EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000012389 (Gene tree)
Gene ID: -
Gene Symbol: LARP6
Alias: FLJ11196|acheron
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 7246 bases
Position: chrJH603201.1:7366583-7373828
Accession: 24012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000012931	La	PF05383.17	3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000012983	LARP6-201	2525	-	ENSFALP00000012931	466 (aa)	-	U3KD27

Gene Model

Click here to download ENSFALG00000012389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000012389's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000012389	LARP6	99	65.625	ENSG00000166173	LARP6	88	68.636	Homo_sapiens
ENSFALG00000012389	LARP6	97	58.700	ENSAPOG00000021773	larp6a	62	60.674	Acanthochromis_polyacanthus
ENSFALG00000012389	LARP6	91	69.484	ENSAMEG00000008897	LARP6	99	69.484	Ailuropoda_melanoleuca
ENSFALG00000012389	LARP6	97	60.042	ENSACIG00000005166	larp6a	85	61.798	Amphilophus_citrinellus
ENSFALG00000012389	LARP6	97	58.700	ENSAOCG00000002284	larp6a	62	60.674	Amphiprion_ocellaris
ENSFALG00000012389	LARP6	97	58.700	ENSAPEG00000008077	larp6a	84	60.674	Amphiprion_percula
ENSFALG00000012389	LARP6	97	59.205	ENSATEG00000004018	larp6a	62	61.348	Anabas_testudineus
ENSFALG00000012389	LARP6	90	89.499	ENSAPLG00000009914	LARP6	99	89.499	Anas_platyrhynchos
ENSFALG00000012389	LARP6	88	69.880	ENSACAG00000008613	LARP6	97	69.471	Anolis_carolinensis
ENSFALG00000012389	LARP6	99	66.042	ENSANAG00000024860	LARP6	88	69.091	Aotus_nancymaae
ENSFALG00000012389	LARP6	97	59.619	ENSACLG00000018561	larp6a	61	61.348	Astatotilapia_calliptera
ENSFALG00000012389	LARP6	89	42.118	ENSAMXG00000036816	-	95	42.118	Astyanax_mexicanus
ENSFALG00000012389	LARP6	95	58.225	ENSAMXG00000029387	larp6a	68	58.425	Astyanax_mexicanus
ENSFALG00000012389	LARP6	99	64.375	ENSBTAG00000003915	LARP6	96	60.625	Bos_taurus
ENSFALG00000012389	LARP6	99	65.625	ENSCJAG00000018642	-	88	68.636	Callithrix_jacchus
ENSFALG00000012389	LARP6	99	65.625	ENSCJAG00000046236	-	88	68.182	Callithrix_jacchus
ENSFALG00000012389	LARP6	90	70.657	ENSCAFG00000017616	LARP6	99	70.657	Canis_familiaris
ENSFALG00000012389	LARP6	99	65.503	ENSCAFG00020007296	LARP6	89	69.545	Canis_lupus_dingo
ENSFALG00000012389	LARP6	99	64.792	ENSCHIG00000013742	LARP6	88	67.955	Capra_hircus
ENSFALG00000012389	LARP6	90	68.779	ENSTSYG00000028124	LARP6	86	68.779	Carlito_syrichta
ENSFALG00000012389	LARP6	89	69.834	ENSCAPG00000015452	LARP6	98	69.834	Cavia_aperea
ENSFALG00000012389	LARP6	99	65.833	ENSCPOG00000022687	LARP6	88	68.409	Cavia_porcellus
ENSFALG00000012389	LARP6	99	65.696	ENSCCAG00000036320	LARP6	97	65.489	Cebus_capucinus
