EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFALG00000012150 (Gene tree)
Gene ID
-
Gene Symbol
PATL1
Alias
FLJ36874|Pat1b
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Ficedula_albicollis
Status
putative
Strand
Plus strand
Length
7017 bases
Position
chrJH603356.1:1008147-1015163
Accession
26721
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFALP00000012698PAT1PF09770.92.5e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFALT00000012748PATL1-2013213-ENSFALP00000012698763 (aa)-U3KCE4
Gene Model
Click here to download ENSFALG00000012150's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000012150's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFALG00000012150PATL15338.293ENSFALG00000009768PATL29831.170
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFALG00000012150PATL15436.779ENSG00000229474PATL29937.705Homo_sapiens
ENSFALG00000012150PATL19980.183ENSG00000166889PATL19980.183Homo_sapiens
ENSFALG00000012150PATL15454.940ENSAPOG00000021290patl19947.472Acanthochromis_polyacanthus
ENSFALG00000012150PATL16836.312ENSAPOG00000022988patl27235.932Acanthochromis_polyacanthus
ENSFALG00000012150PATL19979.714ENSAMEG00000014215PATL19979.844Ailuropoda_melanoleuca
ENSFALG00000012150PATL15336.341ENSAMEG00000014997PATL27436.957Ailuropoda_melanoleuca
ENSFALG00000012150PATL19647.005ENSACIG00000005182patl19947.191Amphilophus_citrinellus
ENSFALG00000012150PATL16935.466ENSAOCG00000023738patl25237.799Amphiprion_ocellaris
ENSFALG00000012150PATL15455.448ENSAOCG00000021993patl19548.210Amphiprion_ocellaris
ENSFALG00000012150PATL16235.404ENSAPEG00000011299patl26237.170Amphiprion_percula
ENSFALG00000012150PATL15974.286ENSAPEG00000021391patl17251.662Amphiprion_percula
ENSFALG00000012150PATL16435.020ENSATEG00000019567patl26136.754Anabas_testudineus
ENSFALG00000012150PATL19256.897ENSATEG00000002230patl18351.613Anabas_testudineus
ENSFALG00000012150PATL15339.268ENSAPLG00000003980PATL26439.268Anas_platyrhynchos
ENSFALG00000012150PATL17179.129ENSAPLG00000013394PATL110079.673Anas_platyrhynchos
ENSFALG00000012150PATL19981.723ENSACAG00000006607PATL19981.593Anolis_carolinensis
ENSFALG00000012150PATL19979.765ENSANAG00000023078PATL19980.834Aotus_nancymaae
ENSFALG00000012150PATL16262.712ENSACLG00000005144patl18251.385Astatotilapia_calliptera
ENSFALG00000012150PATL16235.685ENSACLG00000010326patl25437.500Astatotilapia_calliptera
ENSFALG00000012150PATL16336.492ENSAMXG00000020293patl29430.799Astyanax_mexicanus
ENSFALG00000012150PATL19645.211ENSAMXG00000010731patl19848.050Astyanax_mexicanus
ENSFALG00000012150PATL19978.879ENSBTAG00000005913PATL19980.469Bos_taurus
ENSFALG00000012150PATL19979.896ENSCJAG00000016192PATL19980.965Callithrix_jacchus
ENSFALG00000012150PATL15636.952ENSCJAG00000002379PATL27237.379Callithrix_jacchus
ENSFALG00000012150PATL16534.930ENSCAFG00000013629PATL28834.861Canis_familiaris
ENSFALG00000012150PATL19980.208ENSCAFG00000007581PATL19980.339Canis_familiaris
