EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000010805 (Gene tree)
Gene ID: -
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 14123 bases
Position: chrJH603232.1:4152645-4166767
Accession: 15818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000011278	RRM_1	PF00076.22	4.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000011323	RBM38-201	646	-	ENSFALP00000011278	191 (aa)	-	U3K8C4

Gene Model

Click here to download ENSFALG00000010805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000010805's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000010805	RBM38	85	80.120	ENSFALG00000013398	RBM24	68	80.473

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000010805	RBM38	99	80.208	ENSG00000132819	RBM38	94	91.379	Homo_sapiens
ENSFALG00000010805	RBM38	88	74.118	ENSAPOG00000009939	-	77	77.326	Acanthochromis_polyacanthus
ENSFALG00000010805	RBM38	90	68.927	ENSAPOG00000003301	rbm38	70	69.663	Acanthochromis_polyacanthus
ENSFALG00000010805	RBM38	90	66.477	ENSACIG00000000010	rbm38	69	67.232	Amphilophus_citrinellus
ENSFALG00000010805	RBM38	92	73.184	ENSACIG00000012502	-	100	86.325	Amphilophus_citrinellus
ENSFALG00000010805	RBM38	93	70.166	ENSAOCG00000012559	RBM38	78	74.586	Amphiprion_ocellaris
ENSFALG00000010805	RBM38	90	69.492	ENSAOCG00000013497	-	70	70.225	Amphiprion_ocellaris
ENSFALG00000010805	RBM38	90	69.492	ENSAPEG00000013137	rbm38	75	69.492	Amphiprion_percula
ENSFALG00000010805	RBM38	88	72.353	ENSAPEG00000023581	-	69	76.744	Amphiprion_percula
ENSFALG00000010805	RBM38	88	75.882	ENSATEG00000016710	-	69	77.326	Anabas_testudineus
ENSFALG00000010805	RBM38	90	68.927	ENSATEG00000016366	rbm38	75	68.927	Anabas_testudineus
ENSFALG00000010805	RBM38	98	78.462	ENSACAG00000016238	RBM38	72	86.047	Anolis_carolinensis
ENSFALG00000010805	RBM38	90	84.971	ENSANAG00000031959	RBM38	85	93.204	Aotus_nancymaae
ENSFALG00000010805	RBM38	92	72.626	ENSACLG00000019514	-	73	74.033	Astatotilapia_calliptera
ENSFALG00000010805	RBM38	87	69.643	ENSAMXG00000038120	rbm38	71	69.643	Astyanax_mexicanus
ENSFALG00000010805	RBM38	92	73.333	ENSAMXG00000015601	-	71	75.882	Astyanax_mexicanus
ENSFALG00000010805	RBM38	99	78.646	ENSBTAG00000008105	RBM38	74	82.022	Bos_taurus
ENSFALG00000010805	RBM38	68	66.154	WBGene00006321	sup-12	59	85.393	Caenorhabditis_elegans
ENSFALG00000010805	RBM38	93	84.358	ENSCJAG00000019139	RBM38	85	93.204	Callithrix_jacchus
ENSFALG00000010805	RBM38	93	83.240	ENSCAFG00020021943	RBM38	74	83.146	Canis_lupus_dingo
ENSFALG00000010805	RBM38	99	78.125	ENSCHIG00000002609	RBM38	74	81.461	Capra_hircus