ENSFALG00000012389	LARP6	99	65.625	ENSCATG00000042432	LARP6	88	68.636	Cercocebus_atys
ENSFALG00000012389	LARP6	99	66.250	ENSCLAG00000007893	LARP6	88	69.545	Chinchilla_lanigera
ENSFALG00000012389	LARP6	99	65.625	ENSCSAG00000013672	LARP6	88	68.636	Chlorocebus_sabaeus
ENSFALG00000012389	LARP6	99	64.435	ENSCHOG00000003318	LARP6	99	64.226	Choloepus_hoffmanni
ENSFALG00000012389	LARP6	96	80.000	ENSCPBG00000010771	LARP6	85	80.587	Chrysemys_picta_bellii
ENSFALG00000012389	LARP6	90	69.484	ENSCANG00000025833	LARP6	99	69.484	Colobus_angolensis_palliatus
ENSFALG00000012389	LARP6	99	63.636	ENSCGRG00001024472	Larp6	88	68.182	Cricetulus_griseus_chok1gshd
ENSFALG00000012389	LARP6	99	63.636	ENSCGRG00000004527	Larp6	88	68.182	Cricetulus_griseus_crigri
ENSFALG00000012389	LARP6	97	59.034	ENSCSEG00000011196	larp6a	65	61.036	Cynoglossus_semilaevis
ENSFALG00000012389	LARP6	97	59.494	ENSCVAG00000009605	larp6a	69	59.494	Cyprinodon_variegatus
ENSFALG00000012389	LARP6	92	61.451	ENSDARG00000005355	larp6a	97	62.061	Danio_rerio
ENSFALG00000012389	LARP6	99	64.017	ENSDNOG00000042993	LARP6	97	63.808	Dasypus_novemcinctus
ENSFALG00000012389	LARP6	99	62.004	ENSDORG00000023910	Larp6	97	60.960	Dipodomys_ordii
ENSFALG00000012389	LARP6	76	65.060	ENSETEG00000020390	LARP6	67	71.635	Echinops_telfairi
ENSFALG00000012389	LARP6	99	65.000	ENSEASG00005005490	LARP6	65	68.182	Equus_asinus_asinus
ENSFALG00000012389	LARP6	99	65.000	ENSECAG00000014190	LARP6	97	67.494	Equus_caballus
ENSFALG00000012389	LARP6	92	58.613	ENSELUG00000007341	larp6a	64	58.613	Esox_lucius
ENSFALG00000012389	LARP6	99	65.833	ENSFCAG00000001361	LARP6	88	69.091	Felis_catus
ENSFALG00000012389	LARP6	98	67.387	ENSFDAG00000019994	LARP6	83	70.258	Fukomys_damarensis
ENSFALG00000012389	LARP6	97	59.916	ENSFHEG00000010312	larp6a	67	59.916	Fundulus_heteroclitus
ENSFALG00000012389	LARP6	100	85.805	ENSGALG00000004046	LARP6	95	85.593	Gallus_gallus
ENSFALG00000012389	LARP6	97	59.072	ENSGAFG00000009426	larp6a	67	59.072	Gambusia_affinis
ENSFALG00000012389	LARP6	89	59.815	ENSGACG00000014622	larp6a	96	59.815	Gasterosteus_aculeatus
ENSFALG00000012389	LARP6	90	74.074	ENSGAGG00000010802	LARP6	58	77.834	Gopherus_agassizii
ENSFALG00000012389	LARP6	90	69.484	ENSGGOG00000024151	LARP6	99	69.484	Gorilla_gorilla
ENSFALG00000012389	LARP6	97	59.619	ENSHBUG00000021014	larp6a	61	61.348	Haplochromis_burtoni
ENSFALG00000012389	LARP6	93	70.000	ENSHGLG00000015112	LARP6	88	70.000	Heterocephalus_glaber_female
ENSFALG00000012389	LARP6	90	70.892	ENSHGLG00100013159	LARP6	99	70.892	Heterocephalus_glaber_male
ENSFALG00000012389	LARP6	99	56.875	ENSHCOG00000001241	larp6a	85	58.407	Hippocampus_comes
