EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000011828 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RAB11B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 15508 bases
Position: chrJH603352.1:820394-835901
Accession: 101812004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000012348	MMR_HSR1	PF01926.23	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000012398	-	2335	-	ENSFALP00000012348	218 (aa)	XP_005059989	U3KBE4

Gene Model

Click here to download ENSFALG00000011828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000011828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000011828	-	96	40.000	ENSFALG00000007765	RAB30	97	40.000
ENSFALG00000011828	-	72	37.580	ENSFALG00000008011	RAB6A	75	37.580
ENSFALG00000011828	-	72	32.911	ENSFALG00000013196	MRAS	82	35.227
ENSFALG00000011828	-	81	39.227	ENSFALG00000011581	RAB33A	84	38.710
ENSFALG00000011828	-	94	42.718	ENSFALG00000009239	RAB5A	91	42.718
ENSFALG00000011828	-	70	46.711	ENSFALG00000007652	RAB35	89	40.000
ENSFALG00000011828	-	97	34.742	ENSFALG00000001373	-	99	34.742
ENSFALG00000011828	-	89	34.872	ENSFALG00000001708	RAB23	87	34.579
ENSFALG00000011828	-	78	33.721	ENSFALG00000004409	RAB20	70	33.721
ENSFALG00000011828	-	74	47.531	ENSFALG00000007160	RAB18	78	47.531
ENSFALG00000011828	-	97	87.204	ENSFALG00000010052	RAB11A	100	87.204
ENSFALG00000011828	-	75	30.636	ENSFALG00000008621	RASL11A	73	30.636
ENSFALG00000011828	-	96	41.232	ENSFALG00000003709	RAB19	94	41.232
ENSFALG00000011828	-	78	54.971	ENSFALG00000005613	RAB2A	81	54.971
ENSFALG00000011828	-	82	39.247	ENSFALG00000004886	RAB33B	80	39.247
ENSFALG00000011828	-	93	33.810	ENSFALG00000007362	RAB36	78	33.810
ENSFALG00000011828	-	79	46.857	ENSFALG00000000201	RAB39B	82	46.857
ENSFALG00000011828	-	55	30.081	ENSFALG00000014498	ARL4A	60	30.081
ENSFALG00000011828	-	85	41.935	ENSFALG00000001205	RAB15	88	41.935
ENSFALG00000011828	-	95	40.000	ENSFALG00000012783	RAB17	92	40.000
ENSFALG00000011828	-	72	40.491	ENSFALG00000007930	RAB7A	78	40.491
ENSFALG00000011828	-	53	31.034	ENSFALG00000014391	ARL14	59	31.034
ENSFALG00000011828	-	76	51.807	ENSFALG00000013624	RAB1A	81	51.807
ENSFALG00000011828	-	73	31.677	ENSFALG00000000852	-	77	31.677
ENSFALG00000011828	-	78	34.503	ENSFALG00000012145	HRAS	94	35.519
ENSFALG00000011828	-	77	41.618	ENSFALG00000015153	RAB9B	86	41.618
ENSFALG00000011828	-	81	39.560	ENSFALG00000015159	RAB9A	87	39.560
ENSFALG00000011828	-	68	34.000	ENSFALG00000003867	KRAS	85	35.185
ENSFALG00000011828	-	100	79.358	ENSFALG00000002594	-	92	79.358
ENSFALG00000011828	-	94	60.096	ENSFALG00000002597	RAB25	79	60.096
ENSFALG00000011828	-	84	32.787	ENSFALG00000003276	-	85	32.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000011828	-	100	97.248	ENSAPOG00000023455	rab11bb	100	97.248	Acanthochromis_polyacanthus
