EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000012288 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX3
Alias: FOX-3|HRNBP3|NeuN
Full Name: RNA binding fox-1 homolog 3
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 10992 bases
Position: chrJH603331.1:506221-517212
Accession: 27097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000012843	Fox-1_C	PF12414.8	1.2e-21	1	1
ENSFALP00000012843	RRM_1	PF00076.22	1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000012893	RBFOX3-201	1212	-	ENSFALP00000012843	403 (aa)	-	U3KCT9

Gene Model

Click here to download ENSFALG00000012288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000012288's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000012288	RBFOX3	81	66.364	ENSFALG00000004027	RBFOX1	91	65.273
ENSFALG00000012288	RBFOX3	98	55.288	ENSFALG00000013111	RBFOX2	96	53.125

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000012288	RBFOX3	81	75.684	ENSG00000167281	RBFOX3	100	71.692	Homo_sapiens
ENSFALG00000012288	RBFOX3	99	64.356	ENSAPOG00000021630	rbfox3b	89	68.156	Acanthochromis_polyacanthus
ENSFALG00000012288	RBFOX3	98	49.877	ENSAPOG00000015658	-	88	51.206	Acanthochromis_polyacanthus
ENSFALG00000012288	RBFOX3	99	71.675	ENSAMEG00000014170	RBFOX3	100	71.429	Ailuropoda_melanoleuca
ENSFALG00000012288	RBFOX3	85	63.920	ENSACIG00000010817	rbfox3b	94	61.934	Amphilophus_citrinellus
ENSFALG00000012288	RBFOX3	84	58.601	ENSACIG00000003768	-	64	73.913	Amphilophus_citrinellus
ENSFALG00000012288	RBFOX3	89	68.595	ENSAOCG00000012358	rbfox3b	90	68.132	Amphiprion_ocellaris
ENSFALG00000012288	RBFOX3	97	59.288	ENSAOCG00000010786	-	90	58.838	Amphiprion_ocellaris
ENSFALG00000012288	RBFOX3	98	57.627	ENSAPEG00000015891	-	93	59.045	Amphiprion_percula
ENSFALG00000012288	RBFOX3	88	62.745	ENSAPEG00000019081	rbfox3b	87	60.894	Amphiprion_percula
ENSFALG00000012288	RBFOX3	81	62.651	ENSATEG00000023101	-	92	62.048	Anabas_testudineus
ENSFALG00000012288	RBFOX3	85	62.735	ENSATEG00000019945	rbfox3b	95	63.905	Anabas_testudineus
ENSFALG00000012288	RBFOX3	88	74.860	ENSACAG00000016093	RBFOX3	91	75.419	Anolis_carolinensis
ENSFALG00000012288	RBFOX3	81	74.468	ENSANAG00000023457	RBFOX3	95	74.468	Aotus_nancymaae
ENSFALG00000012288	RBFOX3	88	66.295	ENSACLG00000025552	-	89	65.738	Astatotilapia_calliptera
ENSFALG00000012288	RBFOX3	99	63.861	ENSACLG00000020011	rbfox3b	95	67.674	Astatotilapia_calliptera
ENSFALG00000012288	RBFOX3	89	67.663	ENSAMXG00000037246	rbfox3a	98	67.590	Astyanax_mexicanus
ENSFALG00000012288	RBFOX3	88	64.624	ENSAMXG00000042841	rbfox3b	93	61.944	Astyanax_mexicanus
