EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000012583 (Gene tree)
Gene ID: -
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 6306 bases
Position: chrJH603202.1:9497461-9503766
Accession: 101814875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000013131	RRM_1	PF00076.22	3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000013186	SLIRP-201	2694	-	ENSFALP00000013131	106 (aa)	XP_005047538	U3KDM7

Gene Model

Click here to download ENSFALG00000012583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000012583's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000012583	SLIRP	80	33.333	ENSFALG00000007654	HNRNPAB	53	39.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000012583	SLIRP	81	47.674	ENSG00000119705	SLIRP	88	55.224	Homo_sapiens
ENSFALG00000012583	SLIRP	85	52.222	ENSAPOG00000001298	slirp	78	56.410	Acanthochromis_polyacanthus
ENSFALG00000012583	SLIRP	83	50.000	ENSAMEG00000003975	SLIRP	77	51.429	Ailuropoda_melanoleuca
ENSFALG00000012583	SLIRP	85	56.667	ENSACIG00000023083	slirp	77	60.256	Amphilophus_citrinellus
ENSFALG00000012583	SLIRP	85	53.333	ENSAOCG00000006342	slirp	79	58.974	Amphiprion_ocellaris
ENSFALG00000012583	SLIRP	85	53.333	ENSAPEG00000015719	-	80	58.974	Amphiprion_percula
ENSFALG00000012583	SLIRP	85	53.333	ENSAPEG00000015917	slirp	79	58.974	Amphiprion_percula
ENSFALG00000012583	SLIRP	87	54.348	ENSATEG00000013525	slirp	78	60.256	Anabas_testudineus
ENSFALG00000012583	SLIRP	77	47.561	ENSAMXG00000018693	slirp	76	50.000	Astyanax_mexicanus
ENSFALG00000012583	SLIRP	88	48.936	ENSCJAG00000016946	SLIRP	72	52.239	Callithrix_jacchus
ENSFALG00000012583	SLIRP	67	53.521	ENSCAFG00020015876	-	64	53.521	Canis_lupus_dingo
ENSFALG00000012583	SLIRP	88	47.872	ENSCCAG00000030130	SLIRP	66	50.704	Cebus_capucinus
ENSFALG00000012583	SLIRP	92	47.475	ENSCATG00000036327	SLIRP	72	56.716	Cercocebus_atys
ENSFALG00000012583	SLIRP	69	53.425	ENSCSAG00000011736	SLIRP	65	53.521	Chlorocebus_sabaeus
ENSFALG00000012583	SLIRP	75	58.228	ENSCPBG00000026327	SLIRP	78	58.442	Chrysemys_picta_bellii
ENSFALG00000012583	SLIRP	63	55.224	ENSCANG00000032892	SLIRP	68	55.224	Colobus_angolensis_palliatus
ENSFALG00000012583	SLIRP	86	45.652	ENSCGRG00001024068	Slirp	64	50.704	Cricetulus_griseus_chok1gshd
ENSFALG00000012583	SLIRP	86	45.652	ENSCGRG00000017440	Slirp	64	50.704	Cricetulus_griseus_crigri
ENSFALG00000012583	SLIRP	76	49.383	ENSCSEG00000015766	slirp	79	50.000	Cynoglossus_semilaevis
ENSFALG00000012583	SLIRP	72	60.526	ENSCVAG00000012504	slirp	75	60.526	Cyprinodon_variegatus
ENSFALG00000012583	SLIRP	88	52.688	ENSDARG00000097753	slirp	76	58.974	Danio_rerio
ENSFALG00000012583	SLIRP	67	50.704	ENSDNOG00000007721	SLIRP	65	50.704	Dasypus_novemcinctus
