EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000011496 (Gene tree)
Gene ID: -
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 13167 bases
Position: chrJH603221.1:2662223-2675389
Accession: 2890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000012025	TruB_N	PF01509.18	2.1e-20	1	1
ENSFALP00000012025	PUA	PF01472.20	6.4e-18	1	1
ENSFALP00000012025	DKCLD	PF08068.12	3.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000012074	DKC1-201	5311	-	ENSFALP00000012025	524 (aa)	-	U3KAH1

Gene Model

Click here to download ENSFALG00000011496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000011496's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000011496	DKC1	95	79.800	ENSG00000130826	DKC1	99	89.806	Homo_sapiens
ENSFALG00000011496	DKC1	92	78.794	ENSAPOG00000007799	dkc1	83	82.759	Acanthochromis_polyacanthus
ENSFALG00000011496	DKC1	84	84.234	ENSAMEG00000002776	DKC1	86	84.234	Ailuropoda_melanoleuca
ENSFALG00000011496	DKC1	85	81.306	ENSACIG00000022614	dkc1	90	82.151	Amphilophus_citrinellus
ENSFALG00000011496	DKC1	93	78.395	ENSAOCG00000013159	dkc1	91	80.132	Amphiprion_ocellaris
ENSFALG00000011496	DKC1	90	79.957	ENSAPEG00000002284	dkc1	91	80.132	Amphiprion_percula
ENSFALG00000011496	DKC1	86	78.384	ENSATEG00000013682	dkc1	84	80.135	Anabas_testudineus
ENSFALG00000011496	DKC1	96	79.249	ENSACAG00000015600	DKC1	75	84.545	Anolis_carolinensis
ENSFALG00000011496	DKC1	91	82.255	ENSANAG00000022732	DKC1	85	84.199	Aotus_nancymaae
ENSFALG00000011496	DKC1	81	83.529	ENSACLG00000015605	dkc1	85	83.529	Astatotilapia_calliptera
ENSFALG00000011496	DKC1	85	82.063	ENSAMXG00000017108	dkc1	79	86.881	Astyanax_mexicanus
ENSFALG00000011496	DKC1	85	82.774	ENSBTAG00000013045	DKC1	86	83.673	Bos_taurus
ENSFALG00000011496	DKC1	78	66.015	WBGene00010478	K01G5.5	97	62.187	Caenorhabditis_elegans
ENSFALG00000011496	DKC1	95	80.000	ENSCJAG00000004210	DKC1	85	83.521	Callithrix_jacchus
ENSFALG00000011496	DKC1	83	82.000	ENSCAFG00000019620	-	86	82.000	Canis_familiaris
ENSFALG00000011496	DKC1	82	74.545	ENSCAFG00000009311	-	86	74.376	Canis_familiaris
ENSFALG00000011496	DKC1	82	74.312	ENSCAFG00020009379	-	82	74.142	Canis_lupus_dingo
ENSFALG00000011496	DKC1	83	82.000	ENSCAFG00020008918	-	86	82.000	Canis_lupus_dingo
ENSFALG00000011496	DKC1	85	82.550	ENSCHIG00000017392	DKC1	86	83.447	Capra_hircus
ENSFALG00000011496	DKC1	89	79.626	ENSTSYG00000007681	DKC1	85	82.340	Carlito_syrichta
ENSFALG00000011496	DKC1	79	82.536	ENSCAPG00000003342	DKC1	91	83.538	Cavia_aperea
ENSFALG00000011496	DKC1	85	83.149	ENSCPOG00000008825	DKC1	85	83.973	Cavia_porcellus
ENSFALG00000011496	DKC1	85	74.058	ENSCCAG00000027418	DKC1	84	74.492	Cebus_capucinus
ENSFALG00000011496	DKC1	95	79.800	ENSCATG00000033602	DKC1	85	83.521	Cercocebus_atys
