EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000011231 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 7276 bases
Position: chrJH603276.1:1474213-1481488
Accession: 101819421
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000011734	FRG1	PF06229.12	2.6e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000011782	-	2168	-	ENSFALP00000011734	255 (aa)	XP_005045241	U3K9N0

Gene Model

Click here to download ENSFALG00000011231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000011231's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000011231	-	88	86.222	ENSG00000109536	FRG1	100	91.379	Homo_sapiens
ENSFALG00000011231	-	87	74.775	ENSAPOG00000001060	frg1	87	74.775	Acanthochromis_polyacanthus
ENSFALG00000011231	-	85	87.671	ENSAMEG00000013503	FRG1	86	86.547	Ailuropoda_melanoleuca
ENSFALG00000011231	-	87	74.775	ENSACIG00000022283	frg1	100	74.775	Amphilophus_citrinellus
ENSFALG00000011231	-	87	74.324	ENSAOCG00000024240	frg1	87	74.324	Amphiprion_ocellaris
ENSFALG00000011231	-	87	74.775	ENSAPEG00000002486	frg1	87	74.775	Amphiprion_percula
ENSFALG00000011231	-	85	73.611	ENSATEG00000010414	frg1	90	73.023	Anabas_testudineus
ENSFALG00000011231	-	93	97.458	ENSAPLG00000007785	-	92	97.458	Anas_platyrhynchos
ENSFALG00000011231	-	88	83.482	ENSACAG00000006877	-	87	83.333	Anolis_carolinensis
ENSFALG00000011231	-	85	87.215	ENSANAG00000020876	FRG1	87	86.099	Aotus_nancymaae
ENSFALG00000011231	-	84	73.364	ENSACLG00000027065	frg1	88	73.364	Astatotilapia_calliptera
ENSFALG00000011231	-	86	73.636	ENSAMXG00000032700	frg1	87	73.094	Astyanax_mexicanus
ENSFALG00000011231	-	85	87.671	ENSBTAG00000007089	FRG1	86	86.547	Bos_taurus
ENSFALG00000011231	-	83	41.410	WBGene00014177	frg-1	82	41.410	Caenorhabditis_elegans
ENSFALG00000011231	-	85	87.215	ENSCJAG00000011272	FRG1	94	84.574	Callithrix_jacchus
ENSFALG00000011231	-	85	87.671	ENSCAFG00000007135	FRG1	86	86.547	Canis_familiaris
ENSFALG00000011231	-	83	87.736	ENSCAFG00020000082	-	85	87.736	Canis_lupus_dingo
ENSFALG00000011231	-	85	87.671	ENSCHIG00000011585	-	86	86.547	Capra_hircus
ENSFALG00000011231	-	87	61.607	ENSTSYG00000031599	-	87	61.435	Carlito_syrichta
ENSFALG00000011231	-	89	85.526	ENSCAPG00000016056	-	91	86.099	Cavia_aperea
ENSFALG00000011231	-	85	87.215	ENSCPOG00000022277	-	87	86.099	Cavia_porcellus
ENSFALG00000011231	-	85	87.215	ENSCCAG00000024627	FRG1	87	86.099	Cebus_capucinus
ENSFALG00000011231	-	88	85.841	ENSCATG00000029230	FRG1	86	85.650	Cercocebus_atys
ENSFALG00000011231	-	84	61.574	ENSCLAG00000009263	-	82	61.574	Chinchilla_lanigera
