EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000012195 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 110662 bases
Position: chrJH603173.1:18291369-18402030
Accession: 101812808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000012745	Ago_hook	PF10427.9	1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000012795	TNRC6B-201	5536	XM_005039713	ENSFALP00000012745	1683 (aa)	XP_005039770	U3KCJ1

Gene Model

Click here to download ENSFALG00000012195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000012195's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000012195	TNRC6B	84	37.898	ENSFALG00000000848	TNRC6C	93	35.860
ENSFALG00000012195	TNRC6B	99	37.267	ENSFALG00000003757	TNRC6A	93	37.566

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000012195	TNRC6B	100	85.111	ENSG00000100354	TNRC6B	99	88.666	Homo_sapiens
ENSFALG00000012195	TNRC6B	100	84.712	ENSAMEG00000011025	TNRC6B	95	84.313	Ailuropoda_melanoleuca
ENSFALG00000012195	TNRC6B	100	92.870	ENSAPLG00000009347	TNRC6B	97	93.642	Anas_platyrhynchos
ENSFALG00000012195	TNRC6B	100	75.162	ENSACAG00000007281	TNRC6B	95	75.456	Anolis_carolinensis
ENSFALG00000012195	TNRC6B	100	88.679	ENSANAG00000035042	TNRC6B	96	88.915	Aotus_nancymaae
ENSFALG00000012195	TNRC6B	68	48.299	ENSAMXG00000008707	tnrc6b	83	45.295	Astyanax_mexicanus
ENSFALG00000012195	TNRC6B	100	87.345	ENSBTAG00000021076	TNRC6B	95	87.581	Bos_taurus
ENSFALG00000012195	TNRC6B	94	96.067	ENSCJAG00000002732	TNRC6B	99	95.787	Callithrix_jacchus
ENSFALG00000012195	TNRC6B	96	88.610	ENSCAFG00000001255	TNRC6B	95	85.588	Canis_familiaris
ENSFALG00000012195	TNRC6B	100	88.412	ENSCAFG00020002189	TNRC6B	96	86.824	Canis_lupus_dingo
ENSFALG00000012195	TNRC6B	100	87.169	ENSCHIG00000003491	TNRC6B	96	87.581	Capra_hircus
ENSFALG00000012195	TNRC6B	100	88.725	ENSTSYG00000011836	TNRC6B	96	88.784	Carlito_syrichta
ENSFALG00000012195	TNRC6B	100	87.368	ENSCPOG00000005705	TNRC6B	95	87.485	Cavia_porcellus
ENSFALG00000012195	TNRC6B	100	87.279	ENSCCAG00000019912	TNRC6B	95	87.574	Cebus_capucinus
ENSFALG00000012195	TNRC6B	100	88.732	ENSCATG00000029291	TNRC6B	97	88.791	Cercocebus_atys
ENSFALG00000012195	TNRC6B	100	87.882	ENSCLAG00000016942	TNRC6B	94	88.059	Chinchilla_lanigera
ENSFALG00000012195	TNRC6B	100	84.838	ENSCSAG00000006021	TNRC6B	95	84.838	Chlorocebus_sabaeus
ENSFALG00000012195	TNRC6B	92	89.795	ENSCPBG00000022932	TNRC6B	96	90.106	Chrysemys_picta_bellii
ENSFALG00000012195	TNRC6B	100	88.555	ENSCANG00000030776	TNRC6B	96	88.614	Colobus_angolensis_palliatus
ENSFALG00000012195	TNRC6B	96	86.503	ENSCGRG00001020166	Tnrc6b	93	86.626	Cricetulus_griseus_chok1gshd
ENSFALG00000012195	TNRC6B	100	86.572	ENSCGRG00000016696	Tnrc6b	95	86.631	Cricetulus_griseus_crigri
ENSFALG00000012195	TNRC6B	100	87.397	ENSDNOG00000012744	TNRC6B	94	87.809	Dasypus_novemcinctus
ENSFALG00000012195	TNRC6B	100	87.854	ENSDORG00000003386	Tnrc6b	93	88.090	Dipodomys_ordii
ENSFALG00000012195	TNRC6B	100	76.914	ENSETEG00000006570	TNRC6B	95	77.974	Echinops_telfairi
