EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000012320 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 5747 bases
Position: chrJH603471.1:222609-228355
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000012869	SMN	PF06003.12	6.7e-139	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000012919	-	1845	-	ENSFALP00000012869	269 (aa)	-	U3KCW5

Gene Model

Click here to download ENSFALG00000012320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000012320's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000012320	-	94	58.088	ENSG00000172062	SMN1	89	60.784	Homo_sapiens
ENSFALG00000012320	-	94	58.088	ENSG00000205571	SMN2	89	60.784	Homo_sapiens
ENSFALG00000012320	-	95	48.540	ENSAPOG00000011324	smn1	95	54.182	Acanthochromis_polyacanthus
ENSFALG00000012320	-	91	62.595	ENSAMEG00000003316	-	86	63.498	Ailuropoda_melanoleuca
ENSFALG00000012320	-	87	50.196	ENSACIG00000019772	-	94	53.333	Amphilophus_citrinellus
ENSFALG00000012320	-	95	50.000	ENSAOCG00000024444	smn1	95	53.455	Amphiprion_ocellaris
ENSFALG00000012320	-	95	51.493	ENSAPEG00000016504	smn1	97	53.455	Amphiprion_percula
ENSFALG00000012320	-	90	55.344	ENSATEG00000002182	smn1	78	56.489	Anabas_testudineus
ENSFALG00000012320	-	70	79.703	ENSAPLG00000010912	-	100	79.899	Anas_platyrhynchos
ENSFALG00000012320	-	95	67.547	ENSACAG00000010017	-	93	63.333	Anolis_carolinensis
ENSFALG00000012320	-	91	59.398	ENSANAG00000032133	-	89	59.398	Aotus_nancymaae
ENSFALG00000012320	-	95	54.135	ENSACLG00000007308	smn1	91	56.618	Astatotilapia_calliptera
ENSFALG00000012320	-	94	61.338	ENSBTAG00000005743	SMN2	92	61.111	Bos_taurus
ENSFALG00000012320	-	91	60.000	ENSCJAG00000016290	-	89	60.000	Callithrix_jacchus
ENSFALG00000012320	-	91	63.118	ENSCAFG00000007812	SMN	90	63.118	Canis_familiaris
ENSFALG00000012320	-	91	63.118	ENSCAFG00020019229	-	84	63.118	Canis_lupus_dingo
ENSFALG00000012320	-	94	61.029	ENSCHIG00000015559	-	90	61.029	Capra_hircus
ENSFALG00000012320	-	94	60.370	ENSTSYG00000012058	-	90	62.357	Carlito_syrichta
ENSFALG00000012320	-	71	53.431	ENSCAPG00000011021	-	91	46.606	Cavia_aperea
ENSFALG00000012320	-	94	58.242	ENSCPOG00000012328	-	91	58.242	Cavia_porcellus
ENSFALG00000012320	-	94	59.259	ENSCPOG00000036973	-	90	59.259	Cavia_porcellus
ENSFALG00000012320	-	91	58.935	ENSCCAG00000018127	-	89	58.935	Cebus_capucinus
ENSFALG00000012320	-	91	59.848	ENSCATG00000037002	-	89	61.176	Cercocebus_atys
ENSFALG00000012320	-	94	57.196	ENSCLAG00000000284	-	91	58.889	Chinchilla_lanigera
ENSFALG00000012320	-	94	58.824	ENSCSAG00000015688	-	89	60.606	Chlorocebus_sabaeus
ENSFALG00000012320	-	70	80.000	ENSCHOG00000007346	-	100	51.648	Choloepus_hoffmanni
ENSFALG00000012320	-	95	74.242	ENSCPBG00000010968	-	99	74.905	Chrysemys_picta_bellii
