EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000012433 (Gene tree)
Gene ID: -
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 32284 bases
Position: chrJH603172.1:14407530-14439813
Accession: 20959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000012998	RRM_1	PF00076.22	8.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000013052	SCAF8-201	3852	-	ENSFALP00000012998	1283 (aa)	-	U3KD94

Gene Model

Click here to download ENSFALG00000012433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000012433's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000012433	SCAF8	100	78.988	ENSG00000213079	SCAF8	100	78.738	Homo_sapiens
ENSFALG00000012433	SCAF8	87	68.351	ENSAPOG00000015527	SCAF8	75	71.558	Acanthochromis_polyacanthus
ENSFALG00000012433	SCAF8	99	79.843	ENSAMEG00000007583	SCAF8	95	79.592	Ailuropoda_melanoleuca
ENSFALG00000012433	SCAF8	87	68.472	ENSAOCG00000002421	SCAF8	74	71.688	Amphiprion_ocellaris
ENSFALG00000012433	SCAF8	88	65.745	ENSATEG00000006959	SCAF8	94	68.579	Anabas_testudineus
ENSFALG00000012433	SCAF8	100	92.618	ENSAPLG00000005765	SCAF8	100	92.230	Anas_platyrhynchos
ENSFALG00000012433	SCAF8	100	81.245	ENSACAG00000005282	SCAF8	100	81.167	Anolis_carolinensis
ENSFALG00000012433	SCAF8	100	79.222	ENSANAG00000036184	SCAF8	100	78.972	Aotus_nancymaae
ENSFALG00000012433	SCAF8	87	68.599	ENSACLG00000018828	SCAF8	77	71.558	Astatotilapia_calliptera
ENSFALG00000012433	SCAF8	100	78.911	ENSBTAG00000031917	SCAF8	100	78.738	Bos_taurus
ENSFALG00000012433	SCAF8	100	79.144	ENSCJAG00000012631	SCAF8	94	79.356	Callithrix_jacchus
ENSFALG00000012433	SCAF8	99	80.235	ENSCAFG00000000570	SCAF8	99	79.827	Canis_familiaris
ENSFALG00000012433	SCAF8	99	80.266	ENSCAFG00020015048	SCAF8	99	79.361	Canis_lupus_dingo
ENSFALG00000012433	SCAF8	100	78.755	ENSCHIG00000025041	SCAF8	100	78.583	Capra_hircus
ENSFALG00000012433	SCAF8	99	78.980	ENSTSYG00000010991	SCAF8	97	78.728	Carlito_syrichta
ENSFALG00000012433	SCAF8	79	70.370	ENSCAPG00000003300	SCAF8	88	70.370	Cavia_aperea
ENSFALG00000012433	SCAF8	100	68.242	ENSCPOG00000030311	-	66	64.578	Cavia_porcellus
ENSFALG00000012433	SCAF8	99	72.188	ENSCPOG00000022216	-	99	71.306	Cavia_porcellus
ENSFALG00000012433	SCAF8	100	79.222	ENSCCAG00000024952	SCAF8	100	78.972	Cebus_capucinus
ENSFALG00000012433	SCAF8	100	79.300	ENSCATG00000035361	SCAF8	100	79.050	Cercocebus_atys
ENSFALG00000012433	SCAF8	99	78.762	ENSCLAG00000004910	SCAF8	100	78.667	Chinchilla_lanigera
ENSFALG00000012433	SCAF8	99	79.765	ENSCSAG00000013430	SCAF8	98	79.513	Chlorocebus_sabaeus
ENSFALG00000012433	SCAF8	100	79.144	ENSCANG00000039499	SCAF8	99	79.356	Colobus_angolensis_palliatus
ENSFALG00000012433	SCAF8	100	76.283	ENSCGRG00001020167	Scaf8	100	75.347	Cricetulus_griseus_chok1gshd
ENSFALG00000012433	SCAF8	99	76.664	ENSCGRG00000004120	Scaf8	99	75.718	Cricetulus_griseus_crigri