ENSFALG00000011231	-	85	87.215	ENSCLAG00000000370	-	87	86.099	Chinchilla_lanigera
ENSFALG00000011231	-	88	59.375	ENSCLAG00000006068	-	86	59.009	Chinchilla_lanigera
ENSFALG00000011231	-	85	72.146	ENSCLAG00000004960	-	85	71.300	Chinchilla_lanigera
ENSFALG00000011231	-	84	80.556	ENSCSAG00000017729	-	100	80.556	Chlorocebus_sabaeus
ENSFALG00000011231	-	88	85.841	ENSCSAG00000002899	FRG1	86	85.650	Chlorocebus_sabaeus
ENSFALG00000011231	-	96	88.163	ENSCPBG00000009211	-	95	88.163	Chrysemys_picta_bellii
ENSFALG00000011231	-	88	52.632	ENSCING00000005161	-	83	53.604	Ciona_intestinalis
ENSFALG00000011231	-	51	53.435	ENSCSAVG00000008018	-	75	51.825	Ciona_savignyi
ENSFALG00000011231	-	88	85.841	ENSCANG00000020991	FRG1	86	85.650	Colobus_angolensis_palliatus
ENSFALG00000011231	-	88	86.726	ENSCGRG00001014998	Frg1	86	86.547	Cricetulus_griseus_chok1gshd
ENSFALG00000011231	-	88	86.726	ENSCGRG00000011860	-	86	86.547	Cricetulus_griseus_crigri
ENSFALG00000011231	-	88	68.889	ENSCGRG00000003902	-	81	68.610	Cricetulus_griseus_crigri
ENSFALG00000011231	-	80	69.268	ENSCSEG00000015950	frg1	84	69.268	Cynoglossus_semilaevis
ENSFALG00000011231	-	91	70.563	ENSCVAG00000009985	frg1	87	73.832	Cyprinodon_variegatus
ENSFALG00000011231	-	86	74.429	ENSDARG00000056504	frg1	93	78.358	Danio_rerio
ENSFALG00000011231	-	88	86.283	ENSDNOG00000014886	FRG1	85	87.671	Dasypus_novemcinctus
ENSFALG00000011231	-	85	76.712	ENSDORG00000016190	Frg1	85	75.785	Dipodomys_ordii
ENSFALG00000011231	-	88	49.778	FBgn0036964	FRG1	81	50.935	Drosophila_melanogaster
ENSFALG00000011231	-	88	84.444	ENSETEG00000012349	-	86	84.305	Echinops_telfairi
ENSFALG00000011231	-	50	61.240	ENSEBUG00000014053	frg1	73	61.240	Eptatretus_burgeri
ENSFALG00000011231	-	58	52.703	ENSEBUG00000012359	FRG1	89	52.703	Eptatretus_burgeri
ENSFALG00000011231	-	88	85.841	ENSEASG00005017497	FRG1	87	86.099	Equus_asinus_asinus
ENSFALG00000011231	-	88	85.841	ENSECAG00000003122	FRG1	87	86.099	Equus_caballus
ENSFALG00000011231	-	62	87.261	ENSEEUG00000000145	-	100	87.261	Erinaceus_europaeus
ENSFALG00000011231	-	87	73.094	ENSELUG00000021712	frg1	87	73.423	Esox_lucius
ENSFALG00000011231	-	85	87.671	ENSFCAG00000025737	FRG1	86	86.547	Felis_catus
ENSFALG00000011231	-	88	86.283	ENSFDAG00000000962	-	87	86.099	Fukomys_damarensis
ENSFALG00000011231	-	85	77.169	ENSFDAG00000012697	-	82	83.240	Fukomys_damarensis
ENSFALG00000011231	-	86	71.233	ENSFHEG00000010540	frg1	86	71.233	Fundulus_heteroclitus
ENSFALG00000011231	-	85	70.370	ENSGMOG00000000867	frg1	86	69.863	Gadus_morhua
ENSFALG00000011231	-	88	95.556	ENSGALG00000013590	-	87	95.946	Gallus_gallus
