EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000010764 (Gene tree)
Gene ID: -
Gene Symbol: CSTF3
Alias: CstF-77
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 44080 bases
Position: chrJH603281.1:1781655-1825734
Accession: 2485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000011242	Suf	PF05843.14	1.1e-84	1	1
ENSFALP00000011246	Suf	PF05843.14	5.8e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000011287	CSTF3-201	6134	-	ENSFALP00000011242	718 (aa)	-	U3K888
ENSFALT00000011291	CSTF3-202	1956	-	ENSFALP00000011246	651 (aa)	-	U3K892

Gene Model

Click here to download ENSFALG00000010764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000010764's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000010764	CSTF3	100	96.928	ENSG00000176102	CSTF3	93	98.649	Homo_sapiens
ENSFALG00000010764	CSTF3	100	90.630	ENSAPOG00000014054	cstf3	92	93.816	Acanthochromis_polyacanthus
ENSFALG00000010764	CSTF3	100	97.081	ENSAMEG00000007187	CSTF3	93	98.649	Ailuropoda_melanoleuca
ENSFALG00000010764	CSTF3	96	86.240	ENSACIG00000005539	cstf3	100	86.240	Amphilophus_citrinellus
ENSFALG00000010764	CSTF3	100	90.630	ENSAOCG00000010930	cstf3	92	93.665	Amphiprion_ocellaris
ENSFALG00000010764	CSTF3	100	90.630	ENSAPEG00000007903	cstf3	92	93.665	Amphiprion_percula
ENSFALG00000010764	CSTF3	100	91.091	ENSATEG00000000190	cstf3	93	93.976	Anabas_testudineus
ENSFALG00000010764	CSTF3	100	98.003	ENSAPLG00000007217	CSTF3	94	99.248	Anas_platyrhynchos
ENSFALG00000010764	CSTF3	100	95.545	ENSACAG00000002823	CSTF3	93	97.744	Anolis_carolinensis
ENSFALG00000010764	CSTF3	100	96.928	ENSANAG00000020699	CSTF3	100	97.600	Aotus_nancymaae
ENSFALG00000010764	CSTF3	100	90.783	ENSACLG00000007820	cstf3	92	93.967	Astatotilapia_calliptera
ENSFALG00000010764	CSTF3	100	89.264	ENSAMXG00000014198	cstf3	93	92.054	Astyanax_mexicanus
ENSFALG00000010764	CSTF3	100	96.928	ENSBTAG00000008617	CSTF3	97	96.928	Bos_taurus
ENSFALG00000010764	CSTF3	99	48.458	WBGene00006307	suf-1	88	52.778	Caenorhabditis_elegans
ENSFALG00000010764	CSTF3	100	96.928	ENSCJAG00000005533	CSTF3	100	97.600	Callithrix_jacchus
ENSFALG00000010764	CSTF3	100	96.928	ENSCAFG00000007264	CSTF3	93	98.649	Canis_familiaris
ENSFALG00000010764	CSTF3	100	96.928	ENSCAFG00020002715	CSTF3	93	98.501	Canis_lupus_dingo
ENSFALG00000010764	CSTF3	100	95.238	ENSCHIG00000016418	CSTF3	100	97.600	Capra_hircus
ENSFALG00000010764	CSTF3	100	96.621	ENSTSYG00000000451	CSTF3	99	99.333	Carlito_syrichta
ENSFALG00000010764	CSTF3	90	90.024	ENSCAPG00000010958	CSTF3	96	90.024	Cavia_aperea
ENSFALG00000010764	CSTF3	100	96.928	ENSCPOG00000005545	CSTF3	93	98.649	Cavia_porcellus
ENSFALG00000010764	CSTF3	100	96.928	ENSCCAG00000024790	CSTF3	100	97.600	Cebus_capucinus
ENSFALG00000010764	CSTF3	100	96.928	ENSCATG00000007080	CSTF3	100	97.600	Cercocebus_atys