ENSFALG00000011828	-	100	97.706	ENSACIG00000024376	-	100	97.706	Amphilophus_citrinellus
ENSFALG00000011828	-	100	84.862	ENSACIG00000019631	rab11bb	100	84.862	Amphilophus_citrinellus
ENSFALG00000011828	-	100	97.706	ENSAOCG00000018849	-	100	97.706	Amphiprion_ocellaris
ENSFALG00000011828	-	100	97.248	ENSAOCG00000018239	rab11bb	100	97.248	Amphiprion_ocellaris
ENSFALG00000011828	-	100	97.248	ENSAPEG00000016590	rab11bb	100	97.248	Amphiprion_percula
ENSFALG00000011828	-	100	97.248	ENSATEG00000023725	-	100	97.248	Anabas_testudineus
ENSFALG00000011828	-	100	97.248	ENSATEG00000017696	rab11bb	100	97.248	Anabas_testudineus
ENSFALG00000011828	-	96	99.043	ENSAPLG00000011046	-	96	99.043	Anas_platyrhynchos
ENSFALG00000011828	-	100	97.248	ENSACLG00000007076	rab11bb	100	97.248	Astatotilapia_calliptera
ENSFALG00000011828	-	100	97.706	ENSACLG00000005446	-	100	97.706	Astatotilapia_calliptera
ENSFALG00000011828	-	100	97.706	ENSAMXG00000037623	-	100	97.706	Astyanax_mexicanus
ENSFALG00000011828	-	100	98.624	ENSAMXG00000042655	rab11bb	100	98.624	Astyanax_mexicanus
ENSFALG00000011828	-	100	98.624	ENSBTAG00000002475	RAB11B	100	98.624	Bos_taurus
ENSFALG00000011828	-	96	96.651	ENSCHIG00000022426	-	93	96.651	Capra_hircus
ENSFALG00000011828	-	100	98.624	ENSCATG00000029188	-	100	98.624	Cercocebus_atys
ENSFALG00000011828	-	100	100.000	ENSCPBG00000017056	-	100	100.000	Chrysemys_picta_bellii
ENSFALG00000011828	-	100	97.248	ENSCSEG00000007239	-	100	97.248	Cynoglossus_semilaevis
ENSFALG00000011828	-	100	97.248	ENSCSEG00000012149	rab11bb	100	97.248	Cynoglossus_semilaevis
ENSFALG00000011828	-	100	96.789	ENSCVAG00000019718	-	100	96.789	Cyprinodon_variegatus
ENSFALG00000011828	-	100	95.413	ENSCVAG00000019751	-	100	95.413	Cyprinodon_variegatus
ENSFALG00000011828	-	100	97.248	ENSCVAG00000017021	-	100	97.248	Cyprinodon_variegatus
ENSFALG00000011828	-	100	98.165	ENSDARG00000090086	rab11bb	100	98.165	Danio_rerio
ENSFALG00000011828	-	99	96.313	ENSETEG00000000905	-	99	96.313	Echinops_telfairi
ENSFALG00000011828	-	99	94.884	ENSEASG00005003708	-	99	94.884	Equus_asinus_asinus
ENSFALG00000011828	-	99	94.884	ENSECAG00000000716	RAB11B	99	94.884	Equus_caballus
ENSFALG00000011828	-	100	97.248	ENSELUG00000021148	rab11bb	100	97.248	Esox_lucius
ENSFALG00000011828	-	100	96.789	ENSELUG00000020948	-	98	98.438	Esox_lucius
ENSFALG00000011828	-	100	96.789	ENSELUG00000000916	-	100	96.789	Esox_lucius
ENSFALG00000011828	-	100	97.248	ENSFHEG00000022676	-	100	97.248	Fundulus_heteroclitus
ENSFALG00000011828	-	100	97.248	ENSFHEG00000018353	rab11bb	100	97.248	Fundulus_heteroclitus
ENSFALG00000011828	-	100	97.248	ENSGMOG00000009211	rab11bb	100	97.248	Gadus_morhua