ENSFALG00000011231	-	66	73.810	ENSGAFG00000013855	frg1	83	72.515	Gambusia_affinis
ENSFALG00000011231	-	87	71.622	ENSGACG00000016888	frg1	87	71.622	Gasterosteus_aculeatus
ENSFALG00000011231	-	96	87.755	ENSGAGG00000025012	-	95	87.755	Gopherus_agassizii
ENSFALG00000011231	-	69	76.404	ENSGGOG00000012888	-	90	76.404	Gorilla_gorilla
ENSFALG00000011231	-	88	54.018	ENSGGOG00000040796	-	67	66.460	Gorilla_gorilla
ENSFALG00000011231	-	87	73.874	ENSHBUG00000010667	frg1	88	73.832	Haplochromis_burtoni
ENSFALG00000011231	-	85	74.886	ENSHGLG00000001211	-	86	74.886	Heterocephalus_glaber_female
ENSFALG00000011231	-	85	82.569	ENSHGLG00000020943	-	86	81.532	Heterocephalus_glaber_female
ENSFALG00000011231	-	85	83.028	ENSHGLG00000020402	-	81	81.982	Heterocephalus_glaber_female
ENSFALG00000011231	-	85	87.215	ENSHGLG00000005601	FRG1	87	86.099	Heterocephalus_glaber_female
ENSFALG00000011231	-	85	75.342	ENSHGLG00100010674	-	86	75.342	Heterocephalus_glaber_male
ENSFALG00000011231	-	85	82.569	ENSHGLG00100021211	-	86	81.532	Heterocephalus_glaber_male
ENSFALG00000011231	-	85	71.689	ENSHGLG00100015285	-	91	71.689	Heterocephalus_glaber_male
ENSFALG00000011231	-	85	86.758	ENSHGLG00100016261	-	87	85.650	Heterocephalus_glaber_male
ENSFALG00000011231	-	87	71.749	ENSHCOG00000000224	frg1	95	71.749	Hippocampus_comes
ENSFALG00000011231	-	85	74.654	ENSIPUG00000022716	frg1	89	74.074	Ictalurus_punctatus
ENSFALG00000011231	-	88	86.283	ENSSTOG00000002857	-	86	86.547	Ictidomys_tridecemlineatus
ENSFALG00000011231	-	85	87.215	ENSJJAG00000020625	Frg1	86	86.099	Jaculus_jaculus
ENSFALG00000011231	-	87	71.556	ENSKMAG00000005841	frg1	88	71.556	Kryptolebias_marmoratus
ENSFALG00000011231	-	87	70.721	ENSLBEG00000001466	frg1	87	72.455	Labrus_bergylta
ENSFALG00000011231	-	88	71.053	ENSLACG00000010243	frg1	87	70.796	Latimeria_chalumnae
ENSFALG00000011231	-	87	77.130	ENSLOCG00000013868	frg1	87	77.027	Lepisosteus_oculatus
ENSFALG00000011231	-	85	87.215	ENSLAFG00000011191	FRG1	85	87.215	Loxodonta_africana
ENSFALG00000011231	-	88	85.841	ENSMFAG00000031178	FRG1	86	85.650	Macaca_fascicularis
ENSFALG00000011231	-	83	77.103	ENSMFAG00000042873	-	89	77.103	Macaca_fascicularis
ENSFALG00000011231	-	78	76.847	ENSMMUG00000047496	-	87	76.847	Macaca_mulatta
ENSFALG00000011231	-	88	85.841	ENSMMUG00000001824	FRG1	93	86.792	Macaca_mulatta
ENSFALG00000011231	-	84	79.535	ENSMNEG00000018620	FRG1	86	80.100	Macaca_nemestrina
ENSFALG00000011231	-	88	85.841	ENSMLEG00000028881	FRG1	86	85.650	Mandrillus_leucophaeus