ENSFALG00000011496	DKC1	85	83.370	ENSCLAG00000000720	DKC1	86	84.199	Chinchilla_lanigera
ENSFALG00000011496	DKC1	95	79.800	ENSCSAG00000006706	DKC1	85	83.521	Chlorocebus_sabaeus
ENSFALG00000011496	DKC1	93	84.221	ENSCPBG00000005858	DKC1	89	88.863	Chrysemys_picta_bellii
ENSFALG00000011496	DKC1	76	79.093	ENSCING00000004599	-	76	78.554	Ciona_intestinalis
ENSFALG00000011496	DKC1	80	75.592	ENSCSAVG00000010047	-	96	74.483	Ciona_savignyi
ENSFALG00000011496	DKC1	95	79.800	ENSCANG00000027987	DKC1	85	83.521	Colobus_angolensis_palliatus
ENSFALG00000011496	DKC1	73	67.532	ENSCGRG00001016789	-	79	68.533	Cricetulus_griseus_chok1gshd
ENSFALG00000011496	DKC1	92	79.466	ENSCGRG00001014574	-	85	83.070	Cricetulus_griseus_chok1gshd
ENSFALG00000011496	DKC1	73	67.532	ENSCGRG00000014809	-	77	68.533	Cricetulus_griseus_crigri
ENSFALG00000011496	DKC1	92	79.466	ENSCGRG00000016075	-	85	83.070	Cricetulus_griseus_crigri
ENSFALG00000011496	DKC1	92	76.971	ENSCSEG00000012633	dkc1	94	79.778	Cynoglossus_semilaevis
ENSFALG00000011496	DKC1	85	80.537	ENSCVAG00000010155	dkc1	82	82.299	Cyprinodon_variegatus
ENSFALG00000011496	DKC1	82	83.295	ENSDARG00000016484	dkc1	84	82.540	Danio_rerio
ENSFALG00000011496	DKC1	85	84.035	ENSDNOG00000004218	DKC1	85	85.102	Dasypus_novemcinctus
ENSFALG00000011496	DKC1	54	74.386	ENSDORG00000013566	-	92	74.386	Dipodomys_ordii
ENSFALG00000011496	DKC1	85	68.080	FBgn0259937	Nop60B	89	65.550	Drosophila_melanogaster
ENSFALG00000011496	DKC1	85	80.488	ENSETEG00000016095	DKC1	81	87.160	Echinops_telfairi
ENSFALG00000011496	DKC1	66	77.101	ENSEBUG00000015962	dkc1	99	80.268	Eptatretus_burgeri
ENSFALG00000011496	DKC1	85	81.838	ENSEASG00005007484	DKC1	86	81.319	Equus_asinus_asinus
ENSFALG00000011496	DKC1	85	81.838	ENSECAG00000023524	DKC1	86	81.319	Equus_caballus
ENSFALG00000011496	DKC1	82	83.565	ENSEEUG00000003323	DKC1	100	84.028	Erinaceus_europaeus
ENSFALG00000011496	DKC1	90	80.171	ENSELUG00000014538	dkc1	93	80.514	Esox_lucius
ENSFALG00000011496	DKC1	83	83.409	ENSFCAG00000006577	DKC1	86	83.409	Felis_catus
ENSFALG00000011496	DKC1	85	82.628	ENSFDAG00000002516	DKC1	86	83.333	Fukomys_damarensis
ENSFALG00000011496	DKC1	85	82.022	ENSFHEG00000004627	dkc1	85	82.045	Fundulus_heteroclitus
ENSFALG00000011496	DKC1	76	84.383	ENSGMOG00000017277	dkc1	100	84.383	Gadus_morhua
ENSFALG00000011496	DKC1	94	91.278	ENSGALG00000005054	DKC1	86	93.126	Gallus_gallus
ENSFALG00000011496	DKC1	85	80.846	ENSGAFG00000011486	dkc1	73	81.922	Gambusia_affinis
ENSFALG00000011496	DKC1	77	85.644	ENSGACG00000004373	dkc1	96	87.761	Gasterosteus_aculeatus
ENSFALG00000011496	DKC1	93	84.836	ENSGAGG00000011330	DKC1	84	88.409	Gopherus_agassizii
ENSFALG00000011496	DKC1	95	79.800	ENSGGOG00000001045	DKC1	85	83.521	Gorilla_gorilla
ENSFALG00000011496	DKC1	85	81.696	ENSHBUG00000012436	dkc1	85	82.005	Haplochromis_burtoni