ENSFALG00000012583	SLIRP	96	45.192	ENSDORG00000012379	Slirp	64	49.296	Dipodomys_ordii
ENSFALG00000012583	SLIRP	75	53.750	ENSETEG00000010345	SLIRP	66	53.521	Echinops_telfairi
ENSFALG00000012583	SLIRP	86	51.613	ENSEASG00005020193	SLIRP	64	53.521	Equus_asinus_asinus
ENSFALG00000012583	SLIRP	66	54.286	ENSEEUG00000007257	SLIRP	69	54.286	Erinaceus_europaeus
ENSFALG00000012583	SLIRP	80	52.941	ENSELUG00000016800	slirp	77	53.846	Esox_lucius
ENSFALG00000012583	SLIRP	88	48.421	ENSFCAG00000036326	SLIRP	68	53.731	Felis_catus
ENSFALG00000012583	SLIRP	69	47.945	ENSFDAG00000008347	SLIRP	63	47.887	Fukomys_damarensis
ENSFALG00000012583	SLIRP	68	52.778	ENSFHEG00000004709	slirp	65	58.333	Fundulus_heteroclitus
ENSFALG00000012583	SLIRP	89	43.617	ENSGMOG00000016948	slirp	74	49.351	Gadus_morhua
ENSFALG00000012583	SLIRP	92	78.788	ENSGALG00000031238	SLIRP	78	89.189	Gallus_gallus
ENSFALG00000012583	SLIRP	85	55.556	ENSGAFG00000010998	slirp	78	60.256	Gambusia_affinis
ENSFALG00000012583	SLIRP	74	56.410	ENSGACG00000020137	slirp	91	56.410	Gasterosteus_aculeatus
ENSFALG00000012583	SLIRP	97	52.830	ENSGAGG00000009953	SLIRP	54	56.410	Gopherus_agassizii
ENSFALG00000012583	SLIRP	81	47.674	ENSGGOG00000011059	-	72	55.224	Gorilla_gorilla
ENSFALG00000012583	SLIRP	69	47.945	ENSHGLG00000018491	SLIRP	64	47.887	Heterocephalus_glaber_female
ENSFALG00000012583	SLIRP	69	47.945	ENSHGLG00100014153	SLIRP	64	47.887	Heterocephalus_glaber_male
ENSFALG00000012583	SLIRP	88	51.613	ENSHCOG00000006795	slirp	79	57.692	Hippocampus_comes
ENSFALG00000012583	SLIRP	85	52.222	ENSIPUG00000010214	SLIRP	78	57.692	Ictalurus_punctatus
ENSFALG00000012583	SLIRP	72	50.000	ENSSTOG00000034316	SLIRP	64	50.704	Ictidomys_tridecemlineatus
ENSFALG00000012583	SLIRP	77	52.439	ENSKMAG00000002038	slirp	75	53.846	Kryptolebias_marmoratus
ENSFALG00000012583	SLIRP	86	48.352	ENSLBEG00000007564	slirp	78	52.564	Labrus_bergylta
ENSFALG00000012583	SLIRP	75	57.500	ENSLACG00000013434	SLIRP	75	58.974	Latimeria_chalumnae
ENSFALG00000012583	SLIRP	75	50.633	ENSMFAG00000042960	SLIRP	72	56.716	Macaca_fascicularis
ENSFALG00000012583	SLIRP	64	57.353	ENSMMUG00000029256	SLIRP	72	56.716	Macaca_mulatta
ENSFALG00000012583	SLIRP	75	50.633	ENSMNEG00000028921	SLIRP	72	56.716	Macaca_nemestrina
ENSFALG00000012583	SLIRP	92	47.475	ENSMLEG00000043644	SLIRP	68	56.716	Mandrillus_leucophaeus
ENSFALG00000012583	SLIRP	85	52.222	ENSMZEG00005004617	slirp	79	57.692	Maylandia_zebra
ENSFALG00000012583	SLIRP	92	45.455	ENSMAUG00000003857	Slirp	64	49.296	Mesocricetus_auratus
ENSFALG00000012583	SLIRP	93	43.810	ENSMICG00000012080	SLIRP	65	51.429	Microcebus_murinus
ENSFALG00000012583	SLIRP	88	47.872	ENSMOCG00000016019	Slirp	69	51.429	Microtus_ochrogaster