ENSFALG00000010805	RBM38	99	81.250	ENSCPOG00000012781	RBM38	74	84.831	Cavia_porcellus
ENSFALG00000010805	RBM38	93	84.358	ENSCCAG00000036872	RBM38	85	93.204	Cebus_capucinus
ENSFALG00000010805	RBM38	93	83.799	ENSCATG00000032133	RBM38	85	93.204	Cercocebus_atys
ENSFALG00000010805	RBM38	93	84.916	ENSCLAG00000005906	RBM38	77	84.831	Chinchilla_lanigera
ENSFALG00000010805	RBM38	93	83.799	ENSCSAG00000015503	RBM38	75	83.708	Chlorocebus_sabaeus
ENSFALG00000010805	RBM38	90	94.186	ENSCPBG00000024059	RBM38	80	94.186	Chrysemys_picta_bellii
ENSFALG00000010805	RBM38	78	62.420	ENSCING00000025102	-	68	62.420	Ciona_intestinalis
ENSFALG00000010805	RBM38	79	62.420	ENSCSAVG00000001132	-	59	62.420	Ciona_savignyi
ENSFALG00000010805	RBM38	99	61.979	ENSCANG00000030105	-	64	64.045	Colobus_angolensis_palliatus
ENSFALG00000010805	RBM38	93	80.447	ENSCGRG00001012928	Rbm38	75	80.337	Cricetulus_griseus_chok1gshd
ENSFALG00000010805	RBM38	76	67.785	ENSCSEG00000020943	rbm38	56	62.941	Cynoglossus_semilaevis
ENSFALG00000010805	RBM38	94	73.077	ENSCSEG00000004701	-	78	76.111	Cynoglossus_semilaevis
ENSFALG00000010805	RBM38	88	76.744	ENSCVAG00000005472	-	69	76.744	Cyprinodon_variegatus
ENSFALG00000010805	RBM38	88	67.816	ENSCVAG00000015952	rbm38	68	68.571	Cyprinodon_variegatus
ENSFALG00000010805	RBM38	91	73.743	ENSDARG00000058818	rbm38	75	73.743	Danio_rerio
ENSFALG00000010805	RBM38	90	84.393	ENSDNOG00000032004	RBM38	83	84.393	Dasypus_novemcinctus
ENSFALG00000010805	RBM38	61	79.487	ENSEBUG00000015164	rbm38	60	89.796	Eptatretus_burgeri
ENSFALG00000010805	RBM38	93	82.123	ENSECAG00000007700	RBM38	74	82.022	Equus_caballus
ENSFALG00000010805	RBM38	91	81.143	ENSEEUG00000013489	RBM38	74	81.921	Erinaceus_europaeus
ENSFALG00000010805	RBM38	90	71.098	ENSELUG00000000585	-	75	71.098	Esox_lucius
ENSFALG00000010805	RBM38	90	72.222	ENSELUG00000005849	-	73	73.889	Esox_lucius
ENSFALG00000010805	RBM38	99	79.688	ENSFCAG00000042916	RBM38	85	92.233	Felis_catus
ENSFALG00000010805	RBM38	88	67.630	ENSFHEG00000017748	rbm38	69	68.391	Fundulus_heteroclitus
ENSFALG00000010805	RBM38	88	75.000	ENSFHEG00000006160	-	75	75.000	Fundulus_heteroclitus
ENSFALG00000010805	RBM38	90	70.857	ENSGMOG00000016655	-	94	73.295	Gadus_morhua
ENSFALG00000010805	RBM38	90	95.349	ENSGALG00000026081	RBM38	80	95.349	Gallus_gallus
ENSFALG00000010805	RBM38	88	72.353	ENSGACG00000009873	-	78	75.000	Gasterosteus_aculeatus
ENSFALG00000010805	RBM38	90	70.690	ENSGACG00000015224	rbm38	83	70.690	Gasterosteus_aculeatus
ENSFALG00000010805	RBM38	90	93.023	ENSGAGG00000001187	RBM38	80	93.023	Gopherus_agassizii
ENSFALG00000010805	RBM38	94	64.550	ENSHBUG00000012058	rbm38	73	68.182	Haplochromis_burtoni
