EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000011572 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 2084 bases
Position: chrJH603317.1:1198353-1200436
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000012079	RRM_1	PF00076.22	1.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000012128	-	1046	-	ENSFALP00000012079	283 (aa)	-	U3KAM5

Gene Model

Click here to download ENSFALG00000011572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000011572's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000011572	-	52	30.120	ENSFALG00000011725	ELAVL1	72	30.120

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000011572	-	72	66.204	ENSAMXG00000007054	-	87	54.693	Astyanax_mexicanus
ENSFALG00000011572	-	99	50.000	ENSELUG00000006074	-	54	63.303	Esox_lucius
ENSFALG00000011572	-	72	62.212	ENSLBEG00000005286	-	77	57.196	Labrus_bergylta
ENSFALG00000011572	-	55	75.796	ENSLACG00000006906	-	56	61.572	Latimeria_chalumnae
ENSFALG00000011572	-	97	49.823	ENSNBRG00000016432	-	99	52.901	Neolamprologus_brichardi
ENSFALG00000011572	-	72	64.115	ENSONIG00000013963	-	80	59.677	Oreochromis_niloticus
ENSFALG00000011572	-	72	60.619	ENSPFOG00000022525	-	92	62.791	Poecilia_formosa
ENSFALG00000011572	-	78	63.090	ENSPNAG00000015725	-	79	56.508	Pygocentrus_nattereri
ENSFALG00000011572	-	66	58.621	ENSXCOG00000018353	-	87	52.222	Xiphophorus_couchianus
ENSFALG00000011572	-	72	60.268	ENSXMAG00000027266	-	88	53.608	Xiphophorus_maculatus