ENSFALG00000012583	SLIRP	83	55.682	ENSMMOG00000018268	slirp	78	57.692	Mola_mola
ENSFALG00000012583	SLIRP	65	47.826	ENSMODG00000005207	-	97	47.826	Monodelphis_domestica
ENSFALG00000012583	SLIRP	80	55.294	ENSMALG00000012581	slirp	80	56.410	Monopterus_albus
ENSFALG00000012583	SLIRP	86	47.312	MGP_CAROLIEiJ_G0017995	Slirp	66	50.704	Mus_caroli
ENSFALG00000012583	SLIRP	86	47.312	ENSMUSG00000021040	Slirp	71	51.429	Mus_musculus
ENSFALG00000012583	SLIRP	86	47.312	MGP_SPRETEiJ_G0018840	Slirp	63	50.704	Mus_spretus
ENSFALG00000012583	SLIRP	80	49.412	ENSMLUG00000024998	-	63	52.857	Myotis_lucifugus
ENSFALG00000012583	SLIRP	69	53.425	ENSMLUG00000029544	-	64	53.521	Myotis_lucifugus
ENSFALG00000012583	SLIRP	86	45.055	ENSNGAG00000016363	Slirp	67	48.571	Nannospalax_galili
ENSFALG00000012583	SLIRP	86	52.688	ENSNLEG00000032459	-	73	55.882	Nomascus_leucogenys
ENSFALG00000012583	SLIRP	82	49.425	ENSNLEG00000027238	-	79	56.522	Nomascus_leucogenys
ENSFALG00000012583	SLIRP	75	49.367	ENSODEG00000012580	SLIRP	76	51.429	Octodon_degus
ENSFALG00000012583	SLIRP	85	52.222	ENSONIG00000011692	slirp	79	57.692	Oreochromis_niloticus
ENSFALG00000012583	SLIRP	92	48.485	ENSOANG00000022366	SLIRP	65	52.778	Ornithorhynchus_anatinus
ENSFALG00000012583	SLIRP	80	54.118	ENSORLG00000010761	slirp	60	55.128	Oryzias_latipes
ENSFALG00000012583	SLIRP	80	52.941	ENSORLG00020022188	slirp	78	53.846	Oryzias_latipes_hni
ENSFALG00000012583	SLIRP	84	52.809	ENSORLG00015020171	slirp	77	55.128	Oryzias_latipes_hsok
ENSFALG00000012583	SLIRP	85	51.111	ENSOMEG00000019321	slirp	78	53.846	Oryzias_melastigma
ENSFALG00000012583	SLIRP	75	50.000	ENSPPAG00000040710	-	72	55.224	Pan_paniscus
ENSFALG00000012583	SLIRP	88	48.421	ENSPPRG00000014350	SLIRP	68	53.731	Panthera_pardus
ENSFALG00000012583	SLIRP	88	48.421	ENSPTIG00000014196	SLIRP	68	53.731	Panthera_tigris_altaica
ENSFALG00000012583	SLIRP	81	47.674	ENSPTRG00000030691	SLIRP	72	55.224	Pan_troglodytes
ENSFALG00000012583	SLIRP	92	48.485	ENSPANG00000026323	SLIRP	72	56.716	Papio_anubis
ENSFALG00000012583	SLIRP	63	51.429	ENSPKIG00000008831	slirp	59	55.000	Paramormyrops_kingsleyae
ENSFALG00000012583	SLIRP	71	57.333	ENSPMGG00000010541	slirp	86	57.333	Periophthalmus_magnuspinnatus
ENSFALG00000012583	SLIRP	70	45.946	ENSPEMG00000013234	Slirp	69	47.143	Peromyscus_maniculatus_bairdii
ENSFALG00000012583	SLIRP	60	46.875	ENSPMAG00000009355	slirp	71	46.875	Petromyzon_marinus
ENSFALG00000012583	SLIRP	83	46.591	ENSPCIG00000026842	-	80	50.000	Phascolarctos_cinereus
ENSFALG00000012583	SLIRP	85	54.444	ENSPFOG00000006758	slirp	75	61.333	Poecilia_formosa
ENSFALG00000012583	SLIRP	85	54.444	ENSPLAG00000011140	slirp	75	61.333	Poecilia_latipinna