ENSFALG00000012320	-	91	60.305	ENSCANG00000038242	-	91	62.055	Colobus_angolensis_palliatus
ENSFALG00000012320	-	90	57.955	ENSCANG00000033324	-	94	55.914	Colobus_angolensis_palliatus
ENSFALG00000012320	-	69	52.880	ENSCGRG00001016998	-	85	54.808	Cricetulus_griseus_chok1gshd
ENSFALG00000012320	-	91	59.387	ENSCGRG00001017959	-	90	60.305	Cricetulus_griseus_chok1gshd
ENSFALG00000012320	-	91	59.387	ENSCGRG00000007698	Smn1	90	60.305	Cricetulus_griseus_crigri
ENSFALG00000012320	-	90	49.071	ENSCSEG00000015227	smn1	93	53.903	Cynoglossus_semilaevis
ENSFALG00000012320	-	95	47.426	ENSCVAG00000007498	smn1	95	54.874	Cyprinodon_variegatus
ENSFALG00000012320	-	95	56.343	ENSDARG00000018494	smn1	95	57.836	Danio_rerio
ENSFALG00000012320	-	59	57.862	ENSDNOG00000045949	-	86	54.822	Dasypus_novemcinctus
ENSFALG00000012320	-	82	56.356	ENSDNOG00000007283	-	98	59.494	Dasypus_novemcinctus
ENSFALG00000012320	-	85	53.061	ENSDORG00000007082	Smn1	89	56.098	Dipodomys_ordii
ENSFALG00000012320	-	65	53.261	ENSETEG00000001406	-	79	53.614	Echinops_telfairi
ENSFALG00000012320	-	95	43.056	ENSEBUG00000011902	smn1	91	41.445	Eptatretus_burgeri
ENSFALG00000012320	-	88	57.031	ENSEASG00005018000	-	89	58.755	Equus_asinus_asinus
ENSFALG00000012320	-	91	59.848	ENSECAG00000015215	-	90	61.509	Equus_caballus
ENSFALG00000012320	-	88	59.600	ENSEEUG00000015777	-	100	60.714	Erinaceus_europaeus
ENSFALG00000012320	-	95	57.407	ENSELUG00000018067	smn1	95	54.579	Esox_lucius
ENSFALG00000012320	-	91	60.837	ENSFCAG00000028292	SMN	90	62.879	Felis_catus
ENSFALG00000012320	-	94	57.509	ENSFDAG00000017683	-	91	56.410	Fukomys_damarensis
ENSFALG00000012320	-	95	54.212	ENSFHEG00000018508	smn1	99	53.623	Fundulus_heteroclitus
ENSFALG00000012320	-	95	49.237	ENSGMOG00000017279	smn1	92	53.788	Gadus_morhua
ENSFALG00000012320	-	95	85.098	ENSGALG00000002430	SMN	100	84.337	Gallus_gallus
ENSFALG00000012320	-	95	51.765	ENSGAFG00000009501	smn1	95	55.797	Gambusia_affinis
ENSFALG00000012320	-	95	52.091	ENSGACG00000010584	smn1	92	54.717	Gasterosteus_aculeatus
ENSFALG00000012320	-	90	41.837	ENSGAGG00000013639	-	89	42.609	Gopherus_agassizii
ENSFALG00000012320	-	95	73.485	ENSGAGG00000011374	-	94	74.242	Gopherus_agassizii
ENSFALG00000012320	-	88	54.618	ENSGGOG00000003872	-	89	55.285	Gorilla_gorilla
ENSFALG00000012320	-	59	61.310	ENSGGOG00000026704	-	77	61.310	Gorilla_gorilla
ENSFALG00000012320	-	95	54.135	ENSHBUG00000013987	smn1	95	56.827	Haplochromis_burtoni
ENSFALG00000012320	-	94	56.343	ENSHGLG00000001905	-	92	56.343	Heterocephalus_glaber_female
ENSFALG00000012320	-	94	55.762	ENSHGLG00000001018	-	90	57.778	Heterocephalus_glaber_female
ENSFALG00000012320	-	94	55.762	ENSHGLG00100011252	-	90	57.778	Heterocephalus_glaber_male
ENSFALG00000012320	-	89	57.647	ENSHGLG00100018676	-	93	57.647	Heterocephalus_glaber_male