ENSFALG00000011828	-	99	93.519	ENSGMOG00000009668	-	99	93.519	Gadus_morhua
ENSFALG00000011828	-	100	100.000	ENSGALG00000000613	RAB11B	100	100.000	Gallus_gallus
ENSFALG00000011828	-	100	97.248	ENSGAFG00000007102	rab11bb	100	97.248	Gambusia_affinis
ENSFALG00000011828	-	100	96.789	ENSGACG00000015479	rab11bb	100	96.789	Gasterosteus_aculeatus
ENSFALG00000011828	-	100	95.413	ENSGACG00000013297	-	99	95.413	Gasterosteus_aculeatus
ENSFALG00000011828	-	100	98.624	ENSGGOG00000014516	RAB11B	100	98.624	Gorilla_gorilla
ENSFALG00000011828	-	100	97.706	ENSHBUG00000009947	-	100	97.706	Haplochromis_burtoni
ENSFALG00000011828	-	100	97.248	ENSHBUG00000014777	rab11bb	100	97.248	Haplochromis_burtoni
ENSFALG00000011828	-	100	97.706	ENSHCOG00000002423	rab11bb	100	97.706	Hippocampus_comes
ENSFALG00000011828	-	100	95.413	ENSHCOG00000000954	-	100	95.413	Hippocampus_comes
ENSFALG00000011828	-	100	92.202	ENSHCOG00000000985	-	100	92.202	Hippocampus_comes
ENSFALG00000011828	-	100	98.165	ENSIPUG00000025100	rab11b	100	98.165	Ictalurus_punctatus
ENSFALG00000011828	-	100	98.165	ENSIPUG00000019927	rab11bb	100	98.165	Ictalurus_punctatus
ENSFALG00000011828	-	100	97.248	ENSKMAG00000009033	rab11bb	100	97.248	Kryptolebias_marmoratus
ENSFALG00000011828	-	100	97.706	ENSKMAG00000006170	-	100	97.706	Kryptolebias_marmoratus
ENSFALG00000011828	-	100	96.789	ENSLBEG00000015248	rab11bb	100	96.789	Labrus_bergylta
ENSFALG00000011828	-	100	97.248	ENSLBEG00000004172	-	100	97.248	Labrus_bergylta
ENSFALG00000011828	-	100	89.908	ENSLBEG00000005981	-	100	89.908	Labrus_bergylta
ENSFALG00000011828	-	100	100.000	ENSLACG00000016857	-	100	100.000	Latimeria_chalumnae
ENSFALG00000011828	-	100	98.624	ENSMFAG00000003654	RAB11B	100	98.624	Macaca_fascicularis
ENSFALG00000011828	-	100	98.624	ENSMLEG00000030601	-	100	98.624	Mandrillus_leucophaeus
ENSFALG00000011828	-	100	96.330	ENSMAMG00000018533	-	100	96.330	Mastacembelus_armatus
ENSFALG00000011828	-	100	96.789	ENSMAMG00000006378	rab11bb	100	96.789	Mastacembelus_armatus
ENSFALG00000011828	-	100	97.248	ENSMZEG00005003352	rab11bb	100	97.248	Maylandia_zebra
ENSFALG00000011828	-	100	97.706	ENSMZEG00005010975	-	100	97.706	Maylandia_zebra
ENSFALG00000011828	-	100	98.624	ENSMICG00000034065	-	100	98.624	Microcebus_murinus
ENSFALG00000011828	-	94	98.049	ENSMMOG00000007917	rab11bb	100	98.049	Mola_mola
ENSFALG00000011828	-	99	96.313	ENSMMOG00000001238	-	99	96.313	Mola_mola
ENSFALG00000011828	-	100	97.706	ENSMMOG00000001250	-	100	97.706	Mola_mola
ENSFALG00000011828	-	100	100.000	ENSMODG00000003841	-	100	100.000	Monodelphis_domestica
ENSFALG00000011828	-	100	97.248	ENSMALG00000022187	rab11bb	100	97.248	Monopterus_albus
ENSFALG00000011828	-	94	89.372	ENSMLUG00000006677	-	100	89.372	Myotis_lucifugus
