EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000011923 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 2009 bases
Position: chrJH603331.1:280952-282960
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000012445	RRM_1	PF00076.22	2.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000012495	-	555	-	ENSFALP00000012445	161 (aa)	-	U3KBP1

Gene Model

Click here to download ENSFALG00000011923's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000011923's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000011923	-	98	64.968	ENSAPOG00000000183	-	61	65.385	Acanthochromis_polyacanthus
ENSFALG00000011923	-	96	57.831	ENSACIG00000020351	-	61	60.123	Amphilophus_citrinellus
ENSFALG00000011923	-	94	72.549	ENSACIG00000006351	alyref	58	78.182	Amphilophus_citrinellus
ENSFALG00000011923	-	96	73.077	ENSAOCG00000014012	alyref	59	80.368	Amphiprion_ocellaris
ENSFALG00000011923	-	98	63.057	ENSAOCG00000019305	-	61	66.026	Amphiprion_ocellaris
ENSFALG00000011923	-	96	73.718	ENSAPEG00000014603	alyref	59	80.368	Amphiprion_percula
ENSFALG00000011923	-	98	64.331	ENSAPEG00000013527	-	61	66.026	Amphiprion_percula
ENSFALG00000011923	-	96	70.000	ENSATEG00000004307	alyref	59	76.220	Anabas_testudineus
ENSFALG00000011923	-	96	66.026	ENSATEG00000000382	-	58	66.452	Anabas_testudineus
ENSFALG00000011923	-	86	94.928	ENSAPLG00000014745	-	100	94.928	Anas_platyrhynchos
ENSFALG00000011923	-	94	64.935	ENSACLG00000010184	-	60	62.577	Astatotilapia_calliptera
ENSFALG00000011923	-	96	73.248	ENSACLG00000008432	alyref	59	77.019	Astatotilapia_calliptera
ENSFALG00000011923	-	97	76.101	ENSAMXG00000007359	alyref	58	78.049	Astyanax_mexicanus
ENSFALG00000011923	-	94	54.375	ENSCING00000013568	-	56	58.940	Ciona_intestinalis
ENSFALG00000011923	-	94	55.921	ENSCSAVG00000003324	-	57	56.051	Ciona_savignyi
ENSFALG00000011923	-	96	76.433	ENSCSEG00000017800	alyref	60	77.640	Cynoglossus_semilaevis
ENSFALG00000011923	-	96	75.325	ENSCVAG00000014869	alyref	59	77.215	Cyprinodon_variegatus
ENSFALG00000011923	-	97	55.128	ENSCVAG00000007789	-	59	55.128	Cyprinodon_variegatus
ENSFALG00000011923	-	94	80.645	ENSDARG00000077732	alyref	57	79.245	Danio_rerio
ENSFALG00000011923	-	91	57.237	FBgn0010774	Ref1	57	52.318	Drosophila_melanogaster
ENSFALG00000011923	-	96	50.968	ENSEBUG00000006305	alyref	59	45.513	Eptatretus_burgeri
ENSFALG00000011923	-	97	62.821	ENSEBUG00000008253	alyref	58	62.264	Eptatretus_burgeri
ENSFALG00000011923	-	96	69.753	ENSELUG00000008849	-	64	71.687	Esox_lucius
ENSFALG00000011923	-	96	75.974	ENSELUG00000017178	alyref	58	77.215	Esox_lucius
ENSFALG00000011923	-	96	75.974	ENSFHEG00000019426	alyref	58	78.750	Fundulus_heteroclitus
ENSFALG00000011923	-	97	55.769	ENSFHEG00000004698	-	59	54.487	Fundulus_heteroclitus
ENSFALG00000011923	-	100	70.186	ENSGMOG00000009882	alyref	61	71.519	Gadus_morhua
ENSFALG00000011923	-	98	61.446	ENSGMOG00000013122	-	87	60.843	Gadus_morhua
ENSFALG00000011923	-	96	74.675	ENSGAFG00000006014	alyref	57	75.949	Gambusia_affinis