ENSFALG00000011231	-	87	73.874	ENSMAMG00000012406	frg1	87	73.874	Mastacembelus_armatus
ENSFALG00000011231	-	87	73.423	ENSMZEG00005007549	frg1	88	73.364	Maylandia_zebra
ENSFALG00000011231	-	88	96.000	ENSMGAG00000011481	-	87	96.396	Meleagris_gallopavo
ENSFALG00000011231	-	88	86.726	ENSMAUG00000000847	Frg1	86	86.547	Mesocricetus_auratus
ENSFALG00000011231	-	88	86.726	ENSMICG00000046816	FRG1	86	86.547	Microcebus_murinus
ENSFALG00000011231	-	88	79.111	ENSMOCG00000023000	Frg1	85	79.730	Microtus_ochrogaster
ENSFALG00000011231	-	86	72.146	ENSMMOG00000004008	frg1	93	72.146	Mola_mola
ENSFALG00000011231	-	85	86.758	ENSMODG00000019031	-	76	85.650	Monodelphis_domestica
ENSFALG00000011231	-	87	72.973	ENSMALG00000018497	frg1	87	72.973	Monopterus_albus
ENSFALG00000011231	-	88	86.283	MGP_CAROLIEiJ_G0031006	Frg1	86	86.099	Mus_caroli
ENSFALG00000011231	-	88	86.283	ENSMUSG00000031590	Frg1	86	86.099	Mus_musculus
ENSFALG00000011231	-	88	85.841	MGP_PahariEiJ_G0021475	Frg1	86	85.650	Mus_pahari
ENSFALG00000011231	-	88	85.841	MGP_SPRETEiJ_G0032120	Frg1	86	85.650	Mus_spretus
ENSFALG00000011231	-	85	87.671	ENSMPUG00000017962	FRG1	86	86.547	Mustela_putorius_furo
ENSFALG00000011231	-	87	86.161	ENSMLUG00000023179	FRG1	87	86.547	Myotis_lucifugus
ENSFALG00000011231	-	88	86.283	ENSNGAG00000016411	Frg1	86	86.099	Nannospalax_galili
ENSFALG00000011231	-	65	77.108	ENSNBRG00000006806	frg1	78	77.108	Neolamprologus_brichardi
ENSFALG00000011231	-	88	85.398	ENSNLEG00000000930	FRG1	87	85.202	Nomascus_leucogenys
ENSFALG00000011231	-	78	76.617	ENSNLEG00000028874	-	91	76.617	Nomascus_leucogenys
ENSFALG00000011231	-	85	71.493	ENSNLEG00000032333	-	85	71.493	Nomascus_leucogenys
ENSFALG00000011231	-	87	62.780	ENSNLEG00000032846	-	100	77.679	Nomascus_leucogenys
ENSFALG00000011231	-	87	73.568	ENSNLEG00000035849	-	86	73.568	Nomascus_leucogenys
ENSFALG00000011231	-	78	77.114	ENSNLEG00000036059	-	86	77.114	Nomascus_leucogenys
ENSFALG00000011231	-	60	83.553	ENSMEUG00000007509	-	59	83.553	Notamacropus_eugenii
ENSFALG00000011231	-	88	73.009	ENSOPRG00000004722	-	87	72.646	Ochotona_princeps
ENSFALG00000011231	-	86	69.231	ENSODEG00000006953	-	96	69.231	Octodon_degus
ENSFALG00000011231	-	85	87.215	ENSODEG00000006458	-	87	86.099	Octodon_degus
ENSFALG00000011231	-	87	73.543	ENSONIG00000010162	frg1	87	73.543	Oreochromis_niloticus
ENSFALG00000011231	-	67	84.211	ENSOANG00000005659	-	76	84.211	Ornithorhynchus_anatinus
ENSFALG00000011231	-	88	85.841	ENSOCUG00000009038	-	86	85.650	Oryctolagus_cuniculus
ENSFALG00000011231	-	83	70.616	ENSORLG00000008106	frg1	77	70.616	Oryzias_latipes