ENSFALG00000010805	RBM38	92	72.626	ENSHBUG00000011778	-	77	74.033	Haplochromis_burtoni
ENSFALG00000010805	RBM38	89	83.041	ENSHGLG00000015077	RBM38	74	84.091	Heterocephalus_glaber_female
ENSFALG00000010805	RBM38	82	65.385	ENSHCOG00000019040	rbm38	65	65.385	Hippocampus_comes
ENSFALG00000010805	RBM38	90	75.141	ENSHCOG00000005622	-	50	76.271	Hippocampus_comes
ENSFALG00000010805	RBM38	88	76.923	ENSIPUG00000019349	-	70	76.923	Ictalurus_punctatus
ENSFALG00000010805	RBM38	87	60.335	ENSKMAG00000012402	rbm38	74	61.017	Kryptolebias_marmoratus
ENSFALG00000010805	RBM38	90	68.927	ENSLBEG00000018878	rbm38	70	68.927	Labrus_bergylta
ENSFALG00000010805	RBM38	92	70.556	ENSLBEG00000016163	RBM38	77	75.138	Labrus_bergylta
ENSFALG00000010805	RBM38	90	80.925	ENSLOCG00000003456	rbm38	74	80.925	Lepisosteus_oculatus
ENSFALG00000010805	RBM38	93	83.799	ENSMFAG00000043808	RBM38	85	93.204	Macaca_fascicularis
ENSFALG00000010805	RBM38	93	83.799	ENSMMUG00000031391	RBM38	85	93.204	Macaca_mulatta
ENSFALG00000010805	RBM38	93	83.799	ENSMNEG00000034683	RBM38	85	93.204	Macaca_nemestrina
ENSFALG00000010805	RBM38	61	74.138	ENSMLEG00000043261	-	94	74.138	Mandrillus_leucophaeus
ENSFALG00000010805	RBM38	90	68.182	ENSMAMG00000024135	rbm38	69	68.182	Mastacembelus_armatus
ENSFALG00000010805	RBM38	88	75.294	ENSMAMG00000020499	RBM38	70	76.744	Mastacembelus_armatus
ENSFALG00000010805	RBM38	90	67.614	ENSMZEG00005026036	rbm38	70	68.362	Maylandia_zebra
ENSFALG00000010805	RBM38	92	72.626	ENSMZEG00005000849	-	77	74.033	Maylandia_zebra
ENSFALG00000010805	RBM38	93	81.006	ENSMAUG00000021211	Rbm38	75	80.899	Mesocricetus_auratus
ENSFALG00000010805	RBM38	90	84.971	ENSMICG00000038011	RBM38	80	84.971	Microcebus_murinus
ENSFALG00000010805	RBM38	92	81.461	ENSMOCG00000008715	Rbm38	75	81.461	Microtus_ochrogaster
ENSFALG00000010805	RBM38	93	72.678	ENSMMOG00000020051	-	77	75.141	Mola_mola
ENSFALG00000010805	RBM38	91	90.286	ENSMODG00000016458	RBM38	75	90.286	Monodelphis_domestica
ENSFALG00000010805	RBM38	79	68.387	ENSMALG00000022327	rbm38	67	68.387	Monopterus_albus
ENSFALG00000010805	RBM38	90	75.706	ENSMALG00000004680	RBM38	66	75.706	Monopterus_albus
ENSFALG00000010805	RBM38	88	81.287	MGP_CAROLIEiJ_G0024745	Rbm38	75	82.022	Mus_caroli
ENSFALG00000010805	RBM38	88	81.287	ENSMUSG00000027510	Rbm38	75	82.022	Mus_musculus
ENSFALG00000010805	RBM38	88	81.871	MGP_PahariEiJ_G0026186	Rbm38	75	82.584	Mus_pahari
ENSFALG00000010805	RBM38	88	81.287	MGP_SPRETEiJ_G0025665	Rbm38	75	82.022	Mus_spretus
ENSFALG00000010805	RBM38	90	83.815	ENSMPUG00000006518	RBM38	86	83.815	Mustela_putorius_furo
