EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000011463 (Gene tree)
Gene ID: -
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 1700 bases
Position: chrJH603317.1:819925-821624
Accession: 20422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000011961	RNA_pol_L_2	PF13656.6	6.4e-29	1	1
ENSFALP00000011961	RNA_pol_L	PF01193.24	5.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000012010	POLR1D-201	303	-	ENSFALP00000011961	101 (aa)	-	U3KAA7

Gene Model

Click here to download ENSFALG00000011463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000011463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000011463	POLR1D	90	31.868	ENSFALG00000009523	POLR2J	78	31.868

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000011463	POLR1D	95	76.042	ENSG00000186184	POLR1D	83	76.042	Homo_sapiens
ENSFALG00000011463	POLR1D	90	76.923	ENSAPOG00000021882	polr1d	84	78.652	Acanthochromis_polyacanthus
ENSFALG00000011463	POLR1D	95	78.125	ENSAMEG00000019095	POLR1D	77	78.125	Ailuropoda_melanoleuca
ENSFALG00000011463	POLR1D	99	73.267	ENSACIG00000013328	polr1d	88	73.267	Amphilophus_citrinellus
ENSFALG00000011463	POLR1D	99	74.000	ENSAOCG00000018500	polr1d	88	74.000	Amphiprion_ocellaris
ENSFALG00000011463	POLR1D	99	73.000	ENSAPEG00000009489	polr1d	88	73.000	Amphiprion_percula
ENSFALG00000011463	POLR1D	99	72.000	ENSATEG00000019322	polr1d	88	72.000	Anabas_testudineus
ENSFALG00000011463	POLR1D	53	94.444	ENSAPLG00000012757	POLR1D	100	94.444	Anas_platyrhynchos
ENSFALG00000011463	POLR1D	99	68.000	ENSACAG00000015753	POLR1D	86	68.000	Anolis_carolinensis
ENSFALG00000011463	POLR1D	95	77.083	ENSANAG00000024486	POLR1D	72	77.083	Aotus_nancymaae
ENSFALG00000011463	POLR1D	99	74.000	ENSACLG00000023805	polr1d	90	74.000	Astatotilapia_calliptera
ENSFALG00000011463	POLR1D	99	75.000	ENSAMXG00000036118	polr1d	87	75.000	Astyanax_mexicanus
ENSFALG00000011463	POLR1D	95	78.125	ENSBTAG00000008642	POLR1D	72	78.125	Bos_taurus
ENSFALG00000011463	POLR1D	95	78.125	ENSBTAG00000033252	-	72	78.125	Bos_taurus
ENSFALG00000011463	POLR1D	87	32.955	WBGene00010230	rpac-19	61	32.955	Caenorhabditis_elegans
ENSFALG00000011463	POLR1D	95	77.083	ENSCJAG00000044669	POLR1D	72	77.083	Callithrix_jacchus
ENSFALG00000011463	POLR1D	95	78.125	ENSCAFG00000006755	POLR1D	72	78.125	Canis_familiaris
ENSFALG00000011463	POLR1D	95	77.083	ENSCHIG00000021910	POLR1D	72	77.083	Capra_hircus
ENSFALG00000011463	POLR1D	95	77.083	ENSTSYG00000026817	-	72	77.083	Carlito_syrichta
ENSFALG00000011463	POLR1D	95	65.306	ENSTSYG00000034852	-	81	65.306	Carlito_syrichta
ENSFALG00000011463	POLR1D	64	64.615	ENSCAPG00000006058	-	66	64.615	Cavia_aperea
ENSFALG00000011463	POLR1D	65	65.152	ENSCPOG00000030450	-	67	65.152	Cavia_porcellus
ENSFALG00000011463	POLR1D	95	77.083	ENSCCAG00000021349	-	72	77.083	Cebus_capucinus