ENSFALG00000012320	-	95	50.725	ENSHCOG00000017136	smn1	88	51.301	Hippocampus_comes
ENSFALG00000012320	-	95	53.846	ENSIPUG00000012580	smn1	84	52.158	Ictalurus_punctatus
ENSFALG00000012320	-	88	61.753	ENSSTOG00000012288	-	91	62.698	Ictidomys_tridecemlineatus
ENSFALG00000012320	-	51	51.449	ENSJJAG00000014853	-	95	52.688	Jaculus_jaculus
ENSFALG00000012320	-	95	50.725	ENSKMAG00000007239	smn1	99	55.678	Kryptolebias_marmoratus
ENSFALG00000012320	-	94	53.986	ENSLBEG00000022550	smn1	98	54.579	Labrus_bergylta
ENSFALG00000012320	-	90	36.122	ENSLACG00000009808	-	89	37.956	Latimeria_chalumnae
ENSFALG00000012320	-	89	34.109	ENSLOCG00000000801	-	81	31.034	Lepisosteus_oculatus
ENSFALG00000012320	-	99	50.530	ENSLOCG00000011339	smn1	95	54.511	Lepisosteus_oculatus
ENSFALG00000012320	-	91	60.755	ENSLAFG00000003425	-	87	60.755	Loxodonta_africana
ENSFALG00000012320	-	94	56.089	ENSMFAG00000008812	-	89	57.576	Macaca_fascicularis
ENSFALG00000012320	-	95	57.664	ENSMFAG00000031523	SMN1	96	58.824	Macaca_fascicularis
ENSFALG00000012320	-	91	59.470	ENSMMUG00000020214	SMN1	90	60.700	Macaca_mulatta
ENSFALG00000012320	-	94	55.351	ENSMMUG00000030594	-	89	56.818	Macaca_mulatta
ENSFALG00000012320	-	72	48.357	ENSMNEG00000036423	-	84	49.309	Macaca_nemestrina
ENSFALG00000012320	-	93	58.955	ENSMNEG00000035094	-	90	60.700	Macaca_nemestrina
ENSFALG00000012320	-	91	59.848	ENSMLEG00000041902	-	90	61.176	Mandrillus_leucophaeus
ENSFALG00000012320	-	95	53.137	ENSMAMG00000011034	smn1	95	54.348	Mastacembelus_armatus
ENSFALG00000012320	-	95	54.135	ENSMZEG00005013634	smn1	95	56.618	Maylandia_zebra
ENSFALG00000012320	-	71	79.581	ENSMGAG00000008889	-	100	79.058	Meleagris_gallopavo
ENSFALG00000012320	-	91	59.387	ENSMAUG00000010262	Smn1	90	60.305	Mesocricetus_auratus
ENSFALG00000012320	-	75	58.182	ENSMICG00000034708	-	81	58.571	Microcebus_murinus
ENSFALG00000012320	-	91	60.000	ENSMOCG00000017833	Smn1	90	61.069	Microtus_ochrogaster
ENSFALG00000012320	-	91	51.562	ENSMMOG00000005504	smn1	93	51.562	Mola_mola
ENSFALG00000012320	-	94	64.773	ENSMODG00000001436	-	90	70.076	Monodelphis_domestica
ENSFALG00000012320	-	95	50.714	ENSMALG00000008025	smn1	95	53.191	Monopterus_albus
ENSFALG00000012320	-	91	57.634	MGP_CAROLIEiJ_G0018836	Smn1	90	60.076	Mus_caroli
ENSFALG00000012320	-	91	57.252	ENSMUSG00000021645	Smn1	90	59.696	Mus_musculus
ENSFALG00000012320	-	91	59.231	MGP_PahariEiJ_G0015911	Smn1	90	59.770	Mus_pahari
ENSFALG00000012320	-	91	59.160	MGP_SPRETEiJ_G0019718	Smn1	90	60.076	Mus_spretus
ENSFALG00000012320	-	89	62.646	ENSMPUG00000014470	-	90	63.566	Mustela_putorius_furo
ENSFALG00000012320	-	91	61.624	ENSMLUG00000010603	-	86	59.273	Myotis_lucifugus
ENSFALG00000012320	-	95	59.636	ENSNGAG00000019833	Smn1	93	59.636	Nannospalax_galili