ENSFALG00000012433	SCAF8	87	65.862	ENSCSEG00000000043	-	78	66.747	Cynoglossus_semilaevis
ENSFALG00000012433	SCAF8	86	67.543	ENSCVAG00000000925	SCAF8	70	75.663	Cyprinodon_variegatus
ENSFALG00000012433	SCAF8	96	77.192	ENSDNOG00000025271	SCAF8	100	76.546	Dasypus_novemcinctus
ENSFALG00000012433	SCAF8	99	77.535	ENSDORG00000006391	Scaf8	100	77.205	Dipodomys_ordii
ENSFALG00000012433	SCAF8	99	79.216	ENSEASG00005018879	SCAF8	100	77.701	Equus_asinus_asinus
ENSFALG00000012433	SCAF8	100	78.677	ENSECAG00000005540	SCAF8	100	78.972	Equus_caballus
ENSFALG00000012433	SCAF8	84	67.927	ENSELUG00000002779	SCAF8	69	74.212	Esox_lucius
ENSFALG00000012433	SCAF8	100	79.377	ENSFCAG00000023424	SCAF8	100	79.050	Felis_catus
ENSFALG00000012433	SCAF8	99	78.840	ENSFDAG00000010335	SCAF8	99	78.588	Fukomys_damarensis
ENSFALG00000012433	SCAF8	93	68.673	ENSFHEG00000008284	SCAF8	73	76.556	Fundulus_heteroclitus
ENSFALG00000012433	SCAF8	61	66.413	ENSGMOG00000018812	SCAF8	68	68.821	Gadus_morhua
ENSFALG00000012433	SCAF8	99	93.961	ENSGALG00000013635	SCAF8	98	93.961	Gallus_gallus
ENSFALG00000012433	SCAF8	56	59.770	ENSGAFG00000018033	SCAF8	71	74.784	Gambusia_affinis
ENSFALG00000012433	SCAF8	83	67.834	ENSGACG00000006909	SCAF8	88	75.217	Gasterosteus_aculeatus
ENSFALG00000012433	SCAF8	63	84.975	ENSGAGG00000017820	-	88	84.360	Gopherus_agassizii
ENSFALG00000012433	SCAF8	100	78.988	ENSGGOG00000008645	SCAF8	100	78.738	Gorilla_gorilla
ENSFALG00000012433	SCAF8	87	68.478	ENSHBUG00000019537	SCAF8	77	71.429	Haplochromis_burtoni
ENSFALG00000012433	SCAF8	100	78.460	ENSHGLG00000003619	SCAF8	100	78.210	Heterocephalus_glaber_female
ENSFALG00000012433	SCAF8	100	78.460	ENSHGLG00100004708	SCAF8	100	78.667	Heterocephalus_glaber_male
ENSFALG00000012433	SCAF8	99	78.745	ENSSTOG00000026043	SCAF8	99	78.588	Ictidomys_tridecemlineatus
ENSFALG00000012433	SCAF8	99	77.194	ENSJJAG00000020480	Scaf8	99	77.020	Jaculus_jaculus
ENSFALG00000012433	SCAF8	87	67.391	ENSKMAG00000012767	SCAF8	77	70.270	Kryptolebias_marmoratus
ENSFALG00000012433	SCAF8	75	77.407	ENSLBEG00000012484	-	63	77.500	Labrus_bergylta
ENSFALG00000012433	SCAF8	84	78.058	ENSLACG00000001394	SCAF8	99	77.764	Latimeria_chalumnae
ENSFALG00000012433	SCAF8	100	60.047	ENSLOCG00000016856	SCAF8	88	79.971	Lepisosteus_oculatus
ENSFALG00000012433	SCAF8	100	78.244	ENSLAFG00000000022	SCAF8	100	78.149	Loxodonta_africana
ENSFALG00000012433	SCAF8	100	79.300	ENSMFAG00000032738	SCAF8	100	79.050	Macaca_fascicularis
ENSFALG00000012433	SCAF8	100	79.300	ENSMMUG00000015163	SCAF8	100	79.050	Macaca_mulatta
ENSFALG00000012433	SCAF8	100	79.300	ENSMNEG00000043466	SCAF8	100	79.050	Macaca_nemestrina
ENSFALG00000012433	SCAF8	99	79.765	ENSMLEG00000034845	SCAF8	99	79.513	Mandrillus_leucophaeus
ENSFALG00000012433	SCAF8	83	66.496	ENSMAMG00000009457	SCAF8	74	69.018	Mastacembelus_armatus
