14B	91	91.473	Chrysemys_picta_bellii
ENSFALG00000010618	LSM14B	99	76.302	ENSCANG00000036986	LSM14B	100	76.302	Colobus_angolensis_palliatus
ENSFALG00000010618	LSM14B	100	77.003	ENSCGRG00001018399	Lsm14b	100	83.766	Cricetulus_griseus_chok1gshd
ENSFALG00000010618	LSM14B	78	83.389	ENSCGRG00000006111	-	100	83.389	Cricetulus_griseus_crigri
ENSFALG00000010618	LSM14B	64	73.171	ENSCGRG00000002484	-	100	70.732	Cricetulus_griseus_crigri
ENSFALG00000010618	LSM14B	91	43.802	ENSCSEG00000004722	lsm14b	82	44.414	Cynoglossus_semilaevis
ENSFALG00000010618	LSM14B	99	41.542	ENSCSEG00000020669	LSM14B	82	40.160	Cynoglossus_semilaevis
ENSFALG00000010618	LSM14B	76	33.557	ENSCVAG00000012433	-	88	31.673	Cyprinodon_variegatus
ENSFALG00000010618	LSM14B	100	46.867	ENSDARG00000025386	lsm14b	90	46.582	Danio_rerio
ENSFALG00000010618	LSM14B	80	83.442	ENSDNOG00000025246	LSM14B	100	83.442	Dasypus_novemcinctus
ENSFALG00000010618	LSM14B	100	75.969	ENSDORG00000016683	Lsm14b	100	82.792	Dipodomys_ordii
ENSFALG00000010618	LSM14B	99	62.240	ENSETEG00000001869	-	89	60.938	Echinops_telfairi
ENSFALG00000010618	LSM14B	68	66.920	ENSETEG00000011188	-	96	66.920	Echinops_telfairi
ENSFALG00000010618	LSM14B	80	83.117	ENSEASG00005023218	LSM14B	100	83.117	Equus_asinus_asinus
ENSFALG00000010618	LSM14B	100	85.788	ENSECAG00000010659	LSM14B	91	85.788	Equus_caballus
ENSFALG00000010618	LSM14B	59	95.960	ENSEEUG00000007331	LSM14B	80	95.960	Erinaceus_europaeus
ENSFALG00000010618	LSM14B	90	46.389	ENSELUG00000016299	LSM14B	89	47.607	Esox_lucius
ENSFALG00000010618	LSM14B	99	50.255	ENSELUG00000005780	lsm14b	82	52.632	Esox_lucius
ENSFALG00000010618	LSM14B	100	77.003	ENSFCAG00000003248	LSM14B	90	77.003	Felis_catus
ENSFALG00000010618	LSM14B	99	75.781	ENSFDAG00000002214	LSM14B	100	82.143	Fukomys_damarensis
ENSFALG00000010618	LSM14B	77	38.535	ENSFHEG00000003362	LSM14B	72	37.425	Fundulus_heteroclitus
ENSFALG00000010618	LSM14B	92	42.507	ENSFHEG00000006237	lsm14b	81	43.324	Fundulus_heteroclitus
ENSFALG00000010618	LSM14B	100	41.495	ENSGMOG00000017115	lsm14b	79	41.899	Gadus_morhua
ENSFALG00000010618	LSM14B	100	93.590	ENSGALG00000005125	LSM14B	91	94.615	Gallus_gallus
ENSFALG00000010618	LSM14B	77	37.124	ENSGAFG00000013723	LSM14B	87	34.058	Gambusia_affinis
ENSFALG00000010618	LSM14B	81	66.019	ENSGAFG00000020318	lsm14b	77	66.019	Gambusia_affinis
ENSFALG00000010618	LSM14B	92	45.580	ENSGACG00000009973	lsm14b	82	45.580	Gasterosteus_aculeatus
ENSFALG00000010618	LSM14B	65	86.508	ENSGAGG00000004106	LSM14B	97	86.508	Gopherus_agassizii
ENSFALG00000010618	LSM14B	100	76.227	ENSGGOG00000005630	LSM14B	100	82.468	Gorilla_gorilla
ENSFALG00000010618	LSM14B	100	76.227	ENSHGLG00000015055	LSM14B	100	82.792	Heterocephalus_glaber_female
ENSFALG00000010618	LSM14B	99	74.479	ENSHGLG00100015273	LSM14B	100	82.623	Heterocephalus_glaber_male
ENSFALG00000010618	LSM14B	70	38.603	ENSHCOG00000004867	lsm14b	86	37.906	Hippocampus_comes