ENSFALG00000010764	CSTF3	100	96.928	ENSCLAG00000016179	CSTF3	93	98.649	Chinchilla_lanigera
ENSFALG00000010764	CSTF3	77	97.608	ENSCHOG00000002497	CSTF3	73	99.624	Choloepus_hoffmanni
ENSFALG00000010764	CSTF3	100	97.542	ENSCPBG00000006753	CSTF3	93	98.799	Chrysemys_picta_bellii
ENSFALG00000010764	CSTF3	100	62.519	ENSCING00000006401	-	91	64.231	Ciona_intestinalis
ENSFALG00000010764	CSTF3	100	61.934	ENSCSAVG00000004851	-	92	63.830	Ciona_savignyi
ENSFALG00000010764	CSTF3	100	96.928	ENSCANG00000035468	CSTF3	100	97.600	Colobus_angolensis_palliatus
ENSFALG00000010764	CSTF3	100	96.774	ENSCGRG00001014773	Cstf3	93	98.649	Cricetulus_griseus_chok1gshd
ENSFALG00000010764	CSTF3	100	96.774	ENSCGRG00000004142	Cstf3	93	98.649	Cricetulus_griseus_crigri
ENSFALG00000010764	CSTF3	100	90.630	ENSCSEG00000014283	cstf3	93	93.675	Cynoglossus_semilaevis
ENSFALG00000010764	CSTF3	100	89.555	ENSCVAG00000019739	cstf3	92	92.760	Cyprinodon_variegatus
ENSFALG00000010764	CSTF3	100	90.630	ENSDARG00000018904	cstf3	93	93.393	Danio_rerio
ENSFALG00000010764	CSTF3	100	96.467	ENSDNOG00000007366	CSTF3	93	98.201	Dasypus_novemcinctus
ENSFALG00000010764	CSTF3	100	88.344	ENSDORG00000005898	Cstf3	93	90.240	Dipodomys_ordii
ENSFALG00000010764	CSTF3	99	58.921	FBgn0003559	su(f)	90	58.921	Drosophila_melanogaster
ENSFALG00000010764	CSTF3	99	92.212	ENSETEG00000017097	CSTF3	90	92.212	Echinops_telfairi
ENSFALG00000010764	CSTF3	87	73.274	ENSEBUG00000015459	cstf3	96	74.050	Eptatretus_burgeri
ENSFALG00000010764	CSTF3	100	97.081	ENSEASG00005019884	CSTF3	98	98.472	Equus_asinus_asinus
ENSFALG00000010764	CSTF3	100	97.081	ENSECAG00000023338	CSTF3	98	98.472	Equus_caballus
ENSFALG00000010764	CSTF3	100	90.937	ENSEEUG00000015167	CSTF3	93	92.793	Erinaceus_europaeus
ENSFALG00000010764	CSTF3	100	88.633	ENSELUG00000023393	cstf3	93	91.880	Esox_lucius
ENSFALG00000010764	CSTF3	100	96.928	ENSFCAG00000030711	CSTF3	93	98.649	Felis_catus
ENSFALG00000010764	CSTF3	100	96.928	ENSFDAG00000012082	CSTF3	93	98.649	Fukomys_damarensis
ENSFALG00000010764	CSTF3	100	89.862	ENSFHEG00000020623	cstf3	94	91.691	Fundulus_heteroclitus
ENSFALG00000010764	CSTF3	100	88.957	ENSGMOG00000012275	cstf3	92	92.018	Gadus_morhua
ENSFALG00000010764	CSTF3	100	98.464	ENSGALG00000011685	CSTF3	93	99.399	Gallus_gallus
ENSFALG00000010764	CSTF3	100	90.015	ENSGAFG00000002181	cstf3	93	93.072	Gambusia_affinis
ENSFALG00000010764	CSTF3	100	89.708	ENSGACG00000015997	cstf3	93	92.922	Gasterosteus_aculeatus
ENSFALG00000010764	CSTF3	100	97.542	ENSGAGG00000006200	CSTF3	93	98.799	Gopherus_agassizii
ENSFALG00000010764	CSTF3	100	90.476	ENSGGOG00000026591	CSTF3	97	93.435	Gorilla_gorilla
ENSFALG00000010764	CSTF3	100	90.783	ENSHBUG00000016656	cstf3	92	93.967	Haplochromis_burtoni
ENSFALG00000010764	CSTF3	100	96.928	ENSHGLG00000017834	CSTF3	93	98.797	Heterocephalus_glaber_female
ENSFALG00000010764	CSTF3	100	96.928	ENSHGLG00100018042	CSTF3	93	98.797	Heterocephalus_glaber_male