ENSFALG00000012389	LARP6	95	39.083	ENSIPUG00000002828	-	96	40.284	Ictalurus_punctatus
ENSFALG00000012389	LARP6	91	58.482	ENSIPUG00000010187	larp6	66	59.453	Ictalurus_punctatus
ENSFALG00000012389	LARP6	93	69.545	ENSSTOG00000024279	LARP6	94	69.545	Ictidomys_tridecemlineatus
ENSFALG00000012389	LARP6	99	64.463	ENSJJAG00000011013	Larp6	97	64.509	Jaculus_jaculus
ENSFALG00000012389	LARP6	92	59.775	ENSKMAG00000001702	larp6a	60	59.775	Kryptolebias_marmoratus
ENSFALG00000012389	LARP6	97	56.604	ENSLBEG00000000170	larp6a	83	58.427	Labrus_bergylta
ENSFALG00000012389	LARP6	89	43.318	ENSLACG00000002786	-	98	43.765	Latimeria_chalumnae
ENSFALG00000012389	LARP6	99	67.789	ENSLACG00000018706	LARP6	90	67.804	Latimeria_chalumnae
ENSFALG00000012389	LARP6	91	44.671	ENSLOCG00000008547	-	84	45.080	Lepisosteus_oculatus
ENSFALG00000012389	LARP6	97	59.623	ENSLOCG00000014592	larp6a	65	61.851	Lepisosteus_oculatus
ENSFALG00000012389	LARP6	93	69.318	ENSLAFG00000016343	LARP6	97	69.318	Loxodonta_africana
ENSFALG00000012389	LARP6	93	68.636	ENSMFAG00000035507	LARP6	97	68.636	Macaca_fascicularis
ENSFALG00000012389	LARP6	98	66.314	ENSMMUG00000004429	LARP6	91	68.636	Macaca_mulatta
ENSFALG00000012389	LARP6	99	65.625	ENSMNEG00000045335	LARP6	88	68.636	Macaca_nemestrina
ENSFALG00000012389	LARP6	90	69.484	ENSMLEG00000038587	LARP6	99	69.484	Mandrillus_leucophaeus
ENSFALG00000012389	LARP6	97	59.205	ENSMAMG00000005261	larp6a	62	61.348	Mastacembelus_armatus
ENSFALG00000012389	LARP6	97	59.619	ENSMZEG00005005774	larp6a	61	61.348	Maylandia_zebra
ENSFALG00000012389	LARP6	90	89.474	ENSMGAG00000005077	LARP6	99	89.474	Meleagris_gallopavo
ENSFALG00000012389	LARP6	99	63.918	ENSMAUG00000018486	Larp6	88	67.955	Mesocricetus_auratus
ENSFALG00000012389	LARP6	94	68.919	ENSMICG00000011234	LARP6	97	66.180	Microcebus_murinus
ENSFALG00000012389	LARP6	99	63.883	ENSMOCG00000010492	Larp6	88	67.955	Microtus_ochrogaster
ENSFALG00000012389	LARP6	97	59.454	ENSMMOG00000016284	larp6a	85	61.486	Mola_mola
ENSFALG00000012389	LARP6	99	64.050	ENSMODG00000009034	LARP6	93	64.108	Monodelphis_domestica
ENSFALG00000012389	LARP6	97	58.491	ENSMALG00000014439	larp6a	83	60.449	Monopterus_albus
ENSFALG00000012389	LARP6	99	64.792	MGP_CAROLIEiJ_G0032314	Larp6	89	68.409	Mus_caroli
ENSFALG00000012389	LARP6	99	64.792	ENSMUSG00000034839	Larp6	88	68.409	Mus_musculus
ENSFALG00000012389	LARP6	99	64.583	MGP_PahariEiJ_G0015180	Larp6	88	68.182	Mus_pahari
ENSFALG00000012389	LARP6	99	64.583	MGP_SPRETEiJ_G0033452	Larp6	88	68.182	Mus_spretus
ENSFALG00000012389	LARP6	91	68.852	ENSMPUG00000017086	LARP6	99	68.852	Mustela_putorius_furo