ENSFALG00000012288	RBFOX3	75	71.711	ENSBTAG00000006280	RBFOX3	95	61.972	Bos_taurus
ENSFALG00000012288	RBFOX3	84	68.588	ENSCJAG00000009563	RBFOX3	96	70.423	Callithrix_jacchus
ENSFALG00000012288	RBFOX3	77	68.810	ENSCAFG00000005547	RBFOX3	100	68.810	Canis_familiaris
ENSFALG00000012288	RBFOX3	92	63.070	ENSCAFG00020008126	RBFOX3	96	66.667	Canis_lupus_dingo
ENSFALG00000012288	RBFOX3	92	61.871	ENSCHIG00000009124	RBFOX3	96	65.404	Capra_hircus
ENSFALG00000012288	RBFOX3	81	64.721	ENSTSYG00000029617	RBFOX3	96	68.820	Carlito_syrichta
ENSFALG00000012288	RBFOX3	92	62.143	ENSCPOG00000021703	RBFOX3	96	69.832	Cavia_porcellus
ENSFALG00000012288	RBFOX3	81	74.468	ENSCCAG00000028450	RBFOX3	95	74.468	Cebus_capucinus
ENSFALG00000012288	RBFOX3	81	75.684	ENSCATG00000018349	RBFOX3	95	75.684	Cercocebus_atys
ENSFALG00000012288	RBFOX3	92	62.201	ENSCLAG00000006449	RBFOX3	96	68.539	Chinchilla_lanigera
ENSFALG00000012288	RBFOX3	81	75.684	ENSCSAG00000002355	RBFOX3	95	75.684	Chlorocebus_sabaeus
ENSFALG00000012288	RBFOX3	98	71.899	ENSCPBG00000010904	RBFOX3	98	76.836	Chrysemys_picta_bellii
ENSFALG00000012288	RBFOX3	81	75.684	ENSCANG00000043120	RBFOX3	95	75.684	Colobus_angolensis_palliatus
ENSFALG00000012288	RBFOX3	92	57.041	ENSCGRG00001019476	Rbfox3	96	68.555	Cricetulus_griseus_chok1gshd
ENSFALG00000012288	RBFOX3	92	57.041	ENSCGRG00000003268	Rbfox3	96	68.555	Cricetulus_griseus_crigri
ENSFALG00000012288	RBFOX3	99	58.495	ENSCSEG00000015567	RBFOX3	98	57.855	Cynoglossus_semilaevis
ENSFALG00000012288	RBFOX3	88	55.068	ENSCSEG00000020606	RBFOX3	87	54.192	Cynoglossus_semilaevis
ENSFALG00000012288	RBFOX3	89	68.595	ENSCVAG00000006882	rbfox3b	90	68.132	Cyprinodon_variegatus
ENSFALG00000012288	RBFOX3	89	66.848	ENSDARG00000010083	rbfox3a	99	66.759	Danio_rerio
ENSFALG00000012288	RBFOX3	99	50.374	ENSDARG00000074310	rbfox3b	97	69.458	Danio_rerio
ENSFALG00000012288	RBFOX3	71	65.495	ENSDNOG00000039391	RBFOX3	81	65.495	Dasypus_novemcinctus
ENSFALG00000012288	RBFOX3	92	53.606	ENSDORG00000005352	Rbfox3	95	56.780	Dipodomys_ordii
ENSFALG00000012288	RBFOX3	98	54.126	ENSEBUG00000002129	RBFOX3	99	54.369	Eptatretus_burgeri
ENSFALG00000012288	RBFOX3	77	47.222	ENSEBUG00000013559	RBFOX3	71	47.917	Eptatretus_burgeri
ENSFALG00000012288	RBFOX3	81	74.622	ENSEASG00005005059	RBFOX3	95	73.414	Equus_asinus_asinus
ENSFALG00000012288	RBFOX3	81	74.320	ENSECAG00000023811	RBFOX3	95	73.112	Equus_caballus
ENSFALG00000012288	RBFOX3	74	86.458	ENSEEUG00000013974	RBFOX3	73	86.458	Erinaceus_europaeus