ENSFALG00000011463	POLR1D	82	63.855	ENSCCAG00000020191	-	70	63.855	Cebus_capucinus
ENSFALG00000011463	POLR1D	95	76.042	ENSCATG00000030710	-	72	76.042	Cercocebus_atys
ENSFALG00000011463	POLR1D	95	64.583	ENSCATG00000022900	-	71	64.583	Cercocebus_atys
ENSFALG00000011463	POLR1D	95	76.042	ENSCLAG00000017623	POLR1D	77	76.042	Chinchilla_lanigera
ENSFALG00000011463	POLR1D	85	80.233	ENSCPBG00000004719	POLR1D	85	80.233	Chrysemys_picta_bellii
ENSFALG00000011463	POLR1D	95	73.958	ENSCANG00000037694	-	72	73.958	Colobus_angolensis_palliatus
ENSFALG00000011463	POLR1D	95	76.042	ENSCANG00000028632	-	72	76.042	Colobus_angolensis_palliatus
ENSFALG00000011463	POLR1D	95	77.083	ENSCGRG00001021251	Polr1d	72	77.083	Cricetulus_griseus_chok1gshd
ENSFALG00000011463	POLR1D	95	77.083	ENSCGRG00000011639	Polr1d	72	77.083	Cricetulus_griseus_crigri
ENSFALG00000011463	POLR1D	92	74.194	ENSCSEG00000018268	polr1d	85	71.717	Cynoglossus_semilaevis
ENSFALG00000011463	POLR1D	99	75.000	ENSCVAG00000018527	polr1d	88	75.000	Cyprinodon_variegatus
ENSFALG00000011463	POLR1D	96	71.134	ENSDARG00000037570	polr1d	87	71.134	Danio_rerio
ENSFALG00000011463	POLR1D	95	73.958	ENSDNOG00000046247	-	72	73.958	Dasypus_novemcinctus
ENSFALG00000011463	POLR1D	95	75.000	ENSDNOG00000043676	-	72	75.000	Dasypus_novemcinctus
ENSFALG00000011463	POLR1D	95	77.083	ENSDORG00000029155	Polr1d	72	77.083	Dipodomys_ordii
ENSFALG00000011463	POLR1D	86	49.425	FBgn0086447	l(2)37Cg	82	49.425	Drosophila_melanogaster
ENSFALG00000011463	POLR1D	95	72.917	ENSETEG00000012797	POLR1D	77	72.917	Echinops_telfairi
ENSFALG00000011463	POLR1D	86	68.966	ENSEBUG00000011748	polr1d	61	68.966	Eptatretus_burgeri
ENSFALG00000011463	POLR1D	95	77.083	ENSEASG00005022487	POLR1D	74	77.083	Equus_asinus_asinus
ENSFALG00000011463	POLR1D	94	77.895	ENSEEUG00000013144	POLR1D	77	77.895	Erinaceus_europaeus
ENSFALG00000011463	POLR1D	97	78.571	ENSELUG00000005105	rpac2	86	78.571	Esox_lucius
ENSFALG00000011463	POLR1D	95	77.083	ENSFCAG00000030162	POLR1D	72	77.083	Felis_catus
ENSFALG00000011463	POLR1D	95	73.958	ENSFDAG00000004463	POLR1D	72	73.958	Fukomys_damarensis
ENSFALG00000011463	POLR1D	99	73.000	ENSFHEG00000015410	polr1d	87	73.000	Fundulus_heteroclitus
ENSFALG00000011463	POLR1D	67	86.765	ENSGALG00000007470	POLR1D	67	86.765	Gallus_gallus
ENSFALG00000011463	POLR1D	100	74.257	ENSGAFG00000001693	polr1d	88	75.000	Gambusia_affinis
ENSFALG00000011463	POLR1D	95	73.958	ENSGACG00000018585	polr1d	81	73.958	Gasterosteus_aculeatus
ENSFALG00000011463	POLR1D	99	79.000	ENSGAGG00000008503	POLR1D	88	79.000	Gopherus_agassizii
ENSFALG00000011463	POLR1D	95	76.042	ENSGGOG00000004235	POLR1D	72	76.042	Gorilla_gorilla
ENSFALG00000011463	POLR1D	99	74.000	ENSHBUG00000002111	polr1d	88	74.000	Haplochromis_burtoni