ENSFALG00000011231	-	87	71.171	ENSORLG00020014355	frg1	87	71.171	Oryzias_latipes_hni
ENSFALG00000011231	-	87	71.171	ENSORLG00015014159	frg1	87	71.171	Oryzias_latipes_hsok
ENSFALG00000011231	-	72	72.131	ENSOMEG00000002468	frg1	76	72.131	Oryzias_melastigma
ENSFALG00000011231	-	90	85.281	ENSOGAG00000005749	-	86	86.547	Otolemur_garnettii
ENSFALG00000011231	-	85	85.135	ENSOARG00000008592	FRG1	87	84.071	Ovis_aries
ENSFALG00000011231	-	71	86.339	ENSPPAG00000043170	-	94	84.158	Pan_paniscus
ENSFALG00000011231	-	87	62.931	ENSPPAG00000043174	-	84	63.801	Pan_paniscus
ENSFALG00000011231	-	85	85.388	ENSPPRG00000019777	-	87	84.305	Panthera_pardus
ENSFALG00000011231	-	85	87.215	ENSPPRG00000025003	-	86	86.099	Panthera_pardus
ENSFALG00000011231	-	85	87.671	ENSPTIG00000006588	-	86	86.547	Panthera_tigris_altaica
ENSFALG00000011231	-	85	85.845	ENSPTIG00000006566	-	87	84.753	Panthera_tigris_altaica
ENSFALG00000011231	-	81	71.154	ENSPTRG00000052363	-	94	79.208	Pan_troglodytes
ENSFALG00000011231	-	88	86.222	ENSPTRG00000016671	-	88	87.065	Pan_troglodytes
ENSFALG00000011231	-	81	72.381	ENSPTRG00000044710	-	89	72.381	Pan_troglodytes
ENSFALG00000011231	-	80	73.430	ENSPTRG00000043123	-	79	74.747	Pan_troglodytes
ENSFALG00000011231	-	81	70.952	ENSPTRG00000050204	-	88	70.952	Pan_troglodytes
ENSFALG00000011231	-	88	86.222	ENSPTRG00000050205	-	88	87.065	Pan_troglodytes
ENSFALG00000011231	-	58	79.054	ENSPANG00000031530	-	66	78.621	Papio_anubis
ENSFALG00000011231	-	87	71.171	ENSPKIG00000024189	frg1	87	71.171	Paramormyrops_kingsleyae
ENSFALG00000011231	-	84	86.977	ENSPSIG00000017971	-	82	86.977	Pelodiscus_sinensis
ENSFALG00000011231	-	82	73.206	ENSPMGG00000019273	frg1	87	73.206	Periophthalmus_magnuspinnatus
ENSFALG00000011231	-	88	86.667	ENSPEMG00000000650	Frg1	86	86.547	Peromyscus_maniculatus_bairdii
ENSFALG00000011231	-	88	84.000	ENSPCIG00000007530	-	59	85.845	Phascolarctos_cinereus
ENSFALG00000011231	-	85	73.148	ENSPFOG00000006721	frg1	86	72.146	Poecilia_formosa
ENSFALG00000011231	-	85	73.148	ENSPMEG00000013816	frg1	86	72.146	Poecilia_mexicana
ENSFALG00000011231	-	85	73.148	ENSPREG00000000097	frg1	86	72.146	Poecilia_reticulata
ENSFALG00000011231	-	56	88.276	ENSPPYG00000029810	-	100	88.276	Pongo_abelii
ENSFALG00000011231	-	62	80.380	ENSPPYG00000011275	-	87	80.380	Pongo_abelii
ENSFALG00000011231	-	84	82.407	ENSPCAG00000014953	-	86	82.464	Procavia_capensis
ENSFALG00000011231	-	64	69.512	ENSPCOG00000022726	FRG1	75	68.452	Propithecus_coquereli
ENSFALG00000011231	-	87	69.196	ENSPVAG00000010551	FRG1	86	69.507	Pteropus_vampyrus