ENSFALG00000011496	DKC1	91	82.046	ENSHGLG00000000649	DKC1	84	84.127	Heterocephalus_glaber_female
ENSFALG00000011496	DKC1	91	82.046	ENSHGLG00100001153	DKC1	85	84.127	Heterocephalus_glaber_male
ENSFALG00000011496	DKC1	92	77.131	ENSHCOG00000021099	dkc1	84	83.333	Hippocampus_comes
ENSFALG00000011496	DKC1	85	82.511	ENSIPUG00000010309	dkc1	84	82.727	Ictalurus_punctatus
ENSFALG00000011496	DKC1	85	82.080	ENSSTOG00000001074	-	90	82.883	Ictidomys_tridecemlineatus
ENSFALG00000011496	DKC1	85	75.615	ENSSTOG00000020149	-	85	76.244	Ictidomys_tridecemlineatus
ENSFALG00000011496	DKC1	92	69.796	ENSSTOG00000011904	-	81	72.360	Ictidomys_tridecemlineatus
ENSFALG00000011496	DKC1	54	75.265	ENSJJAG00000010086	-	92	75.265	Jaculus_jaculus
ENSFALG00000011496	DKC1	85	78.829	ENSKMAG00000008010	dkc1	85	79.634	Kryptolebias_marmoratus
ENSFALG00000011496	DKC1	92	77.593	ENSLBEG00000019122	dkc1	87	81.093	Labrus_bergylta
ENSFALG00000011496	DKC1	88	81.917	ENSLACG00000014025	DKC1	95	85.681	Latimeria_chalumnae
ENSFALG00000011496	DKC1	88	80.645	ENSLOCG00000013713	dkc1	87	84.149	Lepisosteus_oculatus
ENSFALG00000011496	DKC1	85	82.927	ENSLAFG00000000221	DKC1	85	83.710	Loxodonta_africana
ENSFALG00000011496	DKC1	95	79.600	ENSMFAG00000032398	DKC1	73	83.296	Macaca_fascicularis
ENSFALG00000011496	DKC1	95	79.800	ENSMMUG00000005768	DKC1	85	83.521	Macaca_mulatta
ENSFALG00000011496	DKC1	95	79.800	ENSMNEG00000034503	DKC1	85	83.521	Macaca_nemestrina
ENSFALG00000011496	DKC1	95	79.800	ENSMLEG00000034422	DKC1	85	83.521	Mandrillus_leucophaeus
ENSFALG00000011496	DKC1	79	85.783	ENSMAMG00000005427	dkc1	90	86.829	Mastacembelus_armatus
ENSFALG00000011496	DKC1	85	81.920	ENSMZEG00005014503	dkc1	85	82.232	Maylandia_zebra
ENSFALG00000011496	DKC1	89	89.722	ENSMGAG00000009238	DKC1	86	93.797	Meleagris_gallopavo
ENSFALG00000011496	DKC1	54	74.386	ENSMAUG00000016454	-	92	74.386	Mesocricetus_auratus
ENSFALG00000011496	DKC1	85	72.124	ENSMICG00000002818	-	99	76.280	Microcebus_murinus
ENSFALG00000011496	DKC1	92	77.867	ENSMICG00000038751	-	86	82.688	Microcebus_murinus
ENSFALG00000011496	DKC1	54	71.930	ENSMOCG00000001169	-	92	71.930	Microtus_ochrogaster
ENSFALG00000011496	DKC1	79	85.337	ENSMMOG00000020348	dkc1	89	85.337	Mola_mola
ENSFALG00000011496	DKC1	83	82.380	ENSMODG00000009243	DKC1	78	80.795	Monodelphis_domestica
ENSFALG00000011496	DKC1	84	80.090	ENSMALG00000009454	dkc1	86	78.936	Monopterus_albus
ENSFALG00000011496	DKC1	85	72.527	MGP_CAROLIEiJ_G0033191	Dkc1	85	84.733	Mus_caroli
ENSFALG00000011496	DKC1	85	83.221	ENSMUSG00000031403	Dkc1	86	83.521	Mus_musculus
ENSFALG00000011496	DKC1	92	79.261	MGP_PahariEiJ_G0031735	Dkc1	85	83.484	Mus_pahari
ENSFALG00000011496	DKC1	85	83.221	MGP_SPRETEiJ_G0034351	Dkc1	86	83.521	Mus_spretus
ENSFALG00000011496	DKC1	83	82.889	ENSMPUG00000016136	DKC1	82	82.889	Mustela_putorius_furo