ENSFALG00000010805	RBM38	90	80.925	ENSMLUG00000011140	RBM38	80	80.925	Myotis_lucifugus
ENSFALG00000010805	RBM38	92	72.626	ENSNBRG00000022545	-	73	74.033	Neolamprologus_brichardi
ENSFALG00000010805	RBM38	95	64.921	ENSNBRG00000022685	rbm38	73	68.927	Neolamprologus_brichardi
ENSFALG00000010805	RBM38	61	88.889	ENSMEUG00000005475	-	88	88.889	Notamacropus_eugenii
ENSFALG00000010805	RBM38	99	81.250	ENSODEG00000007980	RBM38	74	84.831	Octodon_degus
ENSFALG00000010805	RBM38	92	72.626	ENSONIG00000020324	-	73	74.033	Oreochromis_niloticus
ENSFALG00000010805	RBM38	90	68.182	ENSONIG00000017073	rbm38	71	68.927	Oreochromis_niloticus
ENSFALG00000010805	RBM38	95	86.339	ENSOANG00000009259	RBM38	68	89.143	Ornithorhynchus_anatinus
ENSFALG00000010805	RBM38	90	71.591	ENSORLG00000027180	-	71	75.141	Oryzias_latipes
ENSFALG00000010805	RBM38	89	65.341	ENSORLG00000012154	rbm38	69	65.341	Oryzias_latipes
ENSFALG00000010805	RBM38	89	66.102	ENSORLG00020017871	rbm38	69	66.102	Oryzias_latipes_hni
ENSFALG00000010805	RBM38	95	68.649	ENSORLG00020020751	-	71	75.141	Oryzias_latipes_hni
ENSFALG00000010805	RBM38	89	65.909	ENSORLG00015012606	rbm38	71	65.294	Oryzias_latipes_hsok
ENSFALG00000010805	RBM38	90	72.000	ENSORLG00015017040	-	71	75.141	Oryzias_latipes_hsok
ENSFALG00000010805	RBM38	90	72.571	ENSOMEG00000023912	-	71	75.706	Oryzias_melastigma
ENSFALG00000010805	RBM38	89	66.477	ENSOMEG00000006805	rbm38	69	66.477	Oryzias_melastigma
ENSFALG00000010805	RBM38	94	83.516	ENSOGAG00000029136	RBM38	74	84.270	Otolemur_garnettii
ENSFALG00000010805	RBM38	99	79.688	ENSPPRG00000009507	RBM38	85	92.233	Panthera_pardus
ENSFALG00000010805	RBM38	92	83.616	ENSPTRG00000013661	RBM38	85	93.204	Pan_troglodytes
ENSFALG00000010805	RBM38	65	91.129	ENSPTRG00000045845	-	68	91.129	Pan_troglodytes
ENSFALG00000010805	RBM38	93	83.799	ENSPANG00000020919	-	85	93.204	Papio_anubis
ENSFALG00000010805	RBM38	98	66.667	ENSPANG00000033127	-	73	67.416	Papio_anubis
ENSFALG00000010805	RBM38	90	73.034	ENSPKIG00000025417	rbm38	75	71.429	Paramormyrops_kingsleyae
ENSFALG00000010805	RBM38	91	73.446	ENSPKIG00000018122	-	95	87.387	Paramormyrops_kingsleyae
ENSFALG00000010805	RBM38	95	87.701	ENSPSIG00000011649	RBM38	74	92.442	Pelodiscus_sinensis
ENSFALG00000010805	RBM38	88	72.093	ENSPMGG00000017094	-	69	72.989	Periophthalmus_magnuspinnatus
ENSFALG00000010805	RBM38	90	66.857	ENSPMGG00000011343	rbm38	70	67.429	Periophthalmus_magnuspinnatus
ENSFALG00000010805	RBM38	91	89.714	ENSPCIG00000013648	RBM38	75	89.714	Phascolarctos_cinereus
ENSFALG00000010805	RBM38	88	64.571	ENSPFOG00000011658	rbm38	69	68.750	Poecilia_formosa
