EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000012516 (Gene tree)
Gene ID: -
Gene Symbol: RBM12
Alias: HRIHFB2091|KIAA0765|SWAN
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 2640 bases
Position: chrJH603328.1:357574-360213
Accession: 9898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000013059	RRM_1	PF00076.22	1e-31	1	3
ENSFALP00000013059	RRM_1	PF00076.22	1e-31	2	3
ENSFALP00000013059	RRM_1	PF00076.22	1e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000013113	RBM12-201	2511	-	ENSFALP00000013059	836 (aa)	-	U3KDF5

Gene Model

Click here to download ENSFALG00000012516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000012516's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000012516	RBM12	69	71.429	ENSFALG00000014893	RBM12B	74	71.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000012516	RBM12	100	45.680	ENSACIG00000011053	rbm12	100	46.623	Amphilophus_citrinellus
ENSFALG00000012516	RBM12	76	78.923	ENSACAG00000006330	RBM12	98	74.831	Anolis_carolinensis
ENSFALG00000012516	RBM12	100	75.607	ENSTSYG00000030563	RBM12	98	74.390	Carlito_syrichta
ENSFALG00000012516	RBM12	50	91.111	ENSCPOG00000035170	RBM12	90	75.269	Cavia_porcellus
ENSFALG00000012516	RBM12	98	91.160	ENSCCAG00000035899	-	92	91.111	Cebus_capucinus
ENSFALG00000012516	RBM12	50	93.370	ENSCLAG00000017230	RBM12	100	73.297	Chinchilla_lanigera
ENSFALG00000012516	RBM12	100	73.291	ENSCANG00000030552	RBM12	98	71.996	Colobus_angolensis_palliatus
ENSFALG00000012516	RBM12	66	60.256	ENSEBUG00000016806	rbm12	92	60.784	Eptatretus_burgeri
ENSFALG00000012516	RBM12	75	93.269	ENSGALG00000030253	RBM12	100	86.932	Gallus_gallus
ENSFALG00000012516	RBM12	100	45.955	ENSGACG00000004202	rbm12	98	45.919	Gasterosteus_aculeatus
ENSFALG00000012516	RBM12	50	94.475	ENSHGLG00000013208	RBM12	100	73.305	Heterocephalus_glaber_female
ENSFALG00000012516	RBM12	100	62.431	ENSJJAG00000009879	-	100	60.730	Jaculus_jaculus
ENSFALG00000012516	RBM12	62	96.703	ENSMAMG00000001497	rbm12	93	96.703	Mastacembelus_armatus
ENSFALG00000012516	RBM12	75	93.429	ENSMGAG00000001502	RBM12	72	93.312	Meleagris_gallopavo
ENSFALG00000012516	RBM12	100	68.490	ENSMICG00000029540	-	72	68.326	Microcebus_murinus
ENSFALG00000012516	RBM12	100	74.617	ENSMICG00000032761	-	98	75.275	Microcebus_murinus
ENSFALG00000012516	RBM12	82	45.563	ENSMMOG00000013495	rbm12	85	46.042	Mola_mola
ENSFALG00000012516	RBM12	76	81.847	ENSMODG00000001591	RBM12	98	77.841	Monodelphis_domestica
ENSFALG00000012516	RBM12	50	76.712	ENSMALG00000022679	rbm12	100	76.712	Monopterus_albus
ENSFALG00000012516	RBM12	100	73.205	ENSMLUG00000011217	RBM12	98	71.798	Myotis_lucifugus
ENSFALG00000012516	RBM12	50	93.923	ENSNGAG00000015846	Rbm12	90	74.615	Nannospalax_galili
ENSFALG00000012516	RBM12	100	79.133	ENSMEUG00000007621	RBM12	100	79.361	Notamacropus_eugenii
ENSFALG00000012516	RBM12	100	44.831	ENSOMEG00000008238	rbm12	100	45.130	Oryzias_melastigma
ENSFALG00000012516	RBM12	75	79.775	ENSPSIG00000007369	RBM12	69	79.840	Pelodiscus_sinensis
ENSFALG00000012516	RBM12	51	83.810	ENSPMGG00000018816	rbm12	96	83.810	Periophthalmus_magnuspinnatus
ENSFALG00000012516	RBM12	87	56.338	ENSPFOG00000023551	rbm12	89	67.391	Poecilia_formosa
ENSFALG00000012516	RBM12	100	73.548	ENSPCOG00000023724	RBM12	98	74.298	Propithecus_coquereli
ENSFALG00000012516	RBM12	81	71.151	ENSPVAG00000014937	RBM12	100	71.798	Pteropus_vampyrus
ENSFALG00000012516	RBM12	76	82.003	ENSSHAG00000018585	RBM12	100	77.841	Sarcophilus_harrisii
ENSFALG00000012516	RBM12	100	93.174	ENSTGUG00000003002	RBM12	100	93.174	Taeniopygia_guttata
ENSFALG00000012516	RBM12	87	92.857	ENSVPAG00000003812	RBM12	91	92.857	Vicugna_pacos
ENSFALG00000012516	RBM12	100	61.272	ENSXETG00000033541	RBM12	100	58.718	Xenopus_tropicalis