ENSFALG00000010618	LSM14B	96	43.182	ENSHCOG00000018747	LSM14B	82	43.989	Hippocampus_comes
ENSFALG00000010618	LSM14B	90	52.676	ENSIPUG00000014946	lsm14b	77	52.198	Ictalurus_punctatus
ENSFALG00000010618	LSM14B	99	77.083	ENSSTOG00000020482	LSM14B	100	83.766	Ictidomys_tridecemlineatus
ENSFALG00000010618	LSM14B	100	76.744	ENSJJAG00000012728	Lsm14b	100	83.442	Jaculus_jaculus
ENSFALG00000010618	LSM14B	90	45.580	ENSKMAG00000017524	lsm14b	82	45.924	Kryptolebias_marmoratus
ENSFALG00000010618	LSM14B	52	43.128	ENSKMAG00000012834	-	88	42.857	Kryptolebias_marmoratus
ENSFALG00000010618	LSM14B	100	71.465	ENSLACG00000003849	LSM14B	91	71.465	Latimeria_chalumnae
ENSFALG00000010618	LSM14B	99	56.345	ENSLOCG00000003746	lsm14b	96	55.867	Lepisosteus_oculatus
ENSFALG00000010618	LSM14B	99	77.403	ENSLAFG00000007492	LSM14B	99	77.403	Loxodonta_africana
ENSFALG00000010618	LSM14B	100	85.530	ENSMFAG00000041479	LSM14B	91	85.530	Macaca_fascicularis
ENSFALG00000010618	LSM14B	100	76.744	ENSMMUG00000014084	LSM14B	90	76.744	Macaca_mulatta
ENSFALG00000010618	LSM14B	100	76.744	ENSMNEG00000045573	LSM14B	90	76.744	Macaca_nemestrina
ENSFALG00000010618	LSM14B	99	76.302	ENSMLEG00000040895	LSM14B	100	76.302	Mandrillus_leucophaeus
ENSFALG00000010618	LSM14B	90	43.889	ENSMAMG00000020539	lsm14b	82	44.110	Mastacembelus_armatus
ENSFALG00000010618	LSM14B	97	43.570	ENSMAMG00000024124	LSM14B	82	42.541	Mastacembelus_armatus
ENSFALG00000010618	LSM14B	90	41.555	ENSMZEG00005000987	lsm14b	81	44.565	Maylandia_zebra
ENSFALG00000010618	LSM14B	93	40.800	ENSMZEG00005026001	LSM14B	85	41.555	Maylandia_zebra
ENSFALG00000010618	LSM14B	100	80.769	ENSMGAG00000005300	LSM14B	98	82.564	Meleagris_gallopavo
ENSFALG00000010618	LSM14B	100	76.744	ENSMAUG00000020700	Lsm14b	100	83.442	Mesocricetus_auratus
ENSFALG00000010618	LSM14B	100	87.080	ENSMICG00000014675	LSM14B	91	87.080	Microcebus_murinus
ENSFALG00000010618	LSM14B	100	76.486	ENSMOCG00000020600	Lsm14b	100	83.117	Microtus_ochrogaster
ENSFALG00000010618	LSM14B	72	70.144	ENSMOCG00000005119	-	93	69.928	Microtus_ochrogaster
ENSFALG00000010618	LSM14B	90	42.975	ENSMMOG00000020042	lsm14b	84	43.750	Mola_mola
ENSFALG00000010618	LSM14B	92	42.541	ENSMMOG00000017321	LSM14B	81	42.541	Mola_mola
ENSFALG00000010618	LSM14B	80	87.987	ENSMODG00000016690	LSM14B	100	87.987	Monodelphis_domestica
ENSFALG00000010618	LSM14B	96	44.205	ENSMALG00000004783	lsm14b	81	43.820	Monopterus_albus
ENSFALG00000010618	LSM14B	93	41.935	ENSMALG00000022251	LSM14B	82	41.962	Monopterus_albus
ENSFALG00000010618	LSM14B	100	85.530	MGP_CAROLIEiJ_G0024770	Lsm14b	91	85.530	Mus_caroli
ENSFALG00000010618	LSM14B	100	76.744	ENSMUSG00000039108	Lsm14b	100	83.117	Mus_musculus
ENSFALG00000010618	LSM14B	100	85.530	MGP_PahariEiJ_G0026214	Lsm14b	91	85.530	Mus_pahari
ENSFALG00000010618	LSM14B	100	85.788	MGP_SPRETEiJ_G0025693	Lsm14b	91	85.788	Mus_spretus