ENSFALG00000012389	LARP6	99	65.417	ENSMLUG00000010319	LARP6	97	65.208	Myotis_lucifugus
ENSFALG00000012389	LARP6	99	64.092	ENSNGAG00000014238	Larp6	88	67.500	Nannospalax_galili
ENSFALG00000012389	LARP6	97	59.408	ENSNBRG00000008120	larp6a	84	61.124	Neolamprologus_brichardi
ENSFALG00000012389	LARP6	99	65.762	ENSNLEG00000013691	LARP6	89	68.636	Nomascus_leucogenys
ENSFALG00000012389	LARP6	78	70.000	ENSMEUG00000002270	LARP6	84	72.464	Notamacropus_eugenii
ENSFALG00000012389	LARP6	76	63.277	ENSOPRG00000004868	-	100	63.277	Ochotona_princeps
ENSFALG00000012389	LARP6	99	65.000	ENSODEG00000015958	LARP6	88	68.636	Octodon_degus
ENSFALG00000012389	LARP6	97	59.368	ENSONIG00000002901	larp6a	84	61.074	Oreochromis_niloticus
ENSFALG00000012389	LARP6	87	64.216	ENSOCUG00000009306	LARP6	99	62.118	Oryctolagus_cuniculus
ENSFALG00000012389	LARP6	97	59.329	ENSORLG00000014256	larp6a	86	61.211	Oryzias_latipes
ENSFALG00000012389	LARP6	97	59.119	ENSORLG00020019657	larp6a	63	60.987	Oryzias_latipes_hni
ENSFALG00000012389	LARP6	97	59.119	ENSORLG00015017915	larp6a	63	60.987	Oryzias_latipes_hsok
ENSFALG00000012389	LARP6	97	59.958	ENSOMEG00000017049	larp6a	63	61.883	Oryzias_melastigma
ENSFALG00000012389	LARP6	99	64.182	ENSOGAG00000000522	LARP6	97	65.417	Otolemur_garnettii
ENSFALG00000012389	LARP6	91	69.087	ENSOARG00000018750	LARP6	98	69.087	Ovis_aries
ENSFALG00000012389	LARP6	90	69.484	ENSPPAG00000031247	LARP6	99	69.484	Pan_paniscus
ENSFALG00000012389	LARP6	99	65.417	ENSPPRG00000011282	LARP6	88	68.636	Panthera_pardus
ENSFALG00000012389	LARP6	90	69.718	ENSPTIG00000015318	LARP6	86	69.718	Panthera_tigris_altaica
ENSFALG00000012389	LARP6	99	65.625	ENSPTRG00000007234	LARP6	88	68.636	Pan_troglodytes
ENSFALG00000012389	LARP6	99	65.625	ENSPANG00000016362	LARP6	88	68.636	Papio_anubis
ENSFALG00000012389	LARP6	98	58.174	ENSPKIG00000020103	larp6a	83	60.274	Paramormyrops_kingsleyae
ENSFALG00000012389	LARP6	99	56.970	ENSPKIG00000004511	LARP6	67	59.348	Paramormyrops_kingsleyae
ENSFALG00000012389	LARP6	67	86.538	ENSPSIG00000009071	LARP6	92	82.212	Pelodiscus_sinensis
ENSFALG00000012389	LARP6	97	59.539	ENSPMGG00000006958	larp6a	86	61.573	Periophthalmus_magnuspinnatus
ENSFALG00000012389	LARP6	99	65.136	ENSPEMG00000012909	Larp6	88	68.182	Peromyscus_maniculatus_bairdii
ENSFALG00000012389	LARP6	94	68.481	ENSPCIG00000020765	LARP6	93	65.289	Phascolarctos_cinereus
ENSFALG00000012389	LARP6	97	59.244	ENSPFOG00000014175	larp6a	90	59.244	Poecilia_formosa
ENSFALG00000012389	LARP6	97	59.494	ENSPLAG00000011105	larp6a	66	59.494	Poecilia_latipinna
ENSFALG00000012389	LARP6	97	59.494	ENSPMEG00000011085	larp6a	67	59.494	Poecilia_mexicana
