EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000012081 (Gene tree)
Gene ID: -
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 10530 bases
Position: chrJH603172.1:11838382-11848911
Accession: 101813477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000012612	CAF1	PF04857.20	1.4e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000012662	PNLDC1-201	1618	XM_016297377	ENSFALP00000012612	504 (aa)	XP_016152863	U3KC58

Gene Model

Click here to download ENSFALG00000012081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000012081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000012081	PNLDC1	99	57.455	ENSG00000146453	PNLDC1	96	57.455	Homo_sapiens
ENSFALG00000012081	PNLDC1	70	30.749	ENSAMEG00000011208	PARN	58	30.749	Ailuropoda_melanoleuca
ENSFALG00000012081	PNLDC1	99	57.853	ENSAMEG00000015371	PNLDC1	94	57.853	Ailuropoda_melanoleuca
ENSFALG00000012081	PNLDC1	100	78.543	ENSAPLG00000007014	PNLDC1	97	78.543	Anas_platyrhynchos
ENSFALG00000012081	PNLDC1	99	59.642	ENSACAG00000013667	PNLDC1	95	59.642	Anolis_carolinensis
ENSFALG00000012081	PNLDC1	99	57.058	ENSANAG00000034713	PNLDC1	95	57.084	Aotus_nancymaae
ENSFALG00000012081	PNLDC1	70	30.585	ENSANAG00000031516	PARN	58	30.105	Aotus_nancymaae
ENSFALG00000012081	PNLDC1	99	57.030	ENSBTAG00000015166	PNLDC1	95	57.030	Bos_taurus
ENSFALG00000012081	PNLDC1	70	30.263	ENSBTAG00000018097	PARN	57	30.769	Bos_taurus
ENSFALG00000012081	PNLDC1	99	56.859	ENSCJAG00000011865	PNLDC1	98	56.859	Callithrix_jacchus
ENSFALG00000012081	PNLDC1	70	30.319	ENSCJAG00000015866	PARN	58	30.319	Callithrix_jacchus
ENSFALG00000012081	PNLDC1	70	30.570	ENSCAFG00000018795	PARN	58	30.570	Canis_familiaris
ENSFALG00000012081	PNLDC1	99	58.449	ENSCAFG00000000740	PNLDC1	94	58.449	Canis_familiaris
ENSFALG00000012081	PNLDC1	99	56.126	ENSCAFG00020017742	PNLDC1	94	56.126	Canis_lupus_dingo
ENSFALG00000012081	PNLDC1	70	30.570	ENSCAFG00020024126	PARN	58	30.570	Canis_lupus_dingo
ENSFALG00000012081	PNLDC1	99	56.126	ENSCHIG00000003141	PNLDC1	95	55.268	Capra_hircus
ENSFALG00000012081	PNLDC1	70	31.053	ENSCHIG00000018143	PARN	58	31.053	Capra_hircus
ENSFALG00000012081	PNLDC1	99	55.865	ENSTSYG00000005606	PNLDC1	94	55.865	Carlito_syrichta
ENSFALG00000012081	PNLDC1	91	47.957	ENSCAPG00000011893	PNLDC1	89	47.957	Cavia_aperea
ENSFALG00000012081	PNLDC1	99	56.151	ENSCPOG00000019565	PNLDC1	94	56.151	Cavia_porcellus
ENSFALG00000012081	PNLDC1	99	57.455	ENSCCAG00000026232	PNLDC1	94	57.455	Cebus_capucinus
ENSFALG00000012081	PNLDC1	70	30.105	ENSCCAG00000030367	PARN	58	30.585	Cebus_capucinus
ENSFALG00000012081	PNLDC1	99	56.461	ENSCATG00000033196	PNLDC1	94	56.461	Cercocebus_atys
ENSFALG00000012081	PNLDC1	99	58.847	ENSCLAG00000003228	PNLDC1	94	58.847	Chinchilla_lanigera
ENSFALG00000012081	PNLDC1	99	55.644	ENSCSAG00000012478	PNLDC1	96	55.644	Chlorocebus_sabaeus
ENSFALG00000012081	PNLDC1	96	68.116	ENSCPBG00000004050	PNLDC1	94	68.116	Chrysemys_picta_bellii