ENSFALG00000011463	POLR1D	95	75.000	ENSHGLG00000003202	POLR1D	72	75.000	Heterocephalus_glaber_female
ENSFALG00000011463	POLR1D	95	75.000	ENSHGLG00100009393	POLR1D	72	75.000	Heterocephalus_glaber_male
ENSFALG00000011463	POLR1D	99	70.000	ENSHCOG00000003258	polr1d	88	70.000	Hippocampus_comes
ENSFALG00000011463	POLR1D	99	75.000	ENSIPUG00000014810	polr1d	87	75.000	Ictalurus_punctatus
ENSFALG00000011463	POLR1D	95	77.083	ENSSTOG00000013877	POLR1D	72	77.083	Ictidomys_tridecemlineatus
ENSFALG00000011463	POLR1D	95	75.000	ENSJJAG00000022671	-	80	75.000	Jaculus_jaculus
ENSFALG00000011463	POLR1D	95	56.250	ENSJJAG00000021667	-	56	56.250	Jaculus_jaculus
ENSFALG00000011463	POLR1D	99	75.000	ENSKMAG00000015256	polr1d	88	75.000	Kryptolebias_marmoratus
ENSFALG00000011463	POLR1D	99	74.000	ENSLBEG00000015919	polr1d	88	74.000	Labrus_bergylta
ENSFALG00000011463	POLR1D	98	72.727	ENSLACG00000006810	POLR1D	83	72.727	Latimeria_chalumnae
ENSFALG00000011463	POLR1D	58	86.441	ENSLOCG00000014976	polr1d	80	86.441	Lepisosteus_oculatus
ENSFALG00000011463	POLR1D	95	75.000	ENSLAFG00000032290	POLR1D	72	75.000	Loxodonta_africana
ENSFALG00000011463	POLR1D	95	76.042	ENSMFAG00000045264	POLR1D	74	76.042	Macaca_fascicularis
ENSFALG00000011463	POLR1D	80	70.370	ENSMMUG00000041570	-	73	70.370	Macaca_mulatta
ENSFALG00000011463	POLR1D	95	76.042	ENSMMUG00000020386	POLR1D	83	76.042	Macaca_mulatta
ENSFALG00000011463	POLR1D	95	76.042	ENSMNEG00000008630	-	72	76.042	Macaca_nemestrina
ENSFALG00000011463	POLR1D	93	63.830	ENSMNEG00000038120	-	73	63.830	Macaca_nemestrina
ENSFALG00000011463	POLR1D	95	64.583	ENSMLEG00000032251	-	71	64.583	Mandrillus_leucophaeus
ENSFALG00000011463	POLR1D	95	76.042	ENSMLEG00000041048	-	72	76.042	Mandrillus_leucophaeus
ENSFALG00000011463	POLR1D	89	78.889	ENSMAMG00000014834	polr1d	84	78.889	Mastacembelus_armatus
ENSFALG00000011463	POLR1D	88	80.899	ENSMZEG00005006638	polr1d	79	80.899	Maylandia_zebra
ENSFALG00000011463	POLR1D	86	95.402	ENSMGAG00000005322	POLR1D	80	95.402	Meleagris_gallopavo
ENSFALG00000011463	POLR1D	95	77.083	ENSMAUG00000001946	Polr1d	72	77.083	Mesocricetus_auratus
ENSFALG00000011463	POLR1D	95	59.375	ENSMICG00000007349	-	71	59.375	Microcebus_murinus
ENSFALG00000011463	POLR1D	95	76.042	ENSMICG00000016883	-	72	76.042	Microcebus_murinus
ENSFALG00000011463	POLR1D	95	76.042	ENSMOCG00000021288	Polr1d	72	76.042	Microtus_ochrogaster
ENSFALG00000011463	POLR1D	99	76.000	ENSMMOG00000009605	polr1d	88	76.000	Mola_mola
ENSFALG00000011463	POLR1D	99	80.000	ENSMODG00000023881	POLR1D	88	80.000	Monodelphis_domestica
ENSFALG00000011463	POLR1D	99	71.000	ENSMALG00000010652	polr1d	88	71.000	Monopterus_albus
ENSFALG00000011463	POLR1D	95	75.000	MGP_CAROLIEiJ_G0028034	Polr1d	72	75.000	Mus_caroli
ENSFALG00000011463	POLR1D	95	75.000	ENSMUSG00000029642	Polr1d	72	75.000	Mus_musculus