ENSFALG00000012389	LARP6	97	59.368	ENSPREG00000008067	larp6a	63	60.538	Poecilia_reticulata
ENSFALG00000012389	LARP6	99	64.536	ENSPPYG00000006604	LARP6	88	68.636	Pongo_abelii
ENSFALG00000012389	LARP6	67	75.309	ENSPCAG00000014197	LARP6	75	75.309	Procavia_capensis
ENSFALG00000012389	LARP6	99	66.042	ENSPCOG00000022934	LARP6	97	65.833	Propithecus_coquereli
ENSFALG00000012389	LARP6	99	65.417	ENSPVAG00000005618	LARP6	97	65.208	Pteropus_vampyrus
ENSFALG00000012389	LARP6	97	59.197	ENSPNYG00000009835	larp6a	84	60.899	Pundamilia_nyererei
ENSFALG00000012389	LARP6	92	58.072	ENSPNAG00000017966	larp6a	72	58.072	Pygocentrus_nattereri
ENSFALG00000012389	LARP6	99	64.124	ENSRNOG00000012438	Larp6	88	68.182	Rattus_norvegicus
ENSFALG00000012389	LARP6	99	65.817	ENSRBIG00000032902	LARP6	89	68.565	Rhinopithecus_bieti
ENSFALG00000012389	LARP6	99	65.625	ENSRROG00000043074	LARP6	88	68.636	Rhinopithecus_roxellana
ENSFALG00000012389	LARP6	90	69.718	ENSSBOG00000024190	LARP6	99	69.718	Saimiri_boliviensis_boliviensis
ENSFALG00000012389	LARP6	91	66.355	ENSSHAG00000018495	LARP6	99	66.355	Sarcophilus_harrisii
ENSFALG00000012389	LARP6	98	54.936	ENSSFOG00015002254	LARP6	83	56.849	Scleropages_formosus
ENSFALG00000012389	LARP6	90	59.629	ENSSFOG00015023268	larp6a	83	58.005	Scleropages_formosus
ENSFALG00000012389	LARP6	97	58.737	ENSSMAG00000009953	larp6a	62	61.174	Scophthalmus_maximus
ENSFALG00000012389	LARP6	97	59.329	ENSSDUG00000007438	larp6a	62	61.348	Seriola_dumerili
ENSFALG00000012389	LARP6	97	59.329	ENSSLDG00000016647	larp6a	62	61.348	Seriola_lalandi_dorsalis
ENSFALG00000012389	LARP6	89	80.476	ENSSPUG00000011312	LARP6	99	80.476	Sphenodon_punctatus
ENSFALG00000012389	LARP6	97	59.329	ENSSPAG00000020502	larp6a	62	61.348	Stegastes_partitus
ENSFALG00000012389	LARP6	99	64.124	ENSSSCG00000004974	LARP6	97	64.792	Sus_scrofa
ENSFALG00000012389	LARP6	90	94.976	ENSTGUG00000005808	LARP6	99	94.976	Taeniopygia_guttata
ENSFALG00000012389	LARP6	97	58.368	ENSTRUG00000003151	larp6a	64	60.449	Takifugu_rubripes
ENSFALG00000012389	LARP6	97	57.839	ENSTNIG00000011926	larp6a	88	59.773	Tetraodon_nigroviridis
ENSFALG00000012389	LARP6	90	67.840	ENSTBEG00000015077	LARP6	99	67.840	Tupaia_belangeri
ENSFALG00000012389	LARP6	90	68.779	ENSUAMG00000010467	LARP6	85	68.779	Ursus_americanus
ENSFALG00000012389	LARP6	95	68.527	ENSVVUG00000015227	LARP6	94	70.423	Vulpes_vulpes
ENSFALG00000012389	LARP6	99	69.313	ENSXETG00000020340	larp6	93	68.670	Xenopus_tropicalis
ENSFALG00000012389	LARP6	97	58.650	ENSXCOG00000012654	larp6a	94	58.650	Xiphophorus_couchianus
ENSFALG00000012389	LARP6	97	58.861	ENSXMAG00000021015	larp6a	64	58.861	Xiphophorus_maculatus