ENSFALG00000011923	-	96	55.195	ENSGAFG00000007573	-	58	53.896	Gambusia_affinis
ENSFALG00000011923	-	96	73.248	ENSHBUG00000020196	alyref	59	77.019	Haplochromis_burtoni
ENSFALG00000011923	-	94	64.516	ENSHBUG00000001454	-	60	63.190	Haplochromis_burtoni
ENSFALG00000011923	-	98	58.084	ENSHCOG00000012825	-	62	60.494	Hippocampus_comes
ENSFALG00000011923	-	98	79.747	ENSIPUG00000009469	alyref	59	80.255	Ictalurus_punctatus
ENSFALG00000011923	-	94	74.172	ENSSTOG00000016570	-	79	74.684	Ictidomys_tridecemlineatus
ENSFALG00000011923	-	96	61.290	ENSKMAG00000006462	-	58	61.438	Kryptolebias_marmoratus
ENSFALG00000011923	-	99	74.847	ENSKMAG00000008912	alyref	58	76.543	Kryptolebias_marmoratus
ENSFALG00000011923	-	99	55.000	ENSLBEG00000005387	-	64	59.302	Labrus_bergylta
ENSFALG00000011923	-	94	62.658	ENSLBEG00000012930	-	63	62.092	Labrus_bergylta
ENSFALG00000011923	-	96	74.675	ENSLBEG00000023118	alyref	57	78.395	Labrus_bergylta
ENSFALG00000011923	-	96	79.874	ENSLOCG00000013879	alyref	67	81.595	Lepisosteus_oculatus
ENSFALG00000011923	-	96	73.750	ENSMAMG00000003034	alyref	59	79.268	Mastacembelus_armatus
ENSFALG00000011923	-	98	59.236	ENSMAMG00000005464	-	61	59.615	Mastacembelus_armatus
ENSFALG00000011923	-	96	73.248	ENSMZEG00005008639	alyref	59	77.019	Maylandia_zebra
ENSFALG00000011923	-	94	64.286	ENSMZEG00005012096	-	60	61.963	Maylandia_zebra
ENSFALG00000011923	-	100	55.280	ENSMMOG00000007032	-	64	55.063	Mola_mola
ENSFALG00000011923	-	96	79.487	ENSMMOG00000012458	alyref	58	80.368	Mola_mola
ENSFALG00000011923	-	97	59.756	ENSMALG00000006054	-	62	60.366	Monopterus_albus
ENSFALG00000011923	-	96	79.355	ENSMLUG00000014372	-	57	78.710	Myotis_lucifugus
ENSFALG00000011923	-	97	65.868	ENSMLUG00000022467	-	60	64.634	Myotis_lucifugus
ENSFALG00000011923	-	100	78.882	ENSMLUG00000004098	-	59	78.205	Myotis_lucifugus
ENSFALG00000011923	-	97	67.273	ENSMLUG00000009247	-	61	65.455	Myotis_lucifugus
ENSFALG00000011923	-	97	68.750	ENSMLUG00000028605	-	58	69.375	Myotis_lucifugus
ENSFALG00000011923	-	97	66.667	ENSMLUG00000022178	-	59	65.409	Myotis_lucifugus
ENSFALG00000011923	-	97	70.513	ENSMLUG00000030671	-	57	69.231	Myotis_lucifugus
ENSFALG00000011923	-	100	75.776	ENSMLUG00000006521	-	57	77.419	Myotis_lucifugus
ENSFALG00000011923	-	94	90.728	ENSNGAG00000022014	-	63	91.772	Nannospalax_galili
ENSFALG00000011923	-	96	63.694	ENSNBRG00000017460	-	61	62.577	Neolamprologus_brichardi
ENSFALG00000011923	-	96	73.248	ENSNBRG00000001747	alyref	59	77.019	Neolamprologus_brichardi
ENSFALG00000011923	-	94	65.789	ENSONIG00000003296	-	60	65.190	Oreochromis_niloticus
ENSFALG00000011923	-	96	70.625	ENSONIG00000019434	alyref	59	77.246	Oreochromis_niloticus
ENSFALG00000011923	-	94	74.172	ENSORLG00020011942	alyref	58	77.500	Oryzias_latipes_hni
ENSFALG00000011923	-	96	58.333	ENSORLG00020015673	-	58	58.278	Oryzias_latipes_hni
ENSFALG00000011923	-	94	74.172	ENSORLG00015022664	alyref	58	77.500	Oryzias_latipes_hsok
ENSFALG00000011923	-	96	56.329	ENSORLG00015015143	-	58	56.954	Oryzias_latipes_hsok