ENSFALG00000012320	-	95	53.532	ENSNBRG00000023000	smn1	95	58.182	Neolamprologus_brichardi
ENSFALG00000012320	-	94	58.088	ENSNLEG00000004454	-	89	60.784	Nomascus_leucogenys
ENSFALG00000012320	-	79	64.126	ENSMEUG00000011393	-	100	65.919	Notamacropus_eugenii
ENSFALG00000012320	-	88	59.216	ENSOPRG00000002015	-	100	61.569	Ochotona_princeps
ENSFALG00000012320	-	88	58.268	ENSODEG00000015976	-	89	60.236	Octodon_degus
ENSFALG00000012320	-	95	53.160	ENSONIG00000011799	smn1	95	57.818	Oreochromis_niloticus
ENSFALG00000012320	-	91	70.196	ENSOANG00000001626	-	92	70.588	Ornithorhynchus_anatinus
ENSFALG00000012320	-	83	55.144	ENSOCUG00000025183	-	89	55.738	Oryctolagus_cuniculus
ENSFALG00000012320	-	91	61.569	ENSOCUG00000017097	-	89	61.569	Oryctolagus_cuniculus
ENSFALG00000012320	-	95	59.925	ENSOCUG00000026649	-	91	59.925	Oryctolagus_cuniculus
ENSFALG00000012320	-	52	62.329	ENSORLG00000010552	smn1	95	53.623	Oryzias_latipes
ENSFALG00000012320	-	95	54.198	ENSORLG00020007936	smn1	94	52.490	Oryzias_latipes_hni
ENSFALG00000012320	-	52	61.644	ENSORLG00015022425	smn1	95	53.261	Oryzias_latipes_hsok
ENSFALG00000012320	-	95	49.632	ENSOMEG00000007824	smn1	95	53.261	Oryzias_melastigma
ENSFALG00000012320	-	88	54.826	ENSOGAG00000031414	-	89	54.440	Otolemur_garnettii
ENSFALG00000012320	-	96	60.219	ENSOARG00000005425	-	96	61.111	Ovis_aries
ENSFALG00000012320	-	94	58.088	ENSPPAG00000036640	-	89	60.784	Pan_paniscus
ENSFALG00000012320	-	91	61.977	ENSPPRG00000005575	-	90	62.879	Panthera_pardus
ENSFALG00000012320	-	91	61.742	ENSPTIG00000007745	-	90	62.642	Panthera_tigris_altaica
ENSFALG00000012320	-	94	57.455	ENSPTRG00000016955	-	91	58.182	Pan_troglodytes
ENSFALG00000012320	-	93	56.877	ENSPANG00000000253	-	90	57.621	Papio_anubis
ENSFALG00000012320	-	94	58.456	ENSPANG00000013601	-	89	60.227	Papio_anubis
ENSFALG00000012320	-	95	50.746	ENSPKIG00000011096	smn1	95	53.558	Paramormyrops_kingsleyae
ENSFALG00000012320	-	95	72.180	ENSPSIG00000014787	-	86	72.180	Pelodiscus_sinensis
ENSFALG00000012320	-	92	53.846	ENSPMGG00000012285	smn1	91	51.200	Periophthalmus_magnuspinnatus
ENSFALG00000012320	-	93	44.000	ENSPMAG00000005004	smn1	92	42.182	Petromyzon_marinus
ENSFALG00000012320	-	94	66.288	ENSPCIG00000025764	-	92	69.697	Phascolarctos_cinereus
ENSFALG00000012320	-	95	50.725	ENSPFOG00000007786	smn1	95	55.797	Poecilia_formosa
ENSFALG00000012320	-	95	52.107	ENSPLAG00000012071	smn1	95	56.159	Poecilia_latipinna
ENSFALG00000012320	-	95	51.724	ENSPMEG00000017085	smn1	95	55.797	Poecilia_mexicana
ENSFALG00000012320	-	95	52.308	ENSPREG00000005824	smn1	95	56.522	Poecilia_reticulata
ENSFALG00000012320	-	95	57.509	ENSPPYG00000015533	-	96	58.456	Pongo_abelii
ENSFALG00000012320	-	87	44.856	ENSPPYG00000019189	-	99	42.798	Pongo_abelii