ENSFALG00000011496	DKC1	85	77.974	ENSMLUG00000011918	DKC1	84	79.007	Myotis_lucifugus
ENSFALG00000011496	DKC1	55	73.776	ENSNGAG00000015724	-	93	73.776	Nannospalax_galili
ENSFALG00000011496	DKC1	86	80.088	ENSNBRG00000005638	dkc1	90	80.088	Neolamprologus_brichardi
ENSFALG00000011496	DKC1	85	83.149	ENSNLEG00000014323	DKC1	85	83.747	Nomascus_leucogenys
ENSFALG00000011496	DKC1	84	80.137	ENSMEUG00000001066	DKC1	94	79.680	Notamacropus_eugenii
ENSFALG00000011496	DKC1	68	80.952	ENSOPRG00000005248	DKC1	70	80.952	Ochotona_princeps
ENSFALG00000011496	DKC1	79	86.298	ENSODEG00000011816	-	86	84.199	Octodon_degus
ENSFALG00000011496	DKC1	55	74.126	ENSODEG00000000549	-	92	74.126	Octodon_degus
ENSFALG00000011496	DKC1	85	82.040	ENSONIG00000013889	dkc1	85	82.167	Oreochromis_niloticus
ENSFALG00000011496	DKC1	92	83.264	ENSOANG00000008713	-	87	86.215	Ornithorhynchus_anatinus
ENSFALG00000011496	DKC1	65	63.739	ENSOANG00000022295	-	83	64.430	Ornithorhynchus_anatinus
ENSFALG00000011496	DKC1	85	83.370	ENSOCUG00000012646	DKC1	85	83.973	Oryctolagus_cuniculus
ENSFALG00000011496	DKC1	84	80.182	ENSORLG00000018748	dkc1	78	85.360	Oryzias_latipes
ENSFALG00000011496	DKC1	84	81.591	ENSOMEG00000005786	dkc1	82	84.082	Oryzias_melastigma
ENSFALG00000011496	DKC1	85	81.779	ENSOGAG00000003399	DKC1	85	82.340	Otolemur_garnettii
ENSFALG00000011496	DKC1	85	82.774	ENSOARG00000003047	DKC1	86	83.673	Ovis_aries
ENSFALG00000011496	DKC1	85	82.705	ENSPPAG00000023820	DKC1	85	83.747	Pan_paniscus
ENSFALG00000011496	DKC1	83	83.182	ENSPPRG00000009104	DKC1	86	83.409	Panthera_pardus
ENSFALG00000011496	DKC1	87	81.619	ENSPTIG00000017469	DKC1	89	81.619	Panthera_tigris_altaica
ENSFALG00000011496	DKC1	95	79.800	ENSPTRG00000022449	DKC1	85	83.521	Pan_troglodytes
ENSFALG00000011496	DKC1	85	82.927	ENSPTRG00000043416	-	74	83.521	Pan_troglodytes
ENSFALG00000011496	DKC1	95	79.800	ENSPANG00000011978	DKC1	85	83.521	Papio_anubis
ENSFALG00000011496	DKC1	85	83.784	ENSPKIG00000008443	dkc1	84	89.303	Paramormyrops_kingsleyae
ENSFALG00000011496	DKC1	69	92.308	ENSPSIG00000013765	DKC1	86	92.308	Pelodiscus_sinensis
ENSFALG00000011496	DKC1	84	76.821	ENSPMGG00000004097	dkc1	73	82.716	Periophthalmus_magnuspinnatus
ENSFALG00000011496	DKC1	81	62.868	ENSPEMG00000013348	Dkc1	83	49.327	Peromyscus_maniculatus_bairdii
ENSFALG00000011496	DKC1	82	84.651	ENSPCIG00000016706	DKC1	73	84.018	Phascolarctos_cinereus
ENSFALG00000011496	DKC1	86	80.889	ENSPFOG00000018653	dkc1	85	81.963	Poecilia_formosa
ENSFALG00000011496	DKC1	86	80.889	ENSPLAG00000003272	dkc1	76	81.963	Poecilia_latipinna
ENSFALG00000011496	DKC1	86	80.889	ENSPMEG00000010413	dkc1	85	81.963	Poecilia_mexicana
ENSFALG00000011496	DKC1	86	81.556	ENSPREG00000004100	dkc1	83	81.735	Poecilia_reticulata