ENSFALG00000011463	POLR1D	95	75.000	MGP_PahariEiJ_G0024600	Polr1d	72	75.000	Mus_pahari
ENSFALG00000011463	POLR1D	95	73.958	MGP_SPRETEiJ_G0029032	Polr1d	72	73.958	Mus_spretus
ENSFALG00000011463	POLR1D	95	73.958	ENSMLUG00000004118	-	72	73.958	Myotis_lucifugus
ENSFALG00000011463	POLR1D	95	78.125	ENSMLUG00000027169	-	72	78.125	Myotis_lucifugus
ENSFALG00000011463	POLR1D	96	78.351	ENSNGAG00000006014	Polr1d	84	78.351	Nannospalax_galili
ENSFALG00000011463	POLR1D	99	74.000	ENSNBRG00000020327	polr1d	88	74.000	Neolamprologus_brichardi
ENSFALG00000011463	POLR1D	95	76.042	ENSNLEG00000000358	POLR1D	72	76.042	Nomascus_leucogenys
ENSFALG00000011463	POLR1D	81	67.073	ENSODEG00000014801	-	69	67.073	Octodon_degus
ENSFALG00000011463	POLR1D	94	75.789	ENSODEG00000005294	-	71	75.789	Octodon_degus
ENSFALG00000011463	POLR1D	100	82.178	ENSOANG00000008708	-	89	82.178	Ornithorhynchus_anatinus
ENSFALG00000011463	POLR1D	95	77.083	ENSOCUG00000015706	POLR1D	59	77.083	Oryctolagus_cuniculus
ENSFALG00000011463	POLR1D	99	74.000	ENSORLG00000010257	polr1d	88	74.000	Oryzias_latipes
ENSFALG00000011463	POLR1D	99	74.000	ENSORLG00020000533	polr1d	68	74.000	Oryzias_latipes_hni
ENSFALG00000011463	POLR1D	99	74.000	ENSORLG00015013267	polr1d	66	74.000	Oryzias_latipes_hsok
ENSFALG00000011463	POLR1D	99	74.000	ENSOMEG00000014912	polr1d	67	74.000	Oryzias_melastigma
ENSFALG00000011463	POLR1D	95	78.125	ENSOGAG00000014601	POLR1D	72	78.125	Otolemur_garnettii
ENSFALG00000011463	POLR1D	95	77.083	ENSOARG00000017005	POLR1D	74	77.083	Ovis_aries
ENSFALG00000011463	POLR1D	95	76.042	ENSPPAG00000028138	POLR1D	72	76.042	Pan_paniscus
ENSFALG00000011463	POLR1D	95	77.083	ENSPPRG00000003381	POLR1D	72	77.083	Panthera_pardus
ENSFALG00000011463	POLR1D	95	77.083	ENSPTIG00000018137	POLR1D	72	77.083	Panthera_tigris_altaica
ENSFALG00000011463	POLR1D	95	76.042	ENSPTRG00000005734	POLR1D	72	76.042	Pan_troglodytes
ENSFALG00000011463	POLR1D	95	63.542	ENSPANG00000035051	-	71	63.542	Papio_anubis
ENSFALG00000011463	POLR1D	95	76.042	ENSPANG00000020259	-	72	76.042	Papio_anubis
ENSFALG00000011463	POLR1D	97	77.551	ENSPKIG00000021891	polr1d	87	57.798	Paramormyrops_kingsleyae
ENSFALG00000011463	POLR1D	99	79.000	ENSPSIG00000011822	POLR1D	78	79.000	Pelodiscus_sinensis
ENSFALG00000011463	POLR1D	92	63.441	ENSPMGG00000012998	POLR1D	67	63.441	Periophthalmus_magnuspinnatus
ENSFALG00000011463	POLR1D	92	73.118	ENSPMGG00000010359	polr1d	81	73.118	Periophthalmus_magnuspinnatus
ENSFALG00000011463	POLR1D	95	76.042	ENSPEMG00000006336	-	74	76.042	Peromyscus_maniculatus_bairdii
ENSFALG00000011463	POLR1D	97	63.265	ENSPMAG00000004228	polr1d	82	63.265	Petromyzon_marinus
ENSFALG00000011463	POLR1D	99	79.000	ENSPCIG00000001673	POLR1D	88	79.000	Phascolarctos_cinereus
ENSFALG00000011463	POLR1D	99	75.000	ENSPFOG00000023343	polr1d	99	74.419	Poecilia_formosa