ENSFALG00000012150PATL19980.158ENSCAFG00020001648PATL19980.184Canis_lupus_dingo
ENSFALG00000012150PATL16534.731ENSCAFG00020022169PATL28734.731Canis_lupus_dingo
ENSFALG00000012150PATL19977.893ENSCHIG00000025913PATL19979.481Capra_hircus
ENSFALG00000012150PATL16037.013ENSCHIG00000026665PATL27438.609Capra_hircus
ENSFALG00000012150PATL19980.052ENSTSYG00000012748PATL19581.127Carlito_syrichta
ENSFALG00000012150PATL19978.776ENSCAPG00000013668PATL19979.974Cavia_aperea
ENSFALG00000012150PATL19976.972ENSCPOG00000006827PATL19978.145Cavia_porcellus
ENSFALG00000012150PATL19979.765ENSCCAG00000023759PATL19980.834Cebus_capucinus
ENSFALG00000012150PATL19979.504ENSCATG00000009629PATL19980.574Cercocebus_atys
ENSFALG00000012150PATL19979.112ENSCLAG00000003427PATL110079.112Chinchilla_lanigera
ENSFALG00000012150PATL15136.990ENSCLAG00000014407PATL27336.990Chinchilla_lanigera
ENSFALG00000012150PATL19080.548ENSCSAG00000006095PATL19981.727Chlorocebus_sabaeus
ENSFALG00000012150PATL16883.059ENSCHOG00000001611PATL18385.343Choloepus_hoffmanni
ENSFALG00000012150PATL15339.609ENSCPBG00000006150PATL25939.609Chrysemys_picta_bellii
ENSFALG00000012150PATL17932.288ENSCING00000021535-9831.150Ciona_intestinalis
ENSFALG00000012150PATL15437.379ENSCANG00000013856PATL27237.379Colobus_angolensis_palliatus
ENSFALG00000012150PATL19979.634ENSCANG00000039197PATL19980.704Colobus_angolensis_palliatus
ENSFALG00000012150PATL19980.364ENSCGRG00001024927Patl19980.364Cricetulus_griseus_chok1gshd
ENSFALG00000012150PATL19980.469ENSCGRG00000000461Patl110080.469Cricetulus_griseus_crigri
ENSFALG00000012150PATL18880.000ENSCSEG00000008261patl18158.750Cynoglossus_semilaevis
ENSFALG00000012150PATL16433.939ENSCSEG00000009438patl25735.731Cynoglossus_semilaevis
ENSFALG00000012150PATL16132.165ENSCVAG00000016203patl26332.870Cyprinodon_variegatus
ENSFALG00000012150PATL18952.644ENSCVAG00000006664patl19945.854Cyprinodon_variegatus
ENSFALG00000012150PATL16934.358ENSDARG00000089567patl25637.890Danio_rerio
ENSFALG00000012150PATL19646.750ENSDARG00000017423patl19947.433Danio_rerio
ENSFALG00000012150PATL19973.403ENSDNOG00000038865PATL110081.193Dasypus_novemcinctus
ENSFALG00000012150PATL19978.329ENSDORG00000000237Patl19979.400Dipodomys_ordii
ENSFALG00000012150PATL15436.744ENSDORG00000026649Patl27237.692Dipodomys_ordii
ENSFALG00000012150PATL19978.906ENSEASG00005007963PATL19980.494Equus_asinus_asinus
ENSFALG00000012150PATL19978.906ENSECAG00000011411PATL19980.494Equus_caballus
ENSFALG00000012150PATL16036.268ENSELUG00000023244patl25637.882Esox_lucius
ENSFALG00000012150PATL19645.568ENSELUG00000024249patl19946.753Esox_lucius
ENSFALG00000012150PATL19979.661ENSFCAG00000015573PATL19980.052Felis_catus
ENSFALG00000012150PATL15436.408ENSFCAG00000027170PATL27337.019Felis_catus
ENSFALG00000012150PATL19978.385ENSFDAG00000016128PATL110079.036Fukomys_damarensis
ENSFALG00000012150PATL15235.589ENSFDAG00000012242PATL27336.181Fukomys_damarensis
ENSFALG00000012150PATL16957.108ENSFHEG00000017790patl19251.735Fundulus_heteroclitus