ENSFALG00000012320	-	91	60.606	ENSPCAG00000004187	-	98	60.606	Procavia_capensis
ENSFALG00000012320	-	69	58.000	ENSPCOG00000022307	-	91	57.843	Propithecus_coquereli
ENSFALG00000012320	-	91	62.214	ENSPVAG00000005977	-	89	63.498	Pteropus_vampyrus
ENSFALG00000012320	-	95	53.532	ENSPNYG00000014148	smn1	95	58.182	Pundamilia_nyererei
ENSFALG00000012320	-	94	54.753	ENSPNAG00000014007	smn1	82	54.753	Pygocentrus_nattereri
ENSFALG00000012320	-	91	57.854	ENSRNOG00000018067	Smn1	90	59.924	Rattus_norvegicus
ENSFALG00000012320	-	91	59.848	ENSRBIG00000037052	-	89	60.606	Rhinopithecus_bieti
ENSFALG00000012320	-	94	52.652	ENSRBIG00000036775	-	91	51.103	Rhinopithecus_bieti
ENSFALG00000012320	-	91	59.848	ENSRROG00000039399	-	89	61.569	Rhinopithecus_roxellana
ENSFALG00000012320	-	91	50.787	ENSRROG00000031088	-	88	50.584	Rhinopithecus_roxellana
ENSFALG00000012320	-	91	59.387	ENSSBOG00000011665	-	89	60.536	Saimiri_boliviensis_boliviensis
ENSFALG00000012320	-	85	55.336	ENSSBOG00000020112	-	87	55.731	Saimiri_boliviensis_boliviensis
ENSFALG00000012320	-	94	66.288	ENSSHAG00000001499	-	96	69.697	Sarcophilus_harrisii
ENSFALG00000012320	-	95	55.094	ENSSFOG00015015507	smn1	95	57.836	Scleropages_formosus
ENSFALG00000012320	-	95	47.183	ENSSMAG00000007922	smn1	95	53.650	Scophthalmus_maximus
ENSFALG00000012320	-	95	50.357	ENSSDUG00000018533	smn1	95	55.435	Seriola_dumerili
ENSFALG00000012320	-	95	50.714	ENSSLDG00000021135	smn1	95	55.797	Seriola_lalandi_dorsalis
ENSFALG00000012320	-	95	74.242	ENSSPUG00000000373	-	94	75.379	Sphenodon_punctatus
ENSFALG00000012320	-	95	50.193	ENSSPAG00000004345	smn1	95	52.364	Stegastes_partitus
ENSFALG00000012320	-	91	47.154	ENSSSCG00000029127	-	87	49.597	Sus_scrofa
ENSFALG00000012320	-	91	62.357	ENSSSCG00000016970	-	89	63.258	Sus_scrofa
ENSFALG00000012320	-	71	43.005	ENSSSCG00000033865	-	92	44.792	Sus_scrofa
ENSFALG00000012320	-	88	78.906	ENSTGUG00000001548	-	92	78.682	Taeniopygia_guttata
ENSFALG00000012320	-	55	59.333	ENSTRUG00000000736	smn	95	51.103	Takifugu_rubripes
ENSFALG00000012320	-	95	46.691	ENSTNIG00000009892	smn1	95	49.458	Tetraodon_nigroviridis
ENSFALG00000012320	-	59	64.286	ENSTBEG00000002399	-	87	63.587	Tupaia_belangeri
ENSFALG00000012320	-	94	61.654	ENSTTRG00000005080	-	90	62.547	Tursiops_truncatus
ENSFALG00000012320	-	59	64.286	ENSUAMG00000024947	-	68	62.105	Ursus_americanus
ENSFALG00000012320	-	91	62.595	ENSUMAG00000007842	-	67	63.498	Ursus_maritimus
ENSFALG00000012320	-	88	55.556	ENSVPAG00000009887	-	90	55.159	Vicugna_pacos
ENSFALG00000012320	-	91	63.118	ENSVVUG00000006934	-	90	63.118	Vulpes_vulpes
ENSFALG00000012320	-	99	58.423	ENSXETG00000018189	smn2	91	57.509	Xenopus_tropicalis
ENSFALG00000012320	-	95	52.256	ENSXMAG00000001521	smn1	95	56.159	Xiphophorus_maculatus