ENSFALG00000010764	CSTF3	100	87.558	ENSHCOG00000015218	cstf3	92	90.649	Hippocampus_comes
ENSFALG00000010764	CSTF3	100	89.555	ENSIPUG00000013170	CSTF3	93	92.436	Ictalurus_punctatus
ENSFALG00000010764	CSTF3	100	96.928	ENSSTOG00000013306	CSTF3	93	98.649	Ictidomys_tridecemlineatus
ENSFALG00000010764	CSTF3	100	84.025	ENSJJAG00000018430	Cstf3	92	86.036	Jaculus_jaculus
ENSFALG00000010764	CSTF3	100	89.094	ENSKMAG00000010916	cstf3	92	92.157	Kryptolebias_marmoratus
ENSFALG00000010764	CSTF3	100	89.401	ENSLBEG00000002306	cstf3	93	92.900	Labrus_bergylta
ENSFALG00000010764	CSTF3	100	92.780	ENSLACG00000017296	CSTF3	93	94.595	Latimeria_chalumnae
ENSFALG00000010764	CSTF3	100	92.320	ENSLOCG00000004415	cstf3	93	94.294	Lepisosteus_oculatus
ENSFALG00000010764	CSTF3	100	96.928	ENSLAFG00000008712	CSTF3	93	98.498	Loxodonta_africana
ENSFALG00000010764	CSTF3	100	96.928	ENSMFAG00000029516	CSTF3	100	97.600	Macaca_fascicularis
ENSFALG00000010764	CSTF3	100	96.928	ENSMMUG00000002542	CSTF3	93	98.649	Macaca_mulatta
ENSFALG00000010764	CSTF3	100	96.928	ENSMNEG00000021807	CSTF3	100	97.600	Macaca_nemestrina
ENSFALG00000010764	CSTF3	100	96.928	ENSMLEG00000039594	CSTF3	100	97.600	Mandrillus_leucophaeus
ENSFALG00000010764	CSTF3	100	90.476	ENSMAMG00000020423	cstf3	92	93.514	Mastacembelus_armatus
ENSFALG00000010764	CSTF3	100	90.783	ENSMZEG00005012082	cstf3	92	93.967	Maylandia_zebra
ENSFALG00000010764	CSTF3	100	98.464	ENSMGAG00000001383	CSTF3	93	99.399	Meleagris_gallopavo
ENSFALG00000010764	CSTF3	100	96.621	ENSMAUG00000002487	Cstf3	93	98.498	Mesocricetus_auratus
ENSFALG00000010764	CSTF3	100	96.928	ENSMICG00000004784	CSTF3	100	97.600	Microcebus_murinus
ENSFALG00000010764	CSTF3	100	96.774	ENSMOCG00000017583	Cstf3	93	98.649	Microtus_ochrogaster
ENSFALG00000010764	CSTF3	100	90.323	ENSMMOG00000016026	cstf3	91	91.605	Mola_mola
ENSFALG00000010764	CSTF3	100	83.103	ENSMODG00000025205	-	93	85.994	Monodelphis_domestica
ENSFALG00000010764	CSTF3	100	96.313	ENSMODG00000009745	-	93	98.348	Monodelphis_domestica
ENSFALG00000010764	CSTF3	100	90.323	ENSMALG00000012050	cstf3	92	93.363	Monopterus_albus
ENSFALG00000010764	CSTF3	100	96.774	MGP_CAROLIEiJ_G0024026	Cstf3	93	98.649	Mus_caroli
ENSFALG00000010764	CSTF3	100	96.774	ENSMUSG00000027176	Cstf3	93	98.649	Mus_musculus
ENSFALG00000010764	CSTF3	100	96.774	MGP_PahariEiJ_G0025464	Cstf3	93	98.649	Mus_pahari
ENSFALG00000010764	CSTF3	100	96.774	MGP_SPRETEiJ_G0024939	Cstf3	93	98.649	Mus_spretus
ENSFALG00000010764	CSTF3	100	97.081	ENSMPUG00000011457	CSTF3	93	98.649	Mustela_putorius_furo
ENSFALG00000010764	CSTF3	100	96.928	ENSMLUG00000003073	-	94	97.774	Myotis_lucifugus
ENSFALG00000010764	CSTF3	100	94.624	ENSMLUG00000026022	-	93	95.495	Myotis_lucifugus
ENSFALG00000010764	CSTF3	100	97.081	ENSNGAG00000010677	Cstf3	93	98.649	Nannospalax_galili