ENSFALG00000012288	RBFOX3	99	63.457	ENSELUG00000017963	rbfox3b	90	65.110	Esox_lucius
ENSFALG00000012288	RBFOX3	88	75.910	ENSFCAG00000002555	RBFOX3	95	74.772	Felis_catus
ENSFALG00000012288	RBFOX3	92	61.250	ENSFDAG00000007489	RBFOX3	96	64.246	Fukomys_damarensis
ENSFALG00000012288	RBFOX3	85	59.710	ENSFHEG00000008550	rbfox3b	95	56.495	Fundulus_heteroclitus
ENSFALG00000012288	RBFOX3	76	66.029	ENSGMOG00000019304	-	63	86.029	Gadus_morhua
ENSFALG00000012288	RBFOX3	91	78.202	ENSGALG00000032889	RBFOX3	91	79.494	Gallus_gallus
ENSFALG00000012288	RBFOX3	88	61.813	ENSGAFG00000005025	rbfox3b	86	66.465	Gambusia_affinis
ENSFALG00000012288	RBFOX3	92	58.122	ENSGACG00000002138	-	96	59.194	Gasterosteus_aculeatus
ENSFALG00000012288	RBFOX3	98	71.717	ENSGAGG00000020025	RBFOX3	95	75.610	Gopherus_agassizii
ENSFALG00000012288	RBFOX3	81	75.684	ENSGGOG00000012546	RBFOX3	95	75.684	Gorilla_gorilla
ENSFALG00000012288	RBFOX3	99	63.861	ENSHBUG00000018099	rbfox3b	90	67.857	Haplochromis_burtoni
ENSFALG00000012288	RBFOX3	99	61.728	ENSHBUG00000023098	-	99	61.235	Haplochromis_burtoni
ENSFALG00000012288	RBFOX3	92	61.611	ENSHGLG00000008679	RBFOX3	96	69.167	Heterocephalus_glaber_female
ENSFALG00000012288	RBFOX3	74	88.947	ENSHGLG00100014739	RBFOX3	96	61.832	Heterocephalus_glaber_male
ENSFALG00000012288	RBFOX3	85	56.447	ENSHCOG00000001863	RBFOX3	87	55.490	Hippocampus_comes
ENSFALG00000012288	RBFOX3	83	62.090	ENSHCOG00000007444	RBFOX3	78	61.905	Hippocampus_comes
ENSFALG00000012288	RBFOX3	66	76.214	ENSIPUG00000021966	rbfox3b	81	75.115	Ictalurus_punctatus
ENSFALG00000012288	RBFOX3	99	60.880	ENSIPUG00000012010	rbfox3a	98	66.482	Ictalurus_punctatus
ENSFALG00000012288	RBFOX3	92	64.075	ENSSTOG00000026817	RBFOX3	95	66.867	Ictidomys_tridecemlineatus
ENSFALG00000012288	RBFOX3	92	62.590	ENSJJAG00000014167	Rbfox3	96	71.549	Jaculus_jaculus
ENSFALG00000012288	RBFOX3	98	61.235	ENSKMAG00000006726	rbfox3b	90	68.132	Kryptolebias_marmoratus
ENSFALG00000012288	RBFOX3	98	64.070	ENSLBEG00000004030	rbfox3b	89	67.877	Labrus_bergylta
ENSFALG00000012288	RBFOX3	89	67.671	ENSLBEG00000022508	-	89	67.131	Labrus_bergylta
ENSFALG00000012288	RBFOX3	98	65.848	ENSLACG00000018409	-	100	67.322	Latimeria_chalumnae
ENSFALG00000012288	RBFOX3	98	66.093	ENSLOCG00000012267	rbfox3a	98	71.788	Lepisosteus_oculatus
ENSFALG00000012288	RBFOX3	98	70.647	ENSLAFG00000016623	RBFOX3	98	69.363	Loxodonta_africana
ENSFALG00000012288	RBFOX3	92	58.513	ENSMFAG00000002247	RBFOX3	96	72.113	Macaca_fascicularis
ENSFALG00000012288	RBFOX3	81	75.684	ENSMMUG00000023028	RBFOX3	95	75.684	Macaca_mulatta