ENSFALG00000012150PATL15533.566ENSGMOG00000005666patl29933.816Gadus_morhua
ENSFALG00000012150PATL19987.152ENSGALG00000042641PATL19987.417Gallus_gallus
ENSFALG00000012150PATL16437.271ENSGALG00000002167PATL26036.381Gallus_gallus
ENSFALG00000012150PATL19943.187ENSGAFG00000006508patl19946.198Gambusia_affinis
ENSFALG00000012150PATL16136.403ENSGAFG00000019344patl25538.443Gambusia_affinis
ENSFALG00000012150PATL19949.674ENSGACG00000016448patl19951.226Gasterosteus_aculeatus
ENSFALG00000012150PATL19985.752ENSGAGG00000004461PATL19987.032Gopherus_agassizii
ENSFALG00000012150PATL15436.893ENSGGOG00000025923PATL27236.804Gorilla_gorilla
ENSFALG00000012150PATL19979.243ENSGGOG00000004335PATL19980.313Gorilla_gorilla
ENSFALG00000012150PATL16262.712ENSHBUG00000005365patl18251.703Haplochromis_burtoni
ENSFALG00000012150PATL16236.100ENSHBUG00000005929patl26236.941Haplochromis_burtoni
ENSFALG00000012150PATL19979.140ENSHGLG00000018173PATL19979.140Heterocephalus_glaber_female
ENSFALG00000012150PATL19978.665ENSHGLG00100003453PATL110078.665Heterocephalus_glaber_male
ENSFALG00000012150PATL19264.286ENSHCOG00000001898patl18450.304Hippocampus_comes
ENSFALG00000012150PATL16534.646ENSHCOG00000016754patl25536.211Hippocampus_comes
ENSFALG00000012150PATL15736.795ENSIPUG00000020692patl29436.977Ictalurus_punctatus
ENSFALG00000012150PATL15438.015ENSSTOG00000033848PATL27238.015Ictidomys_tridecemlineatus
ENSFALG00000012150PATL19879.815ENSSTOG00000013764PATL19980.764Ictidomys_tridecemlineatus
ENSFALG00000012150PATL19979.477ENSJJAG00000010135Patl110079.477Jaculus_jaculus
ENSFALG00000012150PATL19080.000ENSKMAG00000020848patl17450.075Kryptolebias_marmoratus
ENSFALG00000012150PATL15435.492ENSKMAG00000021275patl25535.059Kryptolebias_marmoratus
ENSFALG00000012150PATL19166.071ENSLBEG00000023617patl19151.593Labrus_bergylta
ENSFALG00000012150PATL15437.650ENSLBEG00000022344patl25337.650Labrus_bergylta
ENSFALG00000012150PATL19857.867ENSLACG00000004640PATL19957.867Latimeria_chalumnae
ENSFALG00000012150PATL19931.100ENSLACG00000005291-9830.981Latimeria_chalumnae
ENSFALG00000012150PATL19949.022ENSLOCG00000000717patl19949.077Lepisosteus_oculatus
ENSFALG00000012150PATL15137.275ENSLAFG00000031124PATL27137.275Loxodonta_africana
ENSFALG00000012150PATL19978.068ENSLAFG00000015161PATL19979.688Loxodonta_africana
ENSFALG00000012150PATL19979.504ENSMFAG00000040851PATL19980.574Macaca_fascicularis
ENSFALG00000012150PATL19979.504ENSMMUG00000017287PATL19980.574Macaca_mulatta
ENSFALG00000012150PATL19979.504ENSMNEG00000038692PATL19980.574Macaca_nemestrina
ENSFALG00000012150PATL19979.504ENSMLEG00000030044PATL19980.574Mandrillus_leucophaeus
ENSFALG00000012150PATL18877.419ENSMAMG00000003950patl19847.512Mastacembelus_armatus
ENSFALG00000012150PATL15437.108ENSMAMG00000013327patl26136.779Mastacembelus_armatus
ENSFALG00000012150PATL16262.712ENSMZEG00005013404patl18251.385Maylandia_zebra
ENSFALG00000012150PATL16235.685ENSMZEG00005014292patl25437.500Maylandia_zebra