ENSFALG00000010764	CSTF3	96	91.200	ENSNBRG00000007345	cstf3	100	91.200	Neolamprologus_brichardi
ENSFALG00000010764	CSTF3	100	96.928	ENSNLEG00000017901	CSTF3	100	97.600	Nomascus_leucogenys
ENSFALG00000010764	CSTF3	80	94.646	ENSMEUG00000005640	-	100	94.646	Notamacropus_eugenii
ENSFALG00000010764	CSTF3	60	98.507	ENSOPRG00000000199	-	60	98.507	Ochotona_princeps
ENSFALG00000010764	CSTF3	100	96.928	ENSODEG00000016737	-	93	98.649	Octodon_degus
ENSFALG00000010764	CSTF3	98	85.377	ENSODEG00000006311	-	97	85.377	Octodon_degus
ENSFALG00000010764	CSTF3	100	90.783	ENSONIG00000005563	cstf3	92	93.967	Oreochromis_niloticus
ENSFALG00000010764	CSTF3	99	96.769	ENSOANG00000015140	CSTF3	100	96.769	Ornithorhynchus_anatinus
ENSFALG00000010764	CSTF3	100	96.928	ENSOCUG00000015417	CSTF3	93	98.649	Oryctolagus_cuniculus
ENSFALG00000010764	CSTF3	100	90.323	ENSORLG00000009762	cstf3	93	93.072	Oryzias_latipes
ENSFALG00000010764	CSTF3	100	90.323	ENSORLG00020005540	cstf3	93	93.072	Oryzias_latipes_hni
ENSFALG00000010764	CSTF3	100	90.169	ENSORLG00015003551	cstf3	93	92.922	Oryzias_latipes_hsok
ENSFALG00000010764	CSTF3	100	89.708	ENSOMEG00000003848	cstf3	93	92.900	Oryzias_melastigma
ENSFALG00000010764	CSTF3	100	96.636	ENSOGAG00000010229	CSTF3	93	98.206	Otolemur_garnettii
ENSFALG00000010764	CSTF3	99	97.512	ENSOARG00000017271	CSTF3	99	97.512	Ovis_aries
ENSFALG00000010764	CSTF3	100	93.088	ENSPPAG00000027358	CSTF3	94	94.205	Pan_paniscus
ENSFALG00000010764	CSTF3	100	96.928	ENSPPRG00000016852	CSTF3	93	98.649	Panthera_pardus
ENSFALG00000010764	CSTF3	100	96.928	ENSPTIG00000008716	CSTF3	93	98.649	Panthera_tigris_altaica
ENSFALG00000010764	CSTF3	100	96.928	ENSPTRG00000003485	CSTF3	93	98.649	Pan_troglodytes
ENSFALG00000010764	CSTF3	100	96.928	ENSPANG00000013722	CSTF3	97	97.111	Papio_anubis
ENSFALG00000010764	CSTF3	100	91.398	ENSPKIG00000023648	cstf3	93	93.994	Paramormyrops_kingsleyae
ENSFALG00000010764	CSTF3	100	97.235	ENSPSIG00000009173	CSTF3	93	98.498	Pelodiscus_sinensis
ENSFALG00000010764	CSTF3	75	95.733	ENSPMGG00000000164	cstf3	98	95.733	Periophthalmus_magnuspinnatus
ENSFALG00000010764	CSTF3	100	96.621	ENSPEMG00000011481	Cstf3	93	98.498	Peromyscus_maniculatus_bairdii
ENSFALG00000010764	CSTF3	100	80.611	ENSPMAG00000007282	cstf3	93	82.583	Petromyzon_marinus
ENSFALG00000010764	CSTF3	100	80.368	ENSPCIG00000030419	-	83	83.158	Phascolarctos_cinereus
ENSFALG00000010764	CSTF3	100	93.558	ENSPCIG00000026406	-	100	96.800	Phascolarctos_cinereus
ENSFALG00000010764	CSTF3	100	90.169	ENSPFOG00000017239	cstf3	93	93.223	Poecilia_formosa
ENSFALG00000010764	CSTF3	100	90.323	ENSPLAG00000009456	cstf3	93	93.373	Poecilia_latipinna
ENSFALG00000010764	CSTF3	100	90.169	ENSPMEG00000010320	cstf3	93	93.223	Poecilia_mexicana
ENSFALG00000010764	CSTF3	100	90.169	ENSPREG00000013549	cstf3	93	93.223	Poecilia_reticulata
ENSFALG00000010764	CSTF3	100	96.928	ENSPPYG00000003375	CSTF3	93	98.649	Pongo_abelii