ENSFALG00000012081	PNLDC1	99	56.262	ENSCANG00000043076	PNLDC1	96	56.262	Colobus_angolensis_palliatus
ENSFALG00000012081	PNLDC1	99	57.455	ENSCGRG00001007470	-	94	57.455	Cricetulus_griseus_chok1gshd
ENSFALG00000012081	PNLDC1	99	46.429	ENSCGRG00001011981	-	92	46.429	Cricetulus_griseus_chok1gshd
ENSFALG00000012081	PNLDC1	99	57.455	ENSCGRG00000010221	-	94	57.455	Cricetulus_griseus_crigri
ENSFALG00000012081	PNLDC1	99	47.817	ENSCGRG00000003103	-	93	47.817	Cricetulus_griseus_crigri
ENSFALG00000012081	PNLDC1	99	57.396	ENSDNOG00000013709	PNLDC1	95	57.396	Dasypus_novemcinctus
ENSFALG00000012081	PNLDC1	99	54.743	ENSDORG00000011517	Pnldc1	94	54.743	Dipodomys_ordii
ENSFALG00000012081	PNLDC1	96	52.469	ENSETEG00000007587	PNLDC1	97	52.469	Echinops_telfairi
ENSFALG00000012081	PNLDC1	98	32.806	ENSEBUG00000008118	PNLDC1	93	32.806	Eptatretus_burgeri
ENSFALG00000012081	PNLDC1	70	31.053	ENSEASG00005011400	PARN	58	31.053	Equus_asinus_asinus
ENSFALG00000012081	PNLDC1	99	54.510	ENSEASG00005019029	PNLDC1	94	54.510	Equus_asinus_asinus
ENSFALG00000012081	PNLDC1	70	31.053	ENSECAG00000017792	PARN	58	31.053	Equus_caballus
ENSFALG00000012081	PNLDC1	99	59.443	ENSECAG00000012898	PNLDC1	94	59.443	Equus_caballus
ENSFALG00000012081	PNLDC1	70	65.517	ENSEEUG00000005717	-	84	65.517	Erinaceus_europaeus
ENSFALG00000012081	PNLDC1	99	58.648	ENSFCAG00000002848	PNLDC1	94	58.648	Felis_catus
ENSFALG00000012081	PNLDC1	70	31.579	ENSFCAG00000044961	PARN	58	31.579	Felis_catus
ENSFALG00000012081	PNLDC1	99	58.020	ENSFDAG00000021334	PNLDC1	94	58.020	Fukomys_damarensis
ENSFALG00000012081	PNLDC1	78	78.005	ENSGALG00000011624	PNLDC1	76	78.005	Gallus_gallus
ENSFALG00000012081	PNLDC1	99	68.064	ENSGAGG00000015276	PNLDC1	100	67.909	Gopherus_agassizii
ENSFALG00000012081	PNLDC1	99	57.256	ENSGGOG00000014077	PNLDC1	94	57.256	Gorilla_gorilla
ENSFALG00000012081	PNLDC1	69	31.414	ENSHGLG00000010886	PARN	58	31.414	Heterocephalus_glaber_female
ENSFALG00000012081	PNLDC1	99	58.449	ENSHGLG00000006889	PNLDC1	94	58.449	Heterocephalus_glaber_female
ENSFALG00000012081	PNLDC1	69	31.414	ENSHGLG00100014659	PARN	58	31.414	Heterocephalus_glaber_male
ENSFALG00000012081	PNLDC1	99	58.449	ENSHGLG00100018275	PNLDC1	94	58.449	Heterocephalus_glaber_male
ENSFALG00000012081	PNLDC1	99	58.974	ENSSTOG00000005595	PNLDC1	95	58.974	Ictidomys_tridecemlineatus
ENSFALG00000012081	PNLDC1	70	31.053	ENSSTOG00000007519	PARN	58	31.053	Ictidomys_tridecemlineatus
ENSFALG00000012081	PNLDC1	99	53.968	ENSJJAG00000009937	Pnldc1	94	53.968	Jaculus_jaculus
ENSFALG00000012081	PNLDC1	57	57.732	ENSLAFG00000030189	PNLDC1	84	57.732	Loxodonta_africana
ENSFALG00000012081	PNLDC1	99	56.660	ENSMFAG00000041296	PNLDC1	94	56.660	Macaca_fascicularis
ENSFALG00000012081	PNLDC1	99	56.660	ENSMMUG00000004181	PNLDC1	96	55.969	Macaca_mulatta
ENSFALG00000012081	PNLDC1	99	56.660	ENSMNEG00000034271	PNLDC1	94	56.660	Macaca_nemestrina
ENSFALG00000012081	PNLDC1	99	54.076	ENSMLEG00000044059	PNLDC1	94	54.076	Mandrillus_leucophaeus