ENSFALG00000011463	POLR1D	99	75.000	ENSPLAG00000009675	polr1d	88	75.000	Poecilia_latipinna
ENSFALG00000011463	POLR1D	99	75.000	ENSPMEG00000004628	polr1d	88	75.000	Poecilia_mexicana
ENSFALG00000011463	POLR1D	99	75.000	ENSPREG00000022032	polr1d	88	75.000	Poecilia_reticulata
ENSFALG00000011463	POLR1D	95	73.958	ENSPCOG00000028175	POLR1D	72	73.958	Propithecus_coquereli
ENSFALG00000011463	POLR1D	99	74.000	ENSPNYG00000000107	polr1d	88	74.000	Pundamilia_nyererei
ENSFALG00000011463	POLR1D	99	74.000	ENSPNAG00000001512	polr1d	84	74.000	Pygocentrus_nattereri
ENSFALG00000011463	POLR1D	95	72.917	ENSRBIG00000000336	-	72	72.917	Rhinopithecus_bieti
ENSFALG00000011463	POLR1D	95	76.042	ENSRBIG00000036378	-	72	76.042	Rhinopithecus_bieti
ENSFALG00000011463	POLR1D	95	76.042	ENSRROG00000042232	-	72	76.042	Rhinopithecus_roxellana
ENSFALG00000011463	POLR1D	95	73.958	ENSRROG00000026751	-	72	73.958	Rhinopithecus_roxellana
ENSFALG00000011463	POLR1D	89	53.333	YNL113W	RPC19	63	53.333	Saccharomyces_cerevisiae
ENSFALG00000011463	POLR1D	95	77.083	ENSSBOG00000028482	-	72	77.083	Saimiri_boliviensis_boliviensis
ENSFALG00000011463	POLR1D	99	68.000	ENSSBOG00000030146	-	68	68.000	Saimiri_boliviensis_boliviensis
ENSFALG00000011463	POLR1D	97	78.571	ENSSHAG00000001190	POLR1D	76	78.571	Sarcophilus_harrisii
ENSFALG00000011463	POLR1D	91	85.870	ENSSFOG00015011375	polr1d	81	85.870	Scleropages_formosus
ENSFALG00000011463	POLR1D	99	72.000	ENSSMAG00000011861	polr1d	88	72.000	Scophthalmus_maximus
ENSFALG00000011463	POLR1D	99	72.000	ENSSDUG00000011930	polr1d	88	72.000	Seriola_dumerili
ENSFALG00000011463	POLR1D	88	77.528	ENSSLDG00000023871	polr1d	75	77.528	Seriola_lalandi_dorsalis
ENSFALG00000011463	POLR1D	95	77.083	ENSSARG00000007840	POLR1D	72	77.083	Sorex_araneus
ENSFALG00000011463	POLR1D	99	75.000	ENSSPUG00000005786	POLR1D	85	75.000	Sphenodon_punctatus
ENSFALG00000011463	POLR1D	99	73.000	ENSSPAG00000011764	polr1d	88	73.000	Stegastes_partitus
ENSFALG00000011463	POLR1D	95	75.000	ENSSSCG00000009310	POLR1D	72	75.000	Sus_scrofa
ENSFALG00000011463	POLR1D	95	96.875	ENSTGUG00000005450	POLR1D	100	96.875	Taeniopygia_guttata
ENSFALG00000011463	POLR1D	99	73.000	ENSTRUG00000019741	polr1d	88	73.000	Takifugu_rubripes
ENSFALG00000011463	POLR1D	95	76.042	ENSTBEG00000007006	POLR1D	77	76.042	Tupaia_belangeri
ENSFALG00000011463	POLR1D	95	78.125	ENSUAMG00000011413	POLR1D	72	78.125	Ursus_americanus
ENSFALG00000011463	POLR1D	95	78.125	ENSUMAG00000016968	POLR1D	75	78.125	Ursus_maritimus
ENSFALG00000011463	POLR1D	95	78.125	ENSVVUG00000009216	POLR1D	72	78.125	Vulpes_vulpes
ENSFALG00000011463	POLR1D	85	82.558	ENSXCOG00000011731	polr1d	66	82.558	Xiphophorus_couchianus
ENSFALG00000011463	POLR1D	85	82.558	ENSXMAG00000017538	polr1d	66	82.558	Xiphophorus_maculatus