ENSFALG00000012150PATL16437.959ENSMGAG00000001309PATL28135.870Meleagris_gallopavo
ENSFALG00000012150PATL19286.686ENSMGAG00000003406PATL19986.827Meleagris_gallopavo
ENSFALG00000012150PATL18784.969ENSMAUG00000012059Patl19784.969Mesocricetus_auratus
ENSFALG00000012150PATL19975.623ENSMICG00000004172PATL19979.661Microcebus_murinus
ENSFALG00000012150PATL19980.704ENSMOCG00000010087Patl19980.704Microtus_ochrogaster
ENSFALG00000012150PATL15236.250ENSMOCG00000015367Patl27236.500Microtus_ochrogaster
ENSFALG00000012150PATL16231.435ENSMMOG00000001299patl26032.771Mola_mola
ENSFALG00000012150PATL19845.953ENSMMOG00000013711patl19945.932Mola_mola
ENSFALG00000012150PATL15937.199ENSMODG00000017690PATL27037.890Monodelphis_domestica
ENSFALG00000012150PATL19982.853ENSMODG00000020201PATL19983.115Monodelphis_domestica
ENSFALG00000012150PATL19342.234ENSMALG00000018706patl19944.832Monopterus_albus
ENSFALG00000012150PATL15436.691ENSMALG00000008131patl25236.691Monopterus_albus
ENSFALG00000012150PATL19981.014MGP_CAROLIEiJ_G0022739Patl19980.884Mus_caroli
ENSFALG00000012150PATL19980.884ENSMUSG00000046139Patl19980.754Mus_musculus
ENSFALG00000012150PATL19981.014MGP_PahariEiJ_G0014233Patl19980.884Mus_pahari
ENSFALG00000012150PATL19981.014MGP_SPRETEiJ_G0023652Patl19980.884Mus_spretus
ENSFALG00000012150PATL19980.729ENSMPUG00000014607PATL19980.469Mustela_putorius_furo
ENSFALG00000012150PATL19976.732ENSMLUG00000011169PATL19978.068Myotis_lucifugus
ENSFALG00000012150PATL19978.329ENSNGAG00000003682Patl19979.531Nannospalax_galili
ENSFALG00000012150PATL15537.324ENSNBRG00000011745patl25936.941Neolamprologus_brichardi
ENSFALG00000012150PATL15745.665ENSNBRG00000015372patl17445.665Neolamprologus_brichardi
ENSFALG00000012150PATL19976.517ENSNLEG00000013081PATL19977.602Nomascus_leucogenys
ENSFALG00000012150PATL15436.893ENSNLEG00000005673PATL27336.893Nomascus_leucogenys
ENSFALG00000012150PATL16790.909ENSMEUG00000009391PATL18982.581Notamacropus_eugenii
ENSFALG00000012150PATL16883.879ENSOPRG00000007963PATL18084.131Ochotona_princeps
ENSFALG00000012150PATL17380.080ENSODEG00000001792PATL19980.478Octodon_degus
ENSFALG00000012150PATL16164.286ENSONIG00000004170patl19948.119Oreochromis_niloticus
ENSFALG00000012150PATL16236.232ENSONIG00000011519patl25437.650Oreochromis_niloticus
ENSFALG00000012150PATL15287.437ENSOANG00000011117-9787.437Ornithorhynchus_anatinus
ENSFALG00000012150PATL15536.806ENSOANG00000001538-8837.619Ornithorhynchus_anatinus
ENSFALG00000012150PATL19979.373ENSOCUG00000002156PATL19980.443Oryctolagus_cuniculus
ENSFALG00000012150PATL15236.432ENSOCUG00000006339PATL27436.683Oryctolagus_cuniculus
ENSFALG00000012150PATL16234.728ENSORLG00000005780patl25635.831Oryzias_latipes
ENSFALG00000012150PATL16433.665ENSORLG00020016506patl25435.915Oryzias_latipes_hni
ENSFALG00000012150PATL16234.728ENSORLG00015014500patl25635.831Oryzias_latipes_hsok
ENSFALG00000012150PATL15436.124ENSOMEG00000021628patl25736.124Oryzias_melastigma