ENSFALG00000012433	SCAF8	87	68.599	ENSMZEG00005005698	SCAF8	77	71.558	Maylandia_zebra
ENSFALG00000012433	SCAF8	99	93.760	ENSMGAG00000012762	SCAF8	99	93.760	Meleagris_gallopavo
ENSFALG00000012433	SCAF8	99	76.254	ENSMAUG00000009513	Scaf8	100	75.311	Mesocricetus_auratus
ENSFALG00000012433	SCAF8	100	78.694	ENSMICG00000028965	SCAF8	100	77.136	Microcebus_murinus
ENSFALG00000012433	SCAF8	100	76.361	ENSMOCG00000014950	Scaf8	100	75.463	Microtus_ochrogaster
ENSFALG00000012433	SCAF8	83	65.272	ENSMMOG00000002216	SCAF8	76	66.180	Mola_mola
ENSFALG00000012433	SCAF8	99	81.804	ENSMODG00000008301	SCAF8	99	81.647	Monodelphis_domestica
ENSFALG00000012433	SCAF8	87	68.193	ENSMALG00000011584	SCAF8	76	70.337	Monopterus_albus
ENSFALG00000012433	SCAF8	100	75.720	MGP_CAROLIEiJ_G0021016	Scaf8	100	75.545	Mus_caroli
ENSFALG00000012433	SCAF8	100	75.720	ENSMUSG00000046201	Scaf8	100	75.545	Mus_musculus
ENSFALG00000012433	SCAF8	100	75.953	MGP_PahariEiJ_G0023334	Scaf8	100	75.779	Mus_pahari
ENSFALG00000012433	SCAF8	99	79.843	ENSMPUG00000001974	SCAF8	98	79.592	Mustela_putorius_furo
ENSFALG00000012433	SCAF8	99	78.091	ENSMLUG00000029190	SCAF8	99	77.760	Myotis_lucifugus
ENSFALG00000012433	SCAF8	100	76.905	ENSNGAG00000012332	Scaf8	100	76.732	Nannospalax_galili
ENSFALG00000012433	SCAF8	95	63.647	ENSNBRG00000009067	SCAF8	100	63.108	Neolamprologus_brichardi
ENSFALG00000012433	SCAF8	100	77.795	ENSNLEG00000015509	SCAF8	99	77.995	Nomascus_leucogenys
ENSFALG00000012433	SCAF8	70	84.536	ENSOPRG00000018413	-	77	84.536	Ochotona_princeps
ENSFALG00000012433	SCAF8	100	78.399	ENSODEG00000007296	SCAF8	100	78.227	Octodon_degus
ENSFALG00000012433	SCAF8	95	67.290	ENSONIG00000008119	SCAF8	95	70.603	Oreochromis_niloticus
ENSFALG00000012433	SCAF8	99	79.310	ENSOCUG00000026063	SCAF8	99	79.059	Oryctolagus_cuniculus
ENSFALG00000012433	SCAF8	93	68.148	ENSORLG00000017358	SCAF8	75	70.182	Oryzias_latipes
ENSFALG00000012433	SCAF8	93	68.148	ENSORLG00020002214	SCAF8	75	69.661	Oryzias_latipes_hni
ENSFALG00000012433	SCAF8	85	68.395	ENSORLG00015015779	SCAF8	75	70.443	Oryzias_latipes_hsok
ENSFALG00000012433	SCAF8	93	68.681	ENSOMEG00000015471	SCAF8	75	70.573	Oryzias_melastigma
ENSFALG00000012433	SCAF8	99	78.902	ENSOGAG00000034223	SCAF8	94	78.728	Otolemur_garnettii
ENSFALG00000012433	SCAF8	99	79.154	ENSOARG00000004159	SCAF8	100	78.980	Ovis_aries
ENSFALG00000012433	SCAF8	100	79.066	ENSPPAG00000039826	SCAF8	100	78.816	Pan_paniscus
ENSFALG00000012433	SCAF8	100	79.300	ENSPPRG00000023175	SCAF8	100	78.972	Panthera_pardus
ENSFALG00000012433	SCAF8	99	79.765	ENSPTIG00000014836	SCAF8	99	79.435	Panthera_tigris_altaica
ENSFALG00000012433	SCAF8	100	79.066	ENSPTRG00000018727	SCAF8	100	78.816	Pan_troglodytes
ENSFALG00000012433	SCAF8	100	79.300	ENSPANG00000017489	SCAF8	99	78.135	Papio_anubis