ENSFALG00000012081	PNLDC1	99	76.143	ENSMGAG00000012470	PNLDC1	97	76.143	Meleagris_gallopavo
ENSFALG00000012081	PNLDC1	99	47.505	ENSMAUG00000012298	Pnldc1	94	47.505	Mesocricetus_auratus
ENSFALG00000012081	PNLDC1	70	31.053	ENSMICG00000016053	PARN	58	30.570	Microcebus_murinus
ENSFALG00000012081	PNLDC1	99	57.256	ENSMICG00000008021	PNLDC1	94	57.256	Microcebus_murinus
ENSFALG00000012081	PNLDC1	70	30.749	ENSMOCG00000022211	Parn	74	30.749	Microtus_ochrogaster
ENSFALG00000012081	PNLDC1	99	57.822	ENSMOCG00000014287	Pnldc1	94	57.822	Microtus_ochrogaster
ENSFALG00000012081	PNLDC1	70	31.152	ENSMODG00000004915	PARN	74	31.152	Monodelphis_domestica
ENSFALG00000012081	PNLDC1	99	61.144	ENSMODG00000007420	PNLDC1	94	61.144	Monodelphis_domestica
ENSFALG00000012081	PNLDC1	99	57.455	MGP_CAROLIEiJ_G0021045	Pnldc1	94	57.455	Mus_caroli
ENSFALG00000012081	PNLDC1	99	57.654	ENSMUSG00000073460	Pnldc1	94	57.654	Mus_musculus
ENSFALG00000012081	PNLDC1	70	31.806	MGP_PahariEiJ_G0016172	Parn	58	31.806	Mus_pahari
ENSFALG00000012081	PNLDC1	99	57.480	MGP_PahariEiJ_G0023361	Pnldc1	95	57.480	Mus_pahari
ENSFALG00000012081	PNLDC1	99	57.654	MGP_SPRETEiJ_G0021975	Pnldc1	94	57.654	Mus_spretus
ENSFALG00000012081	PNLDC1	70	30.570	ENSMPUG00000014464	PARN	58	30.570	Mustela_putorius_furo
ENSFALG00000012081	PNLDC1	99	57.654	ENSMPUG00000004920	PNLDC1	94	57.654	Mustela_putorius_furo
ENSFALG00000012081	PNLDC1	99	59.245	ENSMLUG00000000747	PNLDC1	94	59.245	Myotis_lucifugus
ENSFALG00000012081	PNLDC1	70	30.491	ENSMLUG00000005414	PARN	75	30.491	Myotis_lucifugus
ENSFALG00000012081	PNLDC1	99	58.847	ENSNGAG00000017714	Pnldc1	94	58.847	Nannospalax_galili
ENSFALG00000012081	PNLDC1	99	57.654	ENSNLEG00000011282	PNLDC1	96	57.654	Nomascus_leucogenys
ENSFALG00000012081	PNLDC1	58	53.425	ENSMEUG00000014042	-	100	53.425	Notamacropus_eugenii
ENSFALG00000012081	PNLDC1	63	50.314	ENSMEUG00000011926	-	63	50.314	Notamacropus_eugenii
ENSFALG00000012081	PNLDC1	74	55.703	ENSOPRG00000003813	PNLDC1	71	55.703	Ochotona_princeps
ENSFALG00000012081	PNLDC1	99	58.498	ENSODEG00000008047	PNLDC1	95	58.498	Octodon_degus
ENSFALG00000012081	PNLDC1	99	50.996	ENSOANG00000012199	PNLDC1	94	51.195	Ornithorhynchus_anatinus
ENSFALG00000012081	PNLDC1	99	57.256	ENSOCUG00000013867	PNLDC1	94	57.256	Oryctolagus_cuniculus
ENSFALG00000012081	PNLDC1	99	57.654	ENSOGAG00000007331	PNLDC1	94	57.654	Otolemur_garnettii
ENSFALG00000012081	PNLDC1	70	30.971	ENSOARG00000007574	PARN	75	30.971	Ovis_aries
ENSFALG00000012081	PNLDC1	99	55.842	ENSOARG00000004585	PNLDC1	94	55.842	Ovis_aries
ENSFALG00000012081	PNLDC1	99	56.859	ENSPPAG00000026651	PNLDC1	94	56.859	Pan_paniscus
ENSFALG00000012081	PNLDC1	70	31.579	ENSPPRG00000018583	PARN	58	31.579	Panthera_pardus
ENSFALG00000012081	PNLDC1	99	58.648	ENSPPRG00000012854	PNLDC1	94	58.648	Panthera_pardus
ENSFALG00000012081	PNLDC1	99	56.660	ENSPTIG00000011501	PNLDC1	94	56.660	Panthera_tigris_altaica
ENSFALG00000012081	PNLDC1	70	31.579	ENSPTIG00000012135	PARN	58	31.579	Panthera_tigris_altaica