ENSFALG00000011828	-	100	97.706	ENSNBRG00000023885	-	100	97.706	Neolamprologus_brichardi
ENSFALG00000011828	-	100	97.248	ENSNBRG00000000372	rab11bb	100	97.248	Neolamprologus_brichardi
ENSFALG00000011828	-	100	100.000	ENSMEUG00000003686	-	100	100.000	Notamacropus_eugenii
ENSFALG00000011828	-	100	97.706	ENSONIG00000002544	-	100	97.706	Oreochromis_niloticus
ENSFALG00000011828	-	100	97.248	ENSONIG00000010435	rab11bb	100	97.248	Oreochromis_niloticus
ENSFALG00000011828	-	50	98.165	ENSOANG00000031567	-	78	98.165	Ornithorhynchus_anatinus
ENSFALG00000011828	-	99	95.853	ENSORLG00000015284	-	72	95.853	Oryzias_latipes
ENSFALG00000011828	-	100	96.789	ENSORLG00000013938	rab11bb	100	96.789	Oryzias_latipes
ENSFALG00000011828	-	100	96.789	ENSORLG00020019393	rab11bb	100	96.789	Oryzias_latipes_hni
ENSFALG00000011828	-	99	95.853	ENSORLG00020020844	RAB11B	99	95.853	Oryzias_latipes_hni
ENSFALG00000011828	-	99	95.853	ENSORLG00015016999	RAB11B	99	95.853	Oryzias_latipes_hsok
ENSFALG00000011828	-	100	96.789	ENSORLG00015020173	rab11bb	100	96.789	Oryzias_latipes_hsok
ENSFALG00000011828	-	100	97.248	ENSOMEG00000017806	-	100	97.248	Oryzias_melastigma
ENSFALG00000011828	-	100	96.789	ENSOMEG00000002562	-	100	96.789	Oryzias_melastigma
ENSFALG00000011828	-	100	98.624	ENSPPAG00000028589	-	100	98.624	Pan_paniscus
ENSFALG00000011828	-	100	98.624	ENSPTRG00000010422	RAB11B	100	98.624	Pan_troglodytes
ENSFALG00000011828	-	100	98.624	ENSPANG00000007765	-	100	98.624	Papio_anubis
ENSFALG00000011828	-	100	97.248	ENSPKIG00000011640	rab11bb	100	97.248	Paramormyrops_kingsleyae
ENSFALG00000011828	-	98	98.131	ENSPKIG00000001389	-	69	98.131	Paramormyrops_kingsleyae
ENSFALG00000011828	-	100	98.624	ENSPKIG00000011703	-	100	98.624	Paramormyrops_kingsleyae
ENSFALG00000011828	-	98	94.521	ENSPSIG00000010242	-	85	94.521	Pelodiscus_sinensis
ENSFALG00000011828	-	100	95.872	ENSPMGG00000014333	-	100	95.872	Periophthalmus_magnuspinnatus
ENSFALG00000011828	-	99	93.548	ENSPMGG00000014336	-	99	93.548	Periophthalmus_magnuspinnatus
ENSFALG00000011828	-	100	97.248	ENSPMGG00000009435	rab11bb	100	97.248	Periophthalmus_magnuspinnatus
ENSFALG00000011828	-	97	97.642	ENSPCIG00000020371	-	99	97.642	Phascolarctos_cinereus
ENSFALG00000011828	-	100	97.248	ENSPFOG00000024114	-	100	97.248	Poecilia_formosa
ENSFALG00000011828	-	100	97.706	ENSPFOG00000006224	-	100	97.706	Poecilia_formosa
ENSFALG00000011828	-	100	97.706	ENSPLAG00000014207	-	100	97.706	Poecilia_latipinna
ENSFALG00000011828	-	100	97.248	ENSPLAG00000001598	rab11bb	100	97.248	Poecilia_latipinna
ENSFALG00000011828	-	100	97.248	ENSPMEG00000012389	rab11bb	100	97.248	Poecilia_mexicana
ENSFALG00000011828	-	100	97.706	ENSPMEG00000007842	-	100	97.706	Poecilia_mexicana