ENSFALG00000011231	-	67	73.684	ENSPNYG00000015209	frg1	74	73.684	Pundamilia_nyererei
ENSFALG00000011231	-	84	75.587	ENSPNAG00000013259	frg1	88	75.587	Pygocentrus_nattereri
ENSFALG00000011231	-	88	85.841	ENSRNOG00000009846	Frg1	86	85.650	Rattus_norvegicus
ENSFALG00000011231	-	75	86.528	ENSRBIG00000042219	-	79	86.316	Rhinopithecus_bieti
ENSFALG00000011231	-	88	82.301	ENSRROG00000015523	FRG1	86	82.063	Rhinopithecus_roxellana
ENSFALG00000011231	-	82	80.569	ENSRROG00000032084	-	95	75.238	Rhinopithecus_roxellana
ENSFALG00000011231	-	85	87.215	ENSSBOG00000034175	FRG1	87	86.099	Saimiri_boliviensis_boliviensis
ENSFALG00000011231	-	85	86.758	ENSSHAG00000005886	-	85	86.758	Sarcophilus_harrisii
ENSFALG00000011231	-	87	74.439	ENSSFOG00015021361	frg1	86	73.364	Scleropages_formosus
ENSFALG00000011231	-	89	67.257	ENSSMAG00000001213	frg1	87	68.468	Scophthalmus_maximus
ENSFALG00000011231	-	87	71.622	ENSSDUG00000018886	frg1	87	71.622	Seriola_dumerili
ENSFALG00000011231	-	87	71.171	ENSSLDG00000024191	frg1	87	71.171	Seriola_lalandi_dorsalis
ENSFALG00000011231	-	66	88.235	ENSSARG00000002471	-	93	86.782	Sorex_araneus
ENSFALG00000011231	-	84	86.512	ENSSPUG00000017326	-	85	86.512	Sphenodon_punctatus
ENSFALG00000011231	-	84	73.832	ENSSPAG00000013294	frg1	86	73.832	Stegastes_partitus
ENSFALG00000011231	-	85	87.215	ENSSSCG00000006996	FRG1	86	86.099	Sus_scrofa
ENSFALG00000011231	-	93	98.729	ENSTGUG00000007028	-	92	98.729	Taeniopygia_guttata
ENSFALG00000011231	-	87	71.171	ENSTRUG00000016208	frg1	87	71.171	Takifugu_rubripes
ENSFALG00000011231	-	88	71.875	ENSTNIG00000007128	frg1	85	73.148	Tetraodon_nigroviridis
ENSFALG00000011231	-	88	84.956	ENSTBEG00000014491	-	86	84.753	Tupaia_belangeri
ENSFALG00000011231	-	83	60.664	ENSTBEG00000012789	-	99	60.664	Tupaia_belangeri
ENSFALG00000011231	-	78	54.040	ENSTBEG00000017605	-	99	54.040	Tupaia_belangeri
ENSFALG00000011231	-	85	87.671	ENSTTRG00000003429	FRG1	85	87.671	Tursiops_truncatus
ENSFALG00000011231	-	80	86.341	ENSUAMG00000012123	-	86	86.341	Ursus_americanus
ENSFALG00000011231	-	85	87.671	ENSUMAG00000021119	FRG1	86	86.547	Ursus_maritimus
ENSFALG00000011231	-	88	86.222	ENSVPAG00000011977	-	94	86.547	Vicugna_pacos
ENSFALG00000011231	-	88	83.628	ENSVPAG00000000616	FRG1	86	83.857	Vicugna_pacos
ENSFALG00000011231	-	83	87.736	ENSVVUG00000007181	-	77	87.736	Vulpes_vulpes
ENSFALG00000011231	-	88	78.667	ENSXETG00000012470	frg1	86	79.452	Xenopus_tropicalis
ENSFALG00000011231	-	84	72.300	ENSXCOG00000005312	frg1	85	72.300	Xiphophorus_couchianus
ENSFALG00000011231	-	85	72.685	ENSXMAG00000007751	frg1	86	71.689	Xiphophorus_maculatus