ENSFALG00000012288	RBFOX3	81	75.380	ENSMNEG00000041147	RBFOX3	95	75.380	Macaca_nemestrina
ENSFALG00000012288	RBFOX3	81	75.684	ENSMLEG00000025686	RBFOX3	95	75.684	Mandrillus_leucophaeus
ENSFALG00000012288	RBFOX3	98	60.750	ENSMAMG00000020600	-	99	58.561	Mastacembelus_armatus
ENSFALG00000012288	RBFOX3	85	63.143	ENSMAMG00000019810	rbfox3b	94	60.976	Mastacembelus_armatus
ENSFALG00000012288	RBFOX3	99	63.861	ENSMZEG00005000781	rbfox3b	89	67.877	Maylandia_zebra
ENSFALG00000012288	RBFOX3	83	56.395	ENSMZEG00005003055	-	76	55.963	Maylandia_zebra
ENSFALG00000012288	RBFOX3	64	84.291	ENSMGAG00000005600	RBFOX3	97	84.291	Meleagris_gallopavo
ENSFALG00000012288	RBFOX3	92	61.575	ENSMAUG00000013543	Rbfox3	96	67.787	Mesocricetus_auratus
ENSFALG00000012288	RBFOX3	87	74.221	ENSMICG00000014898	RBFOX3	96	74.164	Microcebus_murinus
ENSFALG00000012288	RBFOX3	92	60.287	ENSMOCG00000015373	Rbfox3	96	68.258	Microtus_ochrogaster
ENSFALG00000012288	RBFOX3	99	60.244	ENSMMOG00000020193	rbfox3b	99	59.951	Mola_mola
ENSFALG00000012288	RBFOX3	88	75.843	ENSMODG00000002089	RBFOX3	91	75.562	Monodelphis_domestica
ENSFALG00000012288	RBFOX3	89	67.493	ENSMALG00000020407	rbfox3b	90	67.033	Monopterus_albus
ENSFALG00000012288	RBFOX3	99	61.787	ENSMALG00000018270	-	89	66.852	Monopterus_albus
ENSFALG00000012288	RBFOX3	92	67.925	MGP_CAROLIEiJ_G0017487	Rbfox3	91	89.610	Mus_caroli
ENSFALG00000012288	RBFOX3	92	67.925	ENSMUSG00000025576	Rbfox3	91	88.961	Mus_musculus
ENSFALG00000012288	RBFOX3	92	68.280	MGP_PahariEiJ_G0018614	Rbfox3	91	89.610	Mus_pahari
ENSFALG00000012288	RBFOX3	92	68.194	MGP_SPRETEiJ_G0018331	Rbfox3	91	89.610	Mus_spretus
ENSFALG00000012288	RBFOX3	98	71.429	ENSMPUG00000012319	RBFOX3	98	71.182	Mustela_putorius_furo
ENSFALG00000012288	RBFOX3	92	60.048	ENSNGAG00000018006	Rbfox3	96	68.539	Nannospalax_galili
ENSFALG00000012288	RBFOX3	89	67.493	ENSNBRG00000010102	rbfox3b	73	92.593	Neolamprologus_brichardi
ENSFALG00000012288	RBFOX3	89	60.163	ENSNBRG00000022885	-	91	58.402	Neolamprologus_brichardi
ENSFALG00000012288	RBFOX3	53	100.000	ENSNLEG00000000153	-	76	100.000	Nomascus_leucogenys
ENSFALG00000012288	RBFOX3	59	95.745	ENSMEUG00000004218	-	61	96.552	Notamacropus_eugenii
ENSFALG00000012288	RBFOX3	72	87.895	ENSOPRG00000016279	-	79	87.368	Ochotona_princeps
ENSFALG00000012288	RBFOX3	81	74.242	ENSODEG00000009433	RBFOX3	95	73.939	Octodon_degus
ENSFALG00000012288	RBFOX3	95	63.342	ENSONIG00000009549	rbfox3b	90	68.132	Oreochromis_niloticus
ENSFALG00000012288	RBFOX3	91	65.416	ENSONIG00000007282	-	99	65.684	Oreochromis_niloticus