ENSFALG00000010618	LSM14B	99	85.974	ENSMPUG00000007584	LSM14B	95	85.714	Mustela_putorius_furo
ENSFALG00000010618	LSM14B	100	76.031	ENSMLUG00000000304	LSM14B	90	75.773	Myotis_lucifugus
ENSFALG00000010618	LSM14B	60	79.310	ENSNGAG00000016550	Lsm14b	100	79.310	Nannospalax_galili
ENSFALG00000010618	LSM14B	99	77.083	ENSNLEG00000015757	LSM14B	100	77.083	Nomascus_leucogenys
ENSFALG00000010618	LSM14B	69	95.536	ENSMEUG00000008267	-	67	98.113	Notamacropus_eugenii
ENSFALG00000010618	LSM14B	50	95.000	ENSOPRG00000000447	-	59	95.000	Ochotona_princeps
ENSFALG00000010618	LSM14B	100	77.003	ENSODEG00000004099	LSM14B	100	83.766	Octodon_degus
ENSFALG00000010618	LSM14B	90	43.324	ENSONIG00000020318	lsm14b	82	45.968	Oreochromis_niloticus
ENSFALG00000010618	LSM14B	72	65.950	ENSOANG00000003370	LSM14B	86	67.213	Ornithorhynchus_anatinus
ENSFALG00000010618	LSM14B	99	75.325	ENSOCUG00000006279	LSM14B	99	75.325	Oryctolagus_cuniculus
ENSFALG00000010618	LSM14B	93	37.831	ENSORLG00000028353	LSM14B	81	38.251	Oryzias_latipes
ENSFALG00000010618	LSM14B	90	42.975	ENSORLG00000013525	lsm14b	81	45.304	Oryzias_latipes
ENSFALG00000010618	LSM14B	73	34.843	ENSORLG00020018191	-	85	34.066	Oryzias_latipes_hni
ENSFALG00000010618	LSM14B	90	42.975	ENSORLG00020020553	lsm14b	81	45.304	Oryzias_latipes_hni
ENSFALG00000010618	LSM14B	90	43.094	ENSORLG00015016862	lsm14b	81	45.304	Oryzias_latipes_hsok
ENSFALG00000010618	LSM14B	93	37.802	ENSORLG00015013157	LSM14B	81	38.398	Oryzias_latipes_hsok
ENSFALG00000010618	LSM14B	90	42.424	ENSOMEG00000023917	lsm14b	81	44.262	Oryzias_melastigma
ENSFALG00000010618	LSM14B	100	87.080	ENSOGAG00000003915	LSM14B	91	87.080	Otolemur_garnettii
ENSFALG00000010618	LSM14B	99	86.753	ENSOARG00000014706	LSM14B	98	86.753	Ovis_aries
ENSFALG00000010618	LSM14B	100	76.227	ENSPPAG00000035799	LSM14B	78	92.806	Pan_paniscus
ENSFALG00000010618	LSM14B	100	77.261	ENSPPRG00000009197	LSM14B	90	77.261	Panthera_pardus
ENSFALG00000010618	LSM14B	71	83.696	ENSPTIG00000021518	LSM14B	92	83.696	Panthera_tigris_altaica
ENSFALG00000010618	LSM14B	100	76.486	ENSPTRG00000013696	LSM14B	90	76.486	Pan_troglodytes
ENSFALG00000010618	LSM14B	100	76.486	ENSPANG00000011747	LSM14B	90	76.486	Papio_anubis
ENSFALG00000010618	LSM14B	100	54.040	ENSPKIG00000003275	lsm14b	90	54.103	Paramormyrops_kingsleyae
ENSFALG00000010618	LSM14B	100	81.395	ENSPSIG00000014762	LSM14B	100	89.610	Pelodiscus_sinensis
ENSFALG00000010618	LSM14B	100	77.261	ENSPEMG00000017688	Lsm14b	100	83.766	Peromyscus_maniculatus_bairdii
ENSFALG00000010618	LSM14B	100	80.620	ENSPCIG00000013405	LSM14B	90	80.620	Phascolarctos_cinereus
ENSFALG00000010618	LSM14B	100	45.387	ENSPFOG00000005631	lsm14b	82	44.986	Poecilia_formosa
ENSFALG00000010618	LSM14B	100	44.389	ENSPLAG00000002449	lsm14b	81	44.173	Poecilia_latipinna
ENSFALG00000010618	LSM14B	91	41.226	ENSPLAG00000005793	LSM14B	81	41.160	Poecilia_latipinna
ENSFALG00000010618	LSM14B	91	40.503	ENSPMEG00000022953	LSM14B	81	40.720	Poecilia_mexicana