ENSFALG00000012081	PNLDC1	99	56.859	ENSPTRG00000018762	PNLDC1	96	56.859	Pan_troglodytes
ENSFALG00000012081	PNLDC1	99	56.660	ENSPANG00000022009	PNLDC1	94	56.660	Papio_anubis
ENSFALG00000012081	PNLDC1	51	70.817	ENSPSIG00000011419	PNLDC1	86	70.817	Pelodiscus_sinensis
ENSFALG00000012081	PNLDC1	70	30.890	ENSPSIG00000014804	PARN	58	30.890	Pelodiscus_sinensis
ENSFALG00000012081	PNLDC1	99	58.449	ENSPEMG00000016301	Pnldc1	94	58.449	Peromyscus_maniculatus_bairdii
ENSFALG00000012081	PNLDC1	86	63.218	ENSPCIG00000023412	PNLDC1	98	63.218	Phascolarctos_cinereus
ENSFALG00000012081	PNLDC1	99	54.134	ENSPPYG00000017148	PNLDC1	94	54.134	Pongo_abelii
ENSFALG00000012081	PNLDC1	99	52.286	ENSPCAG00000014169	PNLDC1	94	52.286	Procavia_capensis
ENSFALG00000012081	PNLDC1	70	30.263	ENSPCOG00000019292	PARN	57	30.263	Propithecus_coquereli
ENSFALG00000012081	PNLDC1	99	57.256	ENSPCOG00000025722	PNLDC1	94	57.256	Propithecus_coquereli
ENSFALG00000012081	PNLDC1	70	31.250	ENSPVAG00000002547	PARN	58	31.250	Pteropus_vampyrus
ENSFALG00000012081	PNLDC1	70	60.446	ENSPVAG00000005325	PNLDC1	67	60.446	Pteropus_vampyrus
ENSFALG00000012081	PNLDC1	99	58.052	ENSRNOG00000023140	Pnldc1	100	54.601	Rattus_norvegicus
ENSFALG00000012081	PNLDC1	99	56.660	ENSRBIG00000033806	PNLDC1	94	56.660	Rhinopithecus_bieti
ENSFALG00000012081	PNLDC1	99	56.660	ENSRROG00000043919	PNLDC1	96	56.660	Rhinopithecus_roxellana
ENSFALG00000012081	PNLDC1	70	30.400	ENSSBOG00000034726	PARN	57	30.400	Saimiri_boliviensis_boliviensis
ENSFALG00000012081	PNLDC1	99	57.455	ENSSBOG00000019135	PNLDC1	94	57.455	Saimiri_boliviensis_boliviensis
ENSFALG00000012081	PNLDC1	70	31.316	ENSSHAG00000008493	PARN	82	31.316	Sarcophilus_harrisii
ENSFALG00000012081	PNLDC1	99	60.947	ENSSHAG00000015192	PNLDC1	96	60.947	Sarcophilus_harrisii
ENSFALG00000012081	PNLDC1	62	30.473	ENSSARG00000014339	PARN	57	30.473	Sorex_araneus
ENSFALG00000012081	PNLDC1	56	65.493	ENSSPUG00000004627	PNLDC1	99	62.667	Sphenodon_punctatus
ENSFALG00000012081	PNLDC1	99	57.115	ENSSSCG00000004046	PNLDC1	98	57.115	Sus_scrofa
ENSFALG00000012081	PNLDC1	70	31.053	ENSSSCG00000007878	PARN	51	31.053	Sus_scrofa
ENSFALG00000012081	PNLDC1	97	92.813	ENSTGUG00000011418	PNLDC1	100	92.813	Taeniopygia_guttata
ENSFALG00000012081	PNLDC1	99	49.702	ENSTBEG00000009131	PNLDC1	96	49.702	Tupaia_belangeri
ENSFALG00000012081	PNLDC1	70	30.000	ENSTTRG00000002843	PARN	58	30.000	Tursiops_truncatus
ENSFALG00000012081	PNLDC1	71	55.833	ENSTTRG00000010409	PNLDC1	67	55.833	Tursiops_truncatus
ENSFALG00000012081	PNLDC1	99	48.828	ENSUAMG00000015783	PNLDC1	94	48.828	Ursus_americanus
ENSFALG00000012081	PNLDC1	70	30.829	ENSUMAG00000004527	PARN	58	30.829	Ursus_maritimus
ENSFALG00000012081	PNLDC1	99	53.543	ENSUMAG00000011903	PNLDC1	99	53.543	Ursus_maritimus
ENSFALG00000012081	PNLDC1	70	30.570	ENSVVUG00000019509	PARN	58	30.570	Vulpes_vulpes
ENSFALG00000012081	PNLDC1	97	58.032	ENSVVUG00000006586	PNLDC1	98	58.932	Vulpes_vulpes