ENSFALG00000012288	RBFOX3	67	66.330	ENSOCUG00000014217	RBFOX3	78	63.973	Oryctolagus_cuniculus
ENSFALG00000012288	RBFOX3	99	64.198	ENSORLG00000000905	rbfox3b	70	67.877	Oryzias_latipes
ENSFALG00000012288	RBFOX3	99	64.198	ENSORLG00020018030	rbfox3b	88	67.877	Oryzias_latipes_hni
ENSFALG00000012288	RBFOX3	99	61.758	ENSORLG00015009200	rbfox3b	90	67.582	Oryzias_latipes_hsok
ENSFALG00000012288	RBFOX3	55	75.309	ENSOMEG00000014677	rbfox3b	64	74.486	Oryzias_melastigma
ENSFALG00000012288	RBFOX3	100	69.630	ENSOGAG00000029595	RBFOX3	99	69.383	Otolemur_garnettii
ENSFALG00000012288	RBFOX3	98	59.850	ENSOARG00000002908	RBFOX3	100	60.149	Ovis_aries
ENSFALG00000012288	RBFOX3	70	71.831	ENSPPAG00000025383	RBFOX3	88	71.831	Pan_paniscus
ENSFALG00000012288	RBFOX3	81	66.757	ENSPPRG00000007819	RBFOX3	96	71.633	Panthera_pardus
ENSFALG00000012288	RBFOX3	81	75.684	ENSPTRG00000009727	RBFOX3	95	75.684	Pan_troglodytes
ENSFALG00000012288	RBFOX3	81	75.684	ENSPANG00000019837	RBFOX3	95	75.684	Papio_anubis
ENSFALG00000012288	RBFOX3	98	52.357	ENSPKIG00000022633	-	92	50.124	Paramormyrops_kingsleyae
ENSFALG00000012288	RBFOX3	99	66.256	ENSPKIG00000010299	rbfox3a	93	61.386	Paramormyrops_kingsleyae
ENSFALG00000012288	RBFOX3	77	65.605	ENSPMGG00000008000	rbfox3b	87	65.924	Periophthalmus_magnuspinnatus
ENSFALG00000012288	RBFOX3	92	59.091	ENSPEMG00000010500	Rbfox3	96	68.820	Peromyscus_maniculatus_bairdii
ENSFALG00000012288	RBFOX3	62	50.000	ENSPMAG00000008689	rbfox3b	99	50.763	Petromyzon_marinus
ENSFALG00000012288	RBFOX3	88	67.990	ENSPCIG00000005766	RBFOX3	97	72.178	Phascolarctos_cinereus
ENSFALG00000012288	RBFOX3	99	64.356	ENSPFOG00000018294	rbfox3b	90	63.951	Poecilia_formosa
ENSFALG00000012288	RBFOX3	78	57.407	ENSPLAG00000000481	rbfox3b	79	56.151	Poecilia_latipinna
ENSFALG00000012288	RBFOX3	85	59.710	ENSPMEG00000022997	rbfox3b	95	56.495	Poecilia_mexicana
ENSFALG00000012288	RBFOX3	90	68.665	ENSPREG00000012886	rbfox3b	93	68.715	Poecilia_reticulata
ENSFALG00000012288	RBFOX3	77	67.524	ENSPPYG00000008704	RBFOX3	82	67.203	Pongo_abelii
ENSFALG00000012288	RBFOX3	81	63.636	ENSPCAG00000001401	RBFOX3	96	67.606	Procavia_capensis
ENSFALG00000012288	RBFOX3	85	67.179	ENSPCOG00000012689	RBFOX3	97	71.549	Propithecus_coquereli
ENSFALG00000012288	RBFOX3	60	84.483	ENSPVAG00000015243	RBFOX3	96	59.384	Pteropus_vampyrus
ENSFALG00000012288	RBFOX3	88	60.167	ENSPNYG00000010414	rbfox3b	73	92.593	Pundamilia_nyererei
ENSFALG00000012288	RBFOX3	93	58.377	ENSPNYG00000009079	-	88	57.181	Pundamilia_nyererei
ENSFALG00000012288	RBFOX3	98	63.275	ENSPNAG00000002889	rbfox3a	89	67.127	Pygocentrus_nattereri