ENSFALG00000012150PATL19979.765ENSOGAG00000004351PATL19980.834Otolemur_garnettii
ENSFALG00000012150PATL15436.253ENSOGAG00000004709PATL27236.779Otolemur_garnettii
ENSFALG00000012150PATL19978.368ENSOARG00000012005PATL19679.948Ovis_aries
ENSFALG00000012150PATL16136.170ENSOARG00000003762PATL27237.624Ovis_aries
ENSFALG00000012150PATL15437.136ENSPPAG00000007221PATL27137.046Pan_paniscus
ENSFALG00000012150PATL19979.504ENSPPAG00000034275PATL19980.574Pan_paniscus
ENSFALG00000012150PATL19979.765ENSPPRG00000020639PATL110080.157Panthera_pardus
ENSFALG00000012150PATL15436.165ENSPPRG00000004279PATL27336.691Panthera_pardus
ENSFALG00000012150PATL15436.408ENSPTIG00000018964PATL27337.019Panthera_tigris_altaica
ENSFALG00000012150PATL19979.661ENSPTIG00000019298PATL19980.052Panthera_tigris_altaica
ENSFALG00000012150PATL19972.763ENSPTRG00000003697PATL19973.850Pan_troglodytes
ENSFALG00000012150PATL15436.893ENSPTRG00000041536PATL27136.804Pan_troglodytes
ENSFALG00000012150PATL19979.504ENSPANG00000035620PATL19980.574Papio_anubis
ENSFALG00000012150PATL19647.601ENSPKIG00000016224patl19949.138Paramormyrops_kingsleyae
ENSFALG00000012150PATL15337.740ENSPKIG00000016887patl25437.857Paramormyrops_kingsleyae
ENSFALG00000012150PATL15436.320ENSPSIG00000017690PATL29536.543Pelodiscus_sinensis
ENSFALG00000012150PATL19985.359ENSPSIG00000016206PATL19585.229Pelodiscus_sinensis
ENSFALG00000012150PATL15456.145ENSPMGG00000002644patl19947.037Periophthalmus_magnuspinnatus
ENSFALG00000012150PATL16135.417ENSPMGG00000014550patl26236.715Periophthalmus_magnuspinnatus
ENSFALG00000012150PATL16134.395ENSPEMG00000016509Patl27036.761Peromyscus_maniculatus_bairdii
ENSFALG00000012150PATL19980.884ENSPEMG00000014215Patl19980.884Peromyscus_maniculatus_bairdii
ENSFALG00000012150PATL19982.853ENSPCIG00000010852PATL19983.377Phascolarctos_cinereus
ENSFALG00000012150PATL15836.526ENSPCIG00000018256PATL27637.624Phascolarctos_cinereus
ENSFALG00000012150PATL19946.108ENSPFOG00000007768patl19947.212Poecilia_formosa
ENSFALG00000012150PATL15538.333ENSPFOG00000007305patl25538.333Poecilia_formosa
ENSFALG00000012150PATL15538.333ENSPLAG00000020713patl25538.333Poecilia_latipinna
ENSFALG00000012150PATL17255.687ENSPLAG00000018465patl19946.644Poecilia_latipinna
ENSFALG00000012150PATL19949.849ENSPMEG00000006555patl19946.536Poecilia_mexicana
ENSFALG00000012150PATL15538.333ENSPMEG00000018942patl25538.333Poecilia_mexicana
ENSFALG00000012150PATL18849.132ENSPREG00000003874patl17050.342Poecilia_reticulata
ENSFALG00000012150PATL19979.896ENSPPYG00000003230PATL19980.965Pongo_abelii
ENSFALG00000012150PATL15438.257ENSPCOG00000000295PATL29938.904Propithecus_coquereli
ENSFALG00000012150PATL19979.504ENSPCOG00000020770PATL19980.574Propithecus_coquereli
ENSFALG00000012150PATL18578.626ENSPVAG00000015239PATL19978.811Pteropus_vampyrus
ENSFALG00000012150PATL17854.407ENSPNYG00000018936patl19954.381Pundamilia_nyererei
ENSFALG00000012150PATL16235.685ENSPNYG00000017381patl26336.471Pundamilia_nyererei