ENSFALG00000012583	SLIRP	85	54.444	ENSPMEG00000019535	slirp	75	61.333	Poecilia_mexicana
ENSFALG00000012583	SLIRP	85	54.444	ENSPREG00000011673	slirp	75	61.333	Poecilia_reticulata
ENSFALG00000012583	SLIRP	69	56.164	ENSPPYG00000006030	SLIRP	64	57.143	Pongo_abelii
ENSFALG00000012583	SLIRP	77	46.341	ENSPCOG00000015159	SLIRP	65	50.000	Propithecus_coquereli
ENSFALG00000012583	SLIRP	88	53.763	ENSPNAG00000008633	slirp	79	60.256	Pygocentrus_nattereri
ENSFALG00000012583	SLIRP	66	54.286	ENSRBIG00000031396	-	70	54.286	Rhinopithecus_bieti
ENSFALG00000012583	SLIRP	63	55.224	ENSRBIG00000032998	-	62	55.224	Rhinopithecus_bieti
ENSFALG00000012583	SLIRP	75	50.633	ENSRBIG00000032222	-	72	56.716	Rhinopithecus_bieti
ENSFALG00000012583	SLIRP	67	47.887	ENSRBIG00000035817	-	65	47.887	Rhinopithecus_bieti
ENSFALG00000012583	SLIRP	63	56.716	ENSRROG00000017133	-	70	56.716	Rhinopithecus_roxellana
ENSFALG00000012583	SLIRP	75	50.633	ENSRROG00000036656	-	72	56.716	Rhinopithecus_roxellana
ENSFALG00000012583	SLIRP	66	52.857	ENSRROG00000035604	-	70	52.857	Rhinopithecus_roxellana
ENSFALG00000012583	SLIRP	70	51.351	ENSRROG00000041312	-	70	53.521	Rhinopithecus_roxellana
ENSFALG00000012583	SLIRP	87	48.913	ENSSBOG00000020014	SLIRP	72	55.224	Saimiri_boliviensis_boliviensis
ENSFALG00000012583	SLIRP	82	52.222	ENSSFOG00015011165	slirp	78	57.143	Scleropages_formosus
ENSFALG00000012583	SLIRP	74	47.436	ENSSMAG00000012930	slirp	76	47.436	Scophthalmus_maximus
ENSFALG00000012583	SLIRP	85	48.889	ENSSDUG00000021883	slirp	51	52.564	Seriola_dumerili
ENSFALG00000012583	SLIRP	85	48.889	ENSSLDG00000023136	slirp	71	52.564	Seriola_lalandi_dorsalis
ENSFALG00000012583	SLIRP	90	53.684	ENSSPUG00000009346	SLIRP	79	57.143	Sphenodon_punctatus
ENSFALG00000012583	SLIRP	80	48.235	ENSSPAG00000013477	slirp	77	50.649	Stegastes_partitus
ENSFALG00000012583	SLIRP	72	50.000	ENSSSCG00000028167	SLIRP	64	50.704	Sus_scrofa
ENSFALG00000012583	SLIRP	88	89.247	ENSTGUG00000012337	SLIRP	88	89.247	Taeniopygia_guttata
ENSFALG00000012583	SLIRP	83	47.191	ENSTRUG00000020127	slirp	78	46.835	Takifugu_rubripes
ENSFALG00000012583	SLIRP	84	52.747	ENSUAMG00000022445	SLIRP	64	54.930	Ursus_americanus
ENSFALG00000012583	SLIRP	84	52.747	ENSUMAG00000007166	SLIRP	64	54.930	Ursus_maritimus
ENSFALG00000012583	SLIRP	84	47.253	ENSVPAG00000001781	SLIRP	66	50.704	Vicugna_pacos
ENSFALG00000012583	SLIRP	75	50.633	ENSVVUG00000004436	SLIRP	64	52.113	Vulpes_vulpes
ENSFALG00000012583	SLIRP	71	60.000	ENSXETG00000030343	SLIRP	84	60.000	Xenopus_tropicalis
ENSFALG00000012583	SLIRP	83	53.409	ENSXCOG00000009422	slirp	78	57.692	Xiphophorus_couchianus
ENSFALG00000012583	SLIRP	85	54.444	ENSXMAG00000015655	slirp	78	58.974	Xiphophorus_maculatus