ENSFALG00000012288	RBFOX3	85	50.565	ENSPNAG00000018173	rbfox3b	85	48.936	Pygocentrus_nattereri
ENSFALG00000012288	RBFOX3	81	73.716	ENSRNOG00000003386	Rbfox3	95	72.508	Rattus_norvegicus
ENSFALG00000012288	RBFOX3	88	76.190	ENSRBIG00000040449	RBFOX3	91	75.910	Rhinopithecus_bieti
ENSFALG00000012288	RBFOX3	81	75.684	ENSRROG00000000766	RBFOX3	95	75.684	Rhinopithecus_roxellana
ENSFALG00000012288	RBFOX3	81	74.468	ENSSBOG00000031591	RBFOX3	95	74.468	Saimiri_boliviensis_boliviensis
ENSFALG00000012288	RBFOX3	98	70.545	ENSSHAG00000016076	RBFOX3	100	70.297	Sarcophilus_harrisii
ENSFALG00000012288	RBFOX3	88	57.703	ENSSFOG00015004716	RBFOX3	92	57.703	Scleropages_formosus
ENSFALG00000012288	RBFOX3	99	66.995	ENSSFOG00015023260	rbfox3a	90	71.233	Scleropages_formosus
ENSFALG00000012288	RBFOX3	99	61.520	ENSSMAG00000012618	rbfox3b	79	65.526	Scophthalmus_maximus
ENSFALG00000012288	RBFOX3	88	66.667	ENSSMAG00000019052	-	95	65.766	Scophthalmus_maximus
ENSFALG00000012288	RBFOX3	100	59.314	ENSSDUG00000015801	-	99	59.069	Seriola_dumerili
ENSFALG00000012288	RBFOX3	85	59.710	ENSSDUG00000023183	rbfox3b	95	56.495	Seriola_dumerili
ENSFALG00000012288	RBFOX3	89	68.595	ENSSLDG00000000149	rbfox3b	90	68.132	Seriola_lalandi_dorsalis
ENSFALG00000012288	RBFOX3	98	61.404	ENSSLDG00000016098	-	98	59.950	Seriola_lalandi_dorsalis
ENSFALG00000012288	RBFOX3	81	75.152	ENSSPUG00000011733	RBFOX3	95	75.152	Sphenodon_punctatus
ENSFALG00000012288	RBFOX3	64	85.106	ENSSPAG00000017571	rbfox3b	64	76.606	Stegastes_partitus
ENSFALG00000012288	RBFOX3	75	57.705	ENSSPAG00000004898	-	75	55.944	Stegastes_partitus
ENSFALG00000012288	RBFOX3	74	73.422	ENSSSCG00000039498	RBFOX3	100	64.674	Sus_scrofa
ENSFALG00000012288	RBFOX3	99	60.396	ENSTRUG00000004894	rbfox3b	97	59.951	Takifugu_rubripes
ENSFALG00000012288	RBFOX3	98	64.951	ENSTNIG00000011278	rbfox3b	99	63.725	Tetraodon_nigroviridis
ENSFALG00000012288	RBFOX3	75	41.379	ENSTBEG00000004296	-	80	42.395	Tupaia_belangeri
ENSFALG00000012288	RBFOX3	81	60.904	ENSTTRG00000003676	RBFOX3	96	64.789	Tursiops_truncatus
ENSFALG00000012288	RBFOX3	81	75.076	ENSUAMG00000004668	RBFOX3	95	75.076	Ursus_americanus
ENSFALG00000012288	RBFOX3	99	70.750	ENSVVUG00000017864	RBFOX3	95	75.380	Vulpes_vulpes
ENSFALG00000012288	RBFOX3	99	62.069	ENSXETG00000020236	rbfox3	99	61.765	Xenopus_tropicalis
ENSFALG00000012288	RBFOX3	89	67.857	ENSXCOG00000018262	rbfox3b	92	66.849	Xiphophorus_couchianus
ENSFALG00000012288	RBFOX3	99	64.356	ENSXMAG00000012939	rbfox3b	90	68.132	Xiphophorus_maculatus