ENSFALG00000012150PATL19645.590ENSPNAG00000017907patl19846.506Pygocentrus_nattereri
ENSFALG00000012150PATL16336.179ENSPNAG00000002315patl25738.462Pygocentrus_nattereri
ENSFALG00000012150PATL19980.494ENSRNOG00000021052Patl19980.364Rattus_norvegicus
ENSFALG00000012150PATL19970.787ENSRBIG00000032263PATL19970.787Rhinopithecus_bieti
ENSFALG00000012150PATL19979.634ENSRROG00000032861PATL19980.704Rhinopithecus_roxellana
ENSFALG00000012150PATL19979.504ENSSBOG00000025195PATL19980.574Saimiri_boliviensis_boliviensis
ENSFALG00000012150PATL19983.095ENSSHAG00000004309PATL19983.745Sarcophilus_harrisii
ENSFALG00000012150PATL19645.295ENSSFOG00015009614patl19947.975Scleropages_formosus
ENSFALG00000012150PATL18734.012ENSSFOG00015000720patl29532.229Scleropages_formosus
ENSFALG00000012150PATL17033.517ENSSMAG00000017262patl26336.585Scophthalmus_maximus
ENSFALG00000012150PATL19261.017ENSSMAG00000009482patl18153.247Scophthalmus_maximus
ENSFALG00000012150PATL16335.417ENSSDUG00000022927patl25437.410Seriola_dumerili
ENSFALG00000012150PATL19166.071ENSSDUG00000005362patl17959.155Seriola_dumerili
ENSFALG00000012150PATL19166.071ENSSLDG00000019146patl17959.155Seriola_lalandi_dorsalis
ENSFALG00000012150PATL16136.864ENSSLDG00000017922patl25938.499Seriola_lalandi_dorsalis
ENSFALG00000012150PATL15138.677ENSSARG00000009047PATL27638.889Sorex_araneus
ENSFALG00000012150PATL17982.231ENSSARG00000009600PATL18083.774Sorex_araneus
ENSFALG00000012150PATL19984.142ENSSPUG00000009453PATL19984.797Sphenodon_punctatus
ENSFALG00000012150PATL16834.528ENSSPAG00000004784patl26137.440Stegastes_partitus
ENSFALG00000012150PATL15454.940ENSSPAG00000003187patl19946.875Stegastes_partitus
ENSFALG00000012150PATL19979.427ENSSSCG00000013124PATL19980.469Sus_scrofa
ENSFALG00000012150PATL19997.513ENSTGUG00000006222PATL110097.513Taeniopygia_guttata
ENSFALG00000012150PATL15137.374ENSTGUG00000004619-9638.481Taeniopygia_guttata
ENSFALG00000012150PATL16235.084ENSTRUG00000005647patl25636.691Takifugu_rubripes
ENSFALG00000012150PATL19162.500ENSTRUG00000000709patl19844.969Takifugu_rubripes
ENSFALG00000012150PATL19074.126ENSTBEG00000000796PATL19076.047Tupaia_belangeri
ENSFALG00000012150PATL17286.146ENSTTRG00000009389PATL18486.146Tursiops_truncatus
ENSFALG00000012150PATL15435.766ENSUAMG00000018533PATL27136.298Ursus_americanus
ENSFALG00000012150PATL15436.253ENSUMAG00000007738PATL27136.779Ursus_maritimus
ENSFALG00000012150PATL19979.346ENSUMAG00000018634PATL19981.322Ursus_maritimus
ENSFALG00000012150PATL16585.714ENSVPAG00000009224PATL17685.714Vicugna_pacos
ENSFALG00000012150PATL19980.208ENSVVUG00000016668PATL19981.466Vulpes_vulpes
ENSFALG00000012150PATL15836.623ENSVVUG00000011576PATL28835.098Vulpes_vulpes
ENSFALG00000012150PATL16261.905ENSXCOG00000010808patl19961.905Xiphophorus_couchianus
ENSFALG00000012150PATL19266.071ENSXMAG00000013834patl18652.000Xiphophorus_maculatus
ENSFALG00000012150PATL15538.571ENSXMAG00000018464patl25538.571Xiphophorus_maculatus

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