ENSFALG00000010764	CSTF3	70	99.303	ENSPCAG00000008025	-	70	99.303	Procavia_capensis
ENSFALG00000010764	CSTF3	100	91.244	ENSPCOG00000014417	CSTF3	93	92.943	Propithecus_coquereli
ENSFALG00000010764	CSTF3	100	90.937	ENSPVAG00000002350	CSTF3	93	92.793	Pteropus_vampyrus
ENSFALG00000010764	CSTF3	100	90.783	ENSPNYG00000018259	cstf3	92	93.967	Pundamilia_nyererei
ENSFALG00000010764	CSTF3	100	90.783	ENSPNAG00000020182	cstf3	93	93.835	Pygocentrus_nattereri
ENSFALG00000010764	CSTF3	96	97.120	ENSRNOG00000012089	Cstf3	100	97.120	Rattus_norvegicus
ENSFALG00000010764	CSTF3	100	95.392	ENSRBIG00000044258	CSTF3	100	97.600	Rhinopithecus_bieti
ENSFALG00000010764	CSTF3	100	96.928	ENSRROG00000043450	CSTF3	100	97.600	Rhinopithecus_roxellana
ENSFALG00000010764	CSTF3	100	96.928	ENSSBOG00000024764	CSTF3	100	97.600	Saimiri_boliviensis_boliviensis
ENSFALG00000010764	CSTF3	100	84.178	ENSSHAG00000003135	-	92	87.801	Sarcophilus_harrisii
ENSFALG00000010764	CSTF3	100	96.006	ENSSHAG00000018128	-	93	97.901	Sarcophilus_harrisii
ENSFALG00000010764	CSTF3	100	92.166	ENSSFOG00015022133	cstf3	93	94.144	Scleropages_formosus
ENSFALG00000010764	CSTF3	100	89.862	ENSSMAG00000002197	cstf3	95	94.516	Scophthalmus_maximus
ENSFALG00000010764	CSTF3	100	90.783	ENSSDUG00000020426	cstf3	92	93.816	Seriola_dumerili
ENSFALG00000010764	CSTF3	100	90.783	ENSSLDG00000025649	cstf3	94	92.438	Seriola_lalandi_dorsalis
ENSFALG00000010764	CSTF3	100	96.928	ENSSARG00000000391	CSTF3	93	98.348	Sorex_araneus
ENSFALG00000010764	CSTF3	100	96.621	ENSSPUG00000010546	CSTF3	94	98.148	Sphenodon_punctatus
ENSFALG00000010764	CSTF3	100	90.476	ENSSPAG00000004958	cstf3	92	93.665	Stegastes_partitus
ENSFALG00000010764	CSTF3	100	96.774	ENSSSCG00000040954	CSTF3	93	98.498	Sus_scrofa
ENSFALG00000010764	CSTF3	100	99.232	ENSTGUG00000005010	CSTF3	94	99.850	Taeniopygia_guttata
ENSFALG00000010764	CSTF3	100	89.094	ENSTRUG00000004959	cstf3	93	92.169	Takifugu_rubripes
ENSFALG00000010764	CSTF3	100	89.555	ENSTNIG00000013811	cstf3	94	91.407	Tetraodon_nigroviridis
ENSFALG00000010764	CSTF3	99	94.704	ENSTBEG00000001544	CSTF3	90	94.704	Tupaia_belangeri
ENSFALG00000010764	CSTF3	100	93.856	ENSTTRG00000016366	CSTF3	93	95.646	Tursiops_truncatus
ENSFALG00000010764	CSTF3	100	96.928	ENSUMAG00000018971	CSTF3	100	97.600	Ursus_maritimus
ENSFALG00000010764	CSTF3	100	96.774	ENSVPAG00000007800	CSTF3	93	98.498	Vicugna_pacos
ENSFALG00000010764	CSTF3	100	96.928	ENSVVUG00000014938	CSTF3	100	97.600	Vulpes_vulpes
ENSFALG00000010764	CSTF3	66	43.478	ENSXETG00000017946	-	99	43.478	Xenopus_tropicalis
ENSFALG00000010764	CSTF3	97	79.812	ENSXETG00000021399	cstf3	100	80.906	Xenopus_tropicalis
ENSFALG00000010764	CSTF3	96	90.080	ENSXCOG00000011741	cstf3	100	90.080	Xiphophorus_couchianus
ENSFALG00000010764	CSTF3	100	90.169	ENSXMAG00000009545	cstf3	93	93.223	Xiphophorus_maculatus