ENSFALG00000011496	DKC1	85	82.927	ENSPPYG00000020892	DKC1	86	83.521	Pongo_abelii
ENSFALG00000011496	DKC1	72	87.071	ENSPCAG00000015034	DKC1	73	87.071	Procavia_capensis
ENSFALG00000011496	DKC1	91	81.628	ENSPCOG00000026874	DKC1	85	83.747	Propithecus_coquereli
ENSFALG00000011496	DKC1	85	82.327	ENSPVAG00000009222	DKC1	85	83.486	Pteropus_vampyrus
ENSFALG00000011496	DKC1	89	78.419	ENSPNYG00000020063	dkc1	91	79.004	Pundamilia_nyererei
ENSFALG00000011496	DKC1	85	82.735	ENSPNAG00000005780	dkc1	85	82.500	Pygocentrus_nattereri
ENSFALG00000011496	DKC1	90	77.778	ENSRNOG00000055562	Dkc1	86	80.225	Rattus_norvegicus
ENSFALG00000011496	DKC1	95	79.800	ENSRBIG00000028457	DKC1	73	83.521	Rhinopithecus_bieti
ENSFALG00000011496	DKC1	95	79.800	ENSRROG00000044780	DKC1	85	83.521	Rhinopithecus_roxellana
ENSFALG00000011496	DKC1	77	70.149	YLR175W	-	88	67.517	Saccharomyces_cerevisiae
ENSFALG00000011496	DKC1	85	82.927	ENSSBOG00000033746	DKC1	85	83.747	Saimiri_boliviensis_boliviensis
ENSFALG00000011496	DKC1	84	83.636	ENSSHAG00000002463	DKC1	92	83.636	Sarcophilus_harrisii
ENSFALG00000011496	DKC1	88	81.345	ENSSFOG00015009585	dkc1	85	83.146	Scleropages_formosus
ENSFALG00000011496	DKC1	85	81.166	ENSSMAG00000002552	dkc1	88	81.591	Scophthalmus_maximus
ENSFALG00000011496	DKC1	92	78.395	ENSSDUG00000009963	dkc1	94	76.074	Seriola_dumerili
ENSFALG00000011496	DKC1	90	78.692	ENSSLDG00000019342	dkc1	95	78.742	Seriola_lalandi_dorsalis
ENSFALG00000011496	DKC1	85	77.827	ENSSARG00000001822	DKC1	87	78.458	Sorex_araneus
ENSFALG00000011496	DKC1	93	80.885	ENSSPUG00000018907	DKC1	84	84.633	Sphenodon_punctatus
ENSFALG00000011496	DKC1	85	81.716	ENSSPAG00000002585	dkc1	80	84.000	Stegastes_partitus
ENSFALG00000011496	DKC1	78	86.241	ENSSSCG00000012823	DKC1	88	84.149	Sus_scrofa
ENSFALG00000011496	DKC1	89	94.647	ENSTGUG00000006781	DKC1	100	94.647	Taeniopygia_guttata
ENSFALG00000011496	DKC1	90	79.114	ENSTRUG00000004413	dkc1	84	84.038	Takifugu_rubripes
ENSFALG00000011496	DKC1	84	66.667	ENSTNIG00000002582	dkc1	85	66.591	Tetraodon_nigroviridis
ENSFALG00000011496	DKC1	56	82.943	ENSTBEG00000011262	DKC1	85	82.143	Tupaia_belangeri
ENSFALG00000011496	DKC1	54	87.986	ENSTTRG00000008089	DKC1	55	87.986	Tursiops_truncatus
ENSFALG00000011496	DKC1	90	78.814	ENSUAMG00000022721	DKC1	90	84.954	Ursus_americanus
ENSFALG00000011496	DKC1	90	78.390	ENSUMAG00000016899	DKC1	100	83.373	Ursus_maritimus
ENSFALG00000011496	DKC1	79	71.845	ENSVVUG00000021671	-	75	71.845	Vulpes_vulpes
ENSFALG00000011496	DKC1	83	80.963	ENSVVUG00000020734	-	78	80.963	Vulpes_vulpes
ENSFALG00000011496	DKC1	85	83.820	ENSXETG00000032517	DKC1	84	84.282	Xenopus_tropicalis
ENSFALG00000011496	DKC1	86	80.222	ENSXCOG00000005498	dkc1	91	81.279	Xiphophorus_couchianus
ENSFALG00000011496	DKC1	86	81.111	ENSXMAG00000004919	dkc1	89	79.869	Xiphophorus_maculatus