ENSFALG00000010618	LSM14B	100	43.890	ENSPMEG00000000745	lsm14b	81	43.902	Poecilia_mexicana
ENSFALG00000010618	LSM14B	72	37.993	ENSPREG00000007828	LSM14B	87	36.620	Poecilia_reticulata
ENSFALG00000010618	LSM14B	100	78.811	ENSPCOG00000013625	LSM14B	90	78.811	Propithecus_coquereli
ENSFALG00000010618	LSM14B	90	70.370	ENSPVAG00000017918	LSM14B	100	68.661	Pteropus_vampyrus
ENSFALG00000010618	LSM14B	90	52.893	ENSPNAG00000012777	lsm14b	82	52.989	Pygocentrus_nattereri
ENSFALG00000010618	LSM14B	100	85.013	ENSRNOG00000054557	Lsm14b	91	85.013	Rattus_norvegicus
ENSFALG00000010618	LSM14B	99	85.195	ENSRBIG00000033461	LSM14B	99	85.195	Rhinopithecus_bieti
ENSFALG00000010618	LSM14B	100	76.486	ENSRROG00000042949	LSM14B	100	82.468	Rhinopithecus_roxellana
ENSFALG00000010618	LSM14B	99	76.562	ENSSBOG00000032820	LSM14B	100	78.395	Saimiri_boliviensis_boliviensis
ENSFALG00000010618	LSM14B	100	80.362	ENSSHAG00000015528	LSM14B	100	87.338	Sarcophilus_harrisii
ENSFALG00000010618	LSM14B	90	50.556	ENSSFOG00015004627	lsm14b	82	52.186	Scleropages_formosus
ENSFALG00000010618	LSM14B	90	46.154	ENSSMAG00000012725	lsm14b	82	46.341	Scophthalmus_maximus
ENSFALG00000010618	LSM14B	97	46.329	ENSSMAG00000000135	LSM14B	82	45.333	Scophthalmus_maximus
ENSFALG00000010618	LSM14B	93	45.799	ENSSDUG00000022770	LSM14B	82	45.628	Seriola_dumerili
ENSFALG00000010618	LSM14B	90	45.304	ENSSDUG00000020977	lsm14b	82	46.322	Seriola_dumerili
ENSFALG00000010618	LSM14B	72	38.811	ENSSLDG00000011354	-	89	41.696	Seriola_lalandi_dorsalis
ENSFALG00000010618	LSM14B	54	73.832	ENSSARG00000007749	-	100	73.832	Sorex_araneus
ENSFALG00000010618	LSM14B	100	89.974	ENSSPUG00000014360	LSM14B	91	89.974	Sphenodon_punctatus
ENSFALG00000010618	LSM14B	90	45.455	ENSSPAG00000020915	lsm14b	80	44.847	Stegastes_partitus
ENSFALG00000010618	LSM14B	76	37.627	ENSSPAG00000018854	-	88	35.943	Stegastes_partitus
ENSFALG00000010618	LSM14B	100	83.979	ENSSSCG00000026052	LSM14B	100	81.169	Sus_scrofa
ENSFALG00000010618	LSM14B	100	88.889	ENSTGUG00000007884	LSM14B	100	88.889	Taeniopygia_guttata
ENSFALG00000010618	LSM14B	100	44.254	ENSTRUG00000011354	lsm14b	81	45.504	Takifugu_rubripes
ENSFALG00000010618	LSM14B	93	42.742	ENSTRUG00000001529	LSM14B	82	42.005	Takifugu_rubripes
ENSFALG00000010618	LSM14B	92	46.174	ENSTNIG00000002445	lsm14b	82	46.133	Tetraodon_nigroviridis
ENSFALG00000010618	LSM14B	83	70.717	ENSTTRG00000011043	LSM14B	72	69.159	Tursiops_truncatus
ENSFALG00000010618	LSM14B	99	86.753	ENSUAMG00000025298	LSM14B	91	86.753	Ursus_americanus
ENSFALG00000010618	LSM14B	99	86.753	ENSUMAG00000000480	LSM14B	91	86.753	Ursus_maritimus
ENSFALG00000010618	LSM14B	99	76.364	ENSVVUG00000015920	LSM14B	100	82.792	Vulpes_vulpes
ENSFALG00000010618	LSM14B	85	75.075	ENSXETG00000001997	lsm14b	89	75.976	Xenopus_tropicalis
ENSFALG00000010618	LSM14B	100	43.467	ENSXMAG00000010013	lsm14b	81	42.896	Xiphophorus_maculatus