ENSFALG00000011828	-	100	97.248	ENSPREG00000014269	rab11bb	100	97.248	Poecilia_reticulata
ENSFALG00000011828	-	100	97.248	ENSPREG00000006336	-	100	97.248	Poecilia_reticulata
ENSFALG00000011828	-	100	97.706	ENSPNYG00000019611	-	100	97.706	Pundamilia_nyererei
ENSFALG00000011828	-	100	97.248	ENSPNYG00000004098	rab11bb	100	97.248	Pundamilia_nyererei
ENSFALG00000011828	-	100	98.624	ENSRROG00000037812	-	100	98.624	Rhinopithecus_roxellana
ENSFALG00000011828	-	97	98.113	ENSSHAG00000006816	-	97	98.113	Sarcophilus_harrisii
ENSFALG00000011828	-	100	98.624	ENSSFOG00015009042	rab11bb	100	98.624	Scleropages_formosus
ENSFALG00000011828	-	100	73.394	ENSSFOG00015006245	-	100	73.394	Scleropages_formosus
ENSFALG00000011828	-	100	96.789	ENSSMAG00000004922	rab11bb	100	96.789	Scophthalmus_maximus
ENSFALG00000011828	-	100	94.037	ENSSMAG00000018613	-	100	94.037	Scophthalmus_maximus
ENSFALG00000011828	-	100	97.706	ENSSDUG00000002934	-	100	97.706	Seriola_dumerili
ENSFALG00000011828	-	100	97.248	ENSSDUG00000013558	rab11bb	100	97.248	Seriola_dumerili
ENSFALG00000011828	-	100	97.706	ENSSLDG00000005275	-	100	97.706	Seriola_lalandi_dorsalis
ENSFALG00000011828	-	100	97.248	ENSSLDG00000020676	rab11bb	100	97.248	Seriola_lalandi_dorsalis
ENSFALG00000011828	-	100	99.541	ENSSPUG00000002243	-	100	99.541	Sphenodon_punctatus
ENSFALG00000011828	-	100	97.706	ENSSPAG00000014559	-	100	97.706	Stegastes_partitus
ENSFALG00000011828	-	100	97.248	ENSSPAG00000011419	rab11bb	100	97.248	Stegastes_partitus
ENSFALG00000011828	-	100	100.000	ENSTGUG00000000084	-	100	100.000	Taeniopygia_guttata
ENSFALG00000011828	-	99	97.685	ENSTRUG00000021619	-	100	97.685	Takifugu_rubripes
ENSFALG00000011828	-	99	95.392	ENSTRUG00000021614	-	99	95.392	Takifugu_rubripes
ENSFALG00000011828	-	100	97.248	ENSTRUG00000022029	rab11bb	100	97.248	Takifugu_rubripes
ENSFALG00000011828	-	93	96.059	ENSTNIG00000002003	-	100	96.059	Tetraodon_nigroviridis
ENSFALG00000011828	-	100	96.330	ENSTNIG00000011081	rab11bb	100	96.330	Tetraodon_nigroviridis
ENSFALG00000011828	-	99	94.931	ENSTNIG00000013184	-	99	94.931	Tetraodon_nigroviridis
ENSFALG00000011828	-	99	97.685	ENSTNIG00000013182	-	100	97.685	Tetraodon_nigroviridis
ENSFALG00000011828	-	94	98.537	ENSUAMG00000006639	-	99	98.537	Ursus_americanus
ENSFALG00000011828	-	100	98.630	ENSXETG00000025484	rab11b.1	99	98.630	Xenopus_tropicalis
ENSFALG00000011828	-	100	97.706	ENSXCOG00000009190	-	100	97.706	Xiphophorus_couchianus
ENSFALG00000011828	-	100	97.248	ENSXCOG00000008042	-	100	97.248	Xiphophorus_couchianus
ENSFALG00000011828	-	100	97.248	ENSXMAG00000024840	-	100	97.248	Xiphophorus_maculatus
ENSFALG00000011828	-	100	97.248	ENSXMAG00000011926	rab11bb	100	97.248	Xiphophorus_maculatus