ENSFALG00000012433	SCAF8	69	68.192	ENSPKIG00000021212	SCAF8	68	69.149	Paramormyrops_kingsleyae
ENSFALG00000012433	SCAF8	89	85.217	ENSPSIG00000008614	SCAF8	93	86.624	Pelodiscus_sinensis
ENSFALG00000012433	SCAF8	99	76.646	ENSPEMG00000010531	Scaf8	100	76.549	Peromyscus_maniculatus_bairdii
ENSFALG00000012433	SCAF8	100	82.179	ENSPCIG00000001141	SCAF8	100	81.698	Phascolarctos_cinereus
ENSFALG00000012433	SCAF8	85	68.519	ENSPLAG00000021432	SCAF8	71	76.411	Poecilia_latipinna
ENSFALG00000012433	SCAF8	85	68.395	ENSPREG00000000652	SCAF8	71	76.411	Poecilia_reticulata
ENSFALG00000012433	SCAF8	100	77.683	ENSPPYG00000017121	SCAF8	100	76.654	Pongo_abelii
ENSFALG00000012433	SCAF8	85	91.806	ENSPCAG00000013044	SCAF8	90	91.973	Procavia_capensis
ENSFALG00000012433	SCAF8	100	78.771	ENSPCOG00000002067	SCAF8	99	78.516	Propithecus_coquereli
ENSFALG00000012433	SCAF8	99	77.646	ENSPVAG00000005582	SCAF8	100	77.075	Pteropus_vampyrus
ENSFALG00000012433	SCAF8	87	68.599	ENSPNYG00000007277	SCAF8	77	71.558	Pundamilia_nyererei
ENSFALG00000012433	SCAF8	87	66.465	ENSPNAG00000024740	SCAF8	79	70.964	Pygocentrus_nattereri
ENSFALG00000012433	SCAF8	100	76.420	ENSRNOG00000016919	Scaf8	100	76.246	Rattus_norvegicus
ENSFALG00000012433	SCAF8	100	79.222	ENSRBIG00000035769	SCAF8	100	78.972	Rhinopithecus_bieti
ENSFALG00000012433	SCAF8	100	79.222	ENSRROG00000013580	SCAF8	100	78.972	Rhinopithecus_roxellana
ENSFALG00000012433	SCAF8	100	78.833	ENSSBOG00000027023	SCAF8	100	78.738	Saimiri_boliviensis_boliviensis
ENSFALG00000012433	SCAF8	100	81.493	ENSSHAG00000009915	SCAF8	100	81.012	Sarcophilus_harrisii
ENSFALG00000012433	SCAF8	90	69.082	ENSSFOG00015009481	SCAF8	86	68.947	Scleropages_formosus
ENSFALG00000012433	SCAF8	87	68.592	ENSSMAG00000008275	SCAF8	74	71.281	Scophthalmus_maximus
ENSFALG00000012433	SCAF8	100	84.940	ENSSPUG00000015219	SCAF8	100	84.940	Sphenodon_punctatus
ENSFALG00000012433	SCAF8	100	79.455	ENSSSCG00000004070	SCAF8	100	79.349	Sus_scrofa
ENSFALG00000012433	SCAF8	99	95.608	ENSTGUG00000011151	SCAF8	100	95.608	Taeniopygia_guttata
ENSFALG00000012433	SCAF8	85	66.914	ENSTRUG00000009243	SCAF8	75	68.353	Takifugu_rubripes
ENSFALG00000012433	SCAF8	86	65.526	ENSTNIG00000016885	SCAF8	89	72.150	Tetraodon_nigroviridis
ENSFALG00000012433	SCAF8	99	79.529	ENSTTRG00000014538	SCAF8	100	79.121	Tursiops_truncatus
ENSFALG00000012433	SCAF8	100	79.066	ENSUAMG00000024736	SCAF8	99	79.294	Ursus_americanus
ENSFALG00000012433	SCAF8	98	79.365	ENSUMAG00000013404	SCAF8	100	79.110	Ursus_maritimus
ENSFALG00000012433	SCAF8	66	85.891	ENSVPAG00000012465	SCAF8	97	84.909	Vicugna_pacos
ENSFALG00000012433	SCAF8	99	80.078	ENSVVUG00000007532	SCAF8	100	79.428	Vulpes_vulpes
ENSFALG00000012433	SCAF8	99	60.611	ENSXETG00000013132	scaf8	61	82.133	Xenopus_tropicalis
ENSFALG00000012433	SCAF8	85	68.272	ENSXMAG00000019192	SCAF8	71	76.266	Xiphophorus_maculatus