ENSFALG00000010805	RBM38	88	66.286	ENSPLAG00000005218	rbm38	69	68.750	Poecilia_latipinna
ENSFALG00000010805	RBM38	88	76.301	ENSPLAG00000002500	-	69	76.301	Poecilia_latipinna
ENSFALG00000010805	RBM38	88	64.571	ENSPMEG00000015770	rbm38	69	68.750	Poecilia_mexicana
ENSFALG00000010805	RBM38	88	65.143	ENSPREG00000007398	rbm38	69	69.318	Poecilia_reticulata
ENSFALG00000010805	RBM38	94	82.967	ENSPCOG00000026201	RBM38	84	92.233	Propithecus_coquereli
ENSFALG00000010805	RBM38	99	50.785	ENSPVAG00000006457	RBM38	74	51.977	Pteropus_vampyrus
ENSFALG00000010805	RBM38	95	70.811	ENSPNYG00000019727	-	100	85.470	Pundamilia_nyererei
ENSFALG00000010805	RBM38	93	64.516	ENSPNYG00000021373	rbm38	74	67.797	Pundamilia_nyererei
ENSFALG00000010805	RBM38	91	72.778	ENSPNAG00000010596	rbm38	76	72.778	Pygocentrus_nattereri
ENSFALG00000010805	RBM38	88	74.556	ENSPNAG00000015123	-	96	73.485	Pygocentrus_nattereri
ENSFALG00000010805	RBM38	92	82.022	ENSRNOG00000006420	Rbm38	75	82.022	Rattus_norvegicus
ENSFALG00000010805	RBM38	99	66.667	ENSRROG00000036388	-	79	65.333	Rhinopithecus_roxellana
ENSFALG00000010805	RBM38	90	84.393	ENSSBOG00000031053	RBM38	96	93.204	Saimiri_boliviensis_boliviensis
ENSFALG00000010805	RBM38	87	71.930	ENSSFOG00015004453	rbm38	73	74.713	Scleropages_formosus
ENSFALG00000010805	RBM38	90	68.927	ENSSDUG00000022611	rbm38	70	68.927	Seriola_dumerili
ENSFALG00000010805	RBM38	88	76.744	ENSSDUG00000021082	RBM38	69	76.744	Seriola_dumerili
ENSFALG00000010805	RBM38	90	68.927	ENSSLDG00000010845	rbm38	76	68.927	Seriola_lalandi_dorsalis
ENSFALG00000010805	RBM38	88	76.744	ENSSLDG00000011778	RBM38	69	76.744	Seriola_lalandi_dorsalis
ENSFALG00000010805	RBM38	92	72.067	ENSSPAG00000020989	RBM38	81	75.138	Stegastes_partitus
ENSFALG00000010805	RBM38	90	69.492	ENSSPAG00000011113	rbm38	70	70.225	Stegastes_partitus
ENSFALG00000010805	RBM38	93	83.799	ENSSSCG00000007504	RBM38	74	83.708	Sus_scrofa
ENSFALG00000010805	RBM38	92	73.184	ENSTRUG00000019869	-	71	76.271	Takifugu_rubripes
ENSFALG00000010805	RBM38	90	67.797	ENSTRUG00000024954	rbm38	71	68.539	Takifugu_rubripes
ENSFALG00000010805	RBM38	90	73.714	ENSTNIG00000007093	-	79	75.706	Tetraodon_nigroviridis
ENSFALG00000010805	RBM38	93	83.240	ENSUAMG00000019780	RBM38	74	83.146	Ursus_americanus
ENSFALG00000010805	RBM38	93	83.240	ENSVVUG00000017246	RBM38	74	83.146	Vulpes_vulpes
ENSFALG00000010805	RBM38	90	86.705	ENSXETG00000011268	rbm38	78	86.705	Xenopus_tropicalis
ENSFALG00000010805	RBM38	59	84.746	ENSXCOG00000017324	-	54	84.746	Xiphophorus_couchianus
ENSFALG00000010805	RBM38	88	68.391	ENSXMAG00000023662	rbm38	68	69.143	Xiphophorus_maculatus