ENSFALG00000012195	TNRC6B	100	88.699	ENSEASG00005005306	TNRC6B	96	88.935	Equus_asinus_asinus
ENSFALG00000012195	TNRC6B	96	95.025	ENSECAG00000009759	TNRC6B	96	94.527	Equus_caballus
ENSFALG00000012195	TNRC6B	58	93.066	ENSEEUG00000008690	-	57	92.701	Erinaceus_europaeus
ENSFALG00000012195	TNRC6B	100	88.550	ENSFCAG00000004791	TNRC6B	93	88.784	Felis_catus
ENSFALG00000012195	TNRC6B	100	87.640	ENSFDAG00000021368	TNRC6B	93	87.758	Fukomys_damarensis
ENSFALG00000012195	TNRC6B	100	97.387	ENSGALG00000012050	TNRC6B	93	97.387	Gallus_gallus
ENSFALG00000012195	TNRC6B	100	91.898	ENSGAGG00000025188	TNRC6B	94	91.898	Gopherus_agassizii
ENSFALG00000012195	TNRC6B	100	88.915	ENSGGOG00000008444	TNRC6B	95	88.915	Gorilla_gorilla
ENSFALG00000012195	TNRC6B	100	87.515	ENSHGLG00000009306	TNRC6B	94	87.456	Heterocephalus_glaber_female
ENSFALG00000012195	TNRC6B	100	87.729	ENSHGLG00100018108	TNRC6B	95	87.670	Heterocephalus_glaber_male
ENSFALG00000012195	TNRC6B	80	44.066	ENSIPUG00000001515	tnrc6b	90	45.705	Ictalurus_punctatus
ENSFALG00000012195	TNRC6B	100	87.795	ENSSTOG00000008927	TNRC6B	93	88.031	Ictidomys_tridecemlineatus
ENSFALG00000012195	TNRC6B	100	87.080	ENSJJAG00000015779	Tnrc6b	93	87.139	Jaculus_jaculus
ENSFALG00000012195	TNRC6B	100	62.377	ENSLACG00000000628	-	95	61.858	Latimeria_chalumnae
ENSFALG00000012195	TNRC6B	81	88.397	ENSLAFG00000014473	TNRC6B	100	90.394	Loxodonta_africana
ENSFALG00000012195	TNRC6B	100	88.791	ENSMFAG00000003862	TNRC6B	97	88.850	Macaca_fascicularis
ENSFALG00000012195	TNRC6B	100	88.791	ENSMMUG00000021345	TNRC6B	93	88.691	Macaca_mulatta
ENSFALG00000012195	TNRC6B	100	88.732	ENSMNEG00000042745	TNRC6B	96	88.791	Macaca_nemestrina
ENSFALG00000012195	TNRC6B	100	88.791	ENSMLEG00000041780	TNRC6B	97	88.850	Mandrillus_leucophaeus
ENSFALG00000012195	TNRC6B	100	92.374	ENSMGAG00000012333	TNRC6B	95	90.893	Meleagris_gallopavo
ENSFALG00000012195	TNRC6B	100	86.969	ENSMAUG00000016123	Tnrc6b	93	87.028	Mesocricetus_auratus
ENSFALG00000012195	TNRC6B	100	88.142	ENSMICG00000014056	TNRC6B	96	88.319	Microcebus_murinus
ENSFALG00000012195	TNRC6B	96	92.537	ENSMOCG00000020334	Tnrc6b	93	92.040	Microtus_ochrogaster
ENSFALG00000012195	TNRC6B	100	87.272	MGP_CAROLIEiJ_G0020043	Tnrc6b	93	87.095	Mus_caroli
ENSFALG00000012195	TNRC6B	100	87.390	ENSMUSG00000047888	Tnrc6b	99	81.729	Mus_musculus
ENSFALG00000012195	TNRC6B	100	87.272	MGP_PahariEiJ_G0020045	Tnrc6b	93	87.095	Mus_pahari
ENSFALG00000012195	TNRC6B	100	87.448	MGP_SPRETEiJ_G0020941	Tnrc6b	93	87.272	Mus_spretus
ENSFALG00000012195	TNRC6B	100	91.445	ENSMPUG00000016442	TNRC6B	96	77.428	Mustela_putorius_furo
ENSFALG00000012195	TNRC6B	100	84.400	ENSMLUG00000008765	TNRC6B	95	84.000	Myotis_lucifugus
ENSFALG00000012195	TNRC6B	100	87.662	ENSNGAG00000021294	Tnrc6b	93	87.544	Nannospalax_galili
ENSFALG00000012195	TNRC6B	89	87.526	ENSNLEG00000015311	TNRC6B	88	91.371	Nomascus_leucogenys
ENSFALG00000012195	TNRC6B	90	83.226	ENSOPRG00000012054	TNRC6B	83	83.226	Ochotona_princeps
ENSFALG00000012195	TNRC6B	100	87.831	ENSODEG00000013146	TNRC6B	93	88.007	Octodon_degus