ENSFALG00000011923	-	96	75.484	ENSOMEG00000019176	alyref	58	80.503	Oryzias_melastigma
ENSFALG00000011923	-	96	57.143	ENSOMEG00000007158	-	57	53.049	Oryzias_melastigma
ENSFALG00000011923	-	94	92.763	ENSPPAG00000036403	-	61	93.082	Pan_paniscus
ENSFALG00000011923	-	99	77.019	ENSPKIG00000007070	alyref	58	77.358	Paramormyrops_kingsleyae
ENSFALG00000011923	-	94	79.085	ENSPKIG00000006233	-	50	78.616	Paramormyrops_kingsleyae
ENSFALG00000011923	-	95	74.534	ENSPMGG00000016600	alyref	54	77.301	Periophthalmus_magnuspinnatus
ENSFALG00000011923	-	96	88.312	ENSPEMG00000016628	-	67	91.139	Peromyscus_maniculatus_bairdii
ENSFALG00000011923	-	96	54.545	ENSPFOG00000017094	-	57	55.629	Poecilia_formosa
ENSFALG00000011923	-	96	72.727	ENSPFOG00000022825	alyref	56	75.949	Poecilia_formosa
ENSFALG00000011923	-	96	72.727	ENSPLAG00000006948	alyref	57	75.949	Poecilia_latipinna
ENSFALG00000011923	-	96	54.545	ENSPLAG00000014380	-	57	55.629	Poecilia_latipinna
ENSFALG00000011923	-	96	54.545	ENSPMEG00000023039	-	57	55.629	Poecilia_mexicana
ENSFALG00000011923	-	96	74.026	ENSPMEG00000003547	alyref	57	75.949	Poecilia_mexicana
ENSFALG00000011923	-	99	55.975	ENSPREG00000003649	-	61	55.769	Poecilia_reticulata
ENSFALG00000011923	-	96	72.727	ENSPREG00000015795	alyref	57	76.582	Poecilia_reticulata
ENSFALG00000011923	-	96	73.248	ENSPNYG00000017498	alyref	59	77.019	Pundamilia_nyererei
ENSFALG00000011923	-	94	62.987	ENSPNYG00000002879	-	60	62.264	Pundamilia_nyererei
ENSFALG00000011923	-	96	75.472	ENSPNAG00000002531	alyref	59	76.398	Pygocentrus_nattereri
ENSFALG00000011923	-	100	91.304	ENSSBOG00000030924	-	73	93.038	Saimiri_boliviensis_boliviensis
ENSFALG00000011923	-	98	71.519	ENSSHAG00000000609	-	66	61.963	Sarcophilus_harrisii
ENSFALG00000011923	-	97	71.154	ENSSHAG00000012866	-	59	64.744	Sarcophilus_harrisii
ENSFALG00000011923	-	96	77.922	ENSSFOG00015003923	alyref	60	79.747	Scleropages_formosus
ENSFALG00000011923	-	99	83.019	ENSSFOG00015003678	alyref	71	81.132	Scleropages_formosus
ENSFALG00000011923	-	94	74.342	ENSSMAG00000009283	alyref	58	78.395	Scophthalmus_maximus
ENSFALG00000011923	-	97	59.763	ENSSMAG00000011169	-	62	61.963	Scophthalmus_maximus
ENSFALG00000011923	-	96	71.795	ENSSDUG00000016158	alyref	59	79.141	Seriola_dumerili
ENSFALG00000011923	-	96	72.611	ENSSLDG00000017803	alyref	59	78.049	Seriola_lalandi_dorsalis
ENSFALG00000011923	-	99	66.875	ENSSPAG00000017028	-	60	66.879	Stegastes_partitus
ENSFALG00000011923	-	99	56.140	ENSTRUG00000003051	-	64	55.952	Takifugu_rubripes
ENSFALG00000011923	-	99	58.750	ENSTNIG00000014136	-	61	57.325	Tetraodon_nigroviridis
ENSFALG00000011923	-	96	74.051	ENSTNIG00000011595	alyref	68	73.939	Tetraodon_nigroviridis
ENSFALG00000011923	-	96	90.260	ENSVVUG00000000272	-	71	92.405	Vulpes_vulpes
ENSFALG00000011923	-	96	75.974	ENSXCOG00000018047	alyref	57	75.776	Xiphophorus_couchianus
ENSFALG00000011923	-	98	55.414	ENSXMAG00000018086	-	60	55.769	Xiphophorus_maculatus
ENSFALG00000011923	-	96	75.974	ENSXMAG00000012218	alyref	57	75.776	Xiphophorus_maculatus