ENSFALG00000012195	TNRC6B	69	43.475	ENSONIG00000019679	-	53	49.095	Oreochromis_niloticus
ENSFALG00000012195	TNRC6B	100	87.655	ENSOCUG00000016128	TNRC6B	93	87.891	Oryctolagus_cuniculus
ENSFALG00000012195	TNRC6B	100	84.633	ENSOGAG00000011096	TNRC6B	95	83.893	Otolemur_garnettii
ENSFALG00000012195	TNRC6B	100	87.324	ENSOARG00000017238	TNRC6B	93	87.559	Ovis_aries
ENSFALG00000012195	TNRC6B	100	88.856	ENSPPAG00000028514	TNRC6B	96	88.856	Pan_paniscus
ENSFALG00000012195	TNRC6B	100	84.769	ENSPPRG00000017741	TNRC6B	95	85.908	Panthera_pardus
ENSFALG00000012195	TNRC6B	100	82.516	ENSPTIG00000022064	TNRC6B	95	83.166	Panthera_tigris_altaica
ENSFALG00000012195	TNRC6B	100	89.027	ENSPTRG00000047826	TNRC6B	97	89.027	Pan_troglodytes
ENSFALG00000012195	TNRC6B	100	80.685	ENSPANG00000009271	TNRC6B	93	93.939	Papio_anubis
ENSFALG00000012195	TNRC6B	100	91.834	ENSPSIG00000005318	TNRC6B	95	92.130	Pelodiscus_sinensis
ENSFALG00000012195	TNRC6B	100	86.353	ENSPEMG00000011403	Tnrc6b	93	86.706	Peromyscus_maniculatus_bairdii
ENSFALG00000012195	TNRC6B	100	84.950	ENSPCIG00000020347	TNRC6B	96	85.068	Phascolarctos_cinereus
ENSFALG00000012195	TNRC6B	99	39.572	ENSPFOG00000006033	-	97	39.664	Poecilia_formosa
ENSFALG00000012195	TNRC6B	54	47.714	ENSPLAG00000001418	-	52	48.156	Poecilia_latipinna
ENSFALG00000012195	TNRC6B	100	83.843	ENSPPYG00000011849	TNRC6B	100	81.631	Pongo_abelii
ENSFALG00000012195	TNRC6B	73	85.000	ENSPCAG00000008739	TNRC6B	71	85.000	Procavia_capensis
ENSFALG00000012195	TNRC6B	100	88.260	ENSPCOG00000020790	TNRC6B	96	88.378	Propithecus_coquereli
ENSFALG00000012195	TNRC6B	93	87.714	ENSPVAG00000004975	TNRC6B	87	87.714	Pteropus_vampyrus
ENSFALG00000012195	TNRC6B	74	44.242	ENSPNAG00000011713	tnrc6b	81	46.318	Pygocentrus_nattereri
ENSFALG00000012195	TNRC6B	100	86.995	ENSRNOG00000024907	Tnrc6b	93	86.643	Rattus_norvegicus
ENSFALG00000012195	TNRC6B	100	88.496	ENSRBIG00000035576	TNRC6B	96	88.555	Rhinopithecus_bieti
ENSFALG00000012195	TNRC6B	100	88.437	ENSRROG00000031135	TNRC6B	96	88.496	Rhinopithecus_roxellana
ENSFALG00000012195	TNRC6B	100	84.607	ENSSBOG00000029743	TNRC6B	91	91.253	Saimiri_boliviensis_boliviensis
ENSFALG00000012195	TNRC6B	100	80.660	ENSSHAG00000009692	TNRC6B	95	80.375	Sarcophilus_harrisii
ENSFALG00000012195	TNRC6B	67	81.087	ENSSARG00000007971	-	67	80.659	Sorex_araneus
ENSFALG00000012195	TNRC6B	96	87.104	ENSSPUG00000010801	TNRC6B	100	86.567	Sphenodon_punctatus
ENSFALG00000012195	TNRC6B	100	88.384	ENSSSCG00000000078	TNRC6B	95	88.620	Sus_scrofa
ENSFALG00000012195	TNRC6B	93	94.710	ENSTGUG00000010138	-	95	95.092	Taeniopygia_guttata
ENSFALG00000012195	TNRC6B	100	82.478	ENSTTRG00000011465	TNRC6B	93	83.009	Tursiops_truncatus
ENSFALG00000012195	TNRC6B	100	88.863	ENSUAMG00000007174	TNRC6B	95	89.098	Ursus_americanus
ENSFALG00000012195	TNRC6B	100	88.863	ENSUMAG00000014336	TNRC6B	100	89.098	Ursus_maritimus
ENSFALG00000012195	TNRC6B	67	83.422	ENSVPAG00000001467	TNRC6B	66	83.422	Vicugna_pacos
ENSFALG00000012195	TNRC6B	100	88.647	ENSVVUG00000007064	TNRC6B	95	88.647	Vulpes_vulpes