EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000012738 (Gene tree)
Gene ID: -
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 77251 bases
Position: chrJH603183.1:12700389-12777639
Accession: 101812235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000013294	PPR	PF01535.20	2.4e-28	1	5
ENSFALP00000013294	PPR	PF01535.20	2.4e-28	2	5
ENSFALP00000013294	PPR	PF01535.20	2.4e-28	3	5
ENSFALP00000013294	PPR	PF01535.20	2.4e-28	4	5
ENSFALP00000013294	PPR	PF01535.20	2.4e-28	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000013350	LRPPRC-201	4521	XM_005043146	ENSFALP00000013294	1335 (aa)	XP_005043203	U3KE40

Gene Model

Click here to download ENSFALG00000012738's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000012738's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000012738	LRPPRC	99	50.223	ENSAPOG00000016610	lrpprc	94	50.223	Acanthochromis_polyacanthus
ENSFALG00000012738	LRPPRC	99	57.314	ENSAMEG00000005852	LRPPRC	99	56.407	Ailuropoda_melanoleuca
ENSFALG00000012738	LRPPRC	99	47.885	ENSACIG00000009604	lrpprc	93	47.885	Amphilophus_citrinellus
ENSFALG00000012738	LRPPRC	99	49.370	ENSAOCG00000005886	lrpprc	94	49.518	Amphiprion_ocellaris
ENSFALG00000012738	LRPPRC	99	47.024	ENSAPEG00000002937	lrpprc	92	47.173	Amphiprion_percula
ENSFALG00000012738	LRPPRC	90	57.753	ENSATEG00000010555	lrpprc	93	57.753	Anabas_testudineus
ENSFALG00000012738	LRPPRC	99	59.837	ENSACAG00000029278	LRPPRC	96	59.837	Anolis_carolinensis
ENSFALG00000012738	LRPPRC	99	56.642	ENSANAG00000027440	LRPPRC	96	56.101	Aotus_nancymaae
ENSFALG00000012738	LRPPRC	99	48.310	ENSACLG00000023712	lrpprc	98	48.310	Astatotilapia_calliptera
ENSFALG00000012738	LRPPRC	99	56.567	ENSCJAG00000000794	LRPPRC	96	55.952	Callithrix_jacchus
ENSFALG00000012738	LRPPRC	99	56.644	ENSCHIG00000020173	LRPPRC	98	55.843	Capra_hircus
ENSFALG00000012738	LRPPRC	99	43.967	ENSCAPG00000013631	LRPPRC	99	43.967	Cavia_aperea
ENSFALG00000012738	LRPPRC	89	54.839	ENSCPOG00000000204	LRPPRC	99	54.839	Cavia_porcellus
ENSFALG00000012738	LRPPRC	99	57.143	ENSCCAG00000031900	LRPPRC	95	57.143	Cebus_capucinus
ENSFALG00000012738	LRPPRC	99	56.450	ENSCATG00000014187	LRPPRC	91	56.975	Cercocebus_atys
ENSFALG00000012738	LRPPRC	99	54.532	ENSCLAG00000005203	LRPPRC	96	54.532	Chinchilla_lanigera
ENSFALG00000012738	LRPPRC	99	56.642	ENSCSAG00000013233	LRPPRC	95	56.642	Chlorocebus_sabaeus
ENSFALG00000012738	LRPPRC	84	59.518	ENSCHOG00000003631	LRPPRC	80	59.518	Choloepus_hoffmanni
ENSFALG00000012738	LRPPRC	99	54.139	ENSCANG00000034961	LRPPRC	99	59.206	Colobus_angolensis_palliatus
ENSFALG00000012738	LRPPRC	99	55.655	ENSCGRG00001016261	Lrpprc	96	55.729	Cricetulus_griseus_chok1gshd
ENSFALG00000012738	LRPPRC	99	55.655	ENSCGRG00000004072	Lrpprc	96	55.729	Cricetulus_griseus_crigri
ENSFALG00000012738	LRPPRC	97	40.738	ENSCSEG00000003850	lrpprc	83	52.370	Cynoglossus_semilaevis
ENSFALG00000012738	LRPPRC	98	50.860	ENSCVAG00000012967	lrpprc	94	50.860	Cyprinodon_variegatus
ENSFALG00000012738	LRPPRC	99	48.132	ENSDARG00000043970	lrpprc	93	48.132	Danio_rerio
ENSFALG00000012738	LRPPRC	81	43.802	ENSDNOG00000032336	-	95	43.802	Dasypus_novemcinctus
ENSFALG00000012738	LRPPRC	99	55.985	ENSDNOG00000012594	-	96	56.357	Dasypus_novemcinctus
ENSFALG00000012738	LRPPRC	99	56.134	ENSDORG00000012233	Lrpprc	96	56.134	Dipodomys_ordii
ENSFALG00000012738	LRPPRC	100	55.778	ENSETEG00000006657	LRPPRC	96	55.778	Echinops_telfairi
ENSFALG00000012738	LRPPRC	87	45.919	ENSEEUG00000012340	LRPPRC	90	45.919	Erinaceus_europaeus
ENSFALG00000012738	LRPPRC	99	47.120	ENSELUG00000012803	lrpprc	98	47.120	Esox_lucius
ENSFALG00000012738	LRPPRC	99	56.973	ENSFCAG00000013468	LRPPRC	96	56.973	Felis_catus
ENSFALG00000012738	LRPPRC	99	54.748	ENSFDAG00000015328	LRPPRC	96	54.748	Fukomys_damarensis
ENSFALG00000012738	LRPPRC	98	50.336	ENSFHEG00000019604	lrpprc	94	50.336	Fundulus_heteroclitus
ENSFALG00000012738	LRPPRC	99	46.378	ENSGMOG00000008337	lrpprc	96	46.378	Gadus_morhua
ENSFALG00000012738	LRPPRC	98	49.925	ENSGAFG00000001455	lrpprc	94	49.925	Gambusia_affinis
ENSFALG00000012738	LRPPRC	98	49.443	ENSGACG00000010679	lrpprc	99	49.443	Gasterosteus_aculeatus
ENSFALG00000012738	LRPPRC	99	50.669	ENSHBUG00000000393	lrpprc	92	50.669	Haplochromis_burtoni
ENSFALG00000012738	LRPPRC	99	54.525	ENSHGLG00000006123	LRPPRC	96	54.525	Heterocephalus_glaber_female
ENSFALG00000012738	LRPPRC	62	54.067	ENSHGLG00100005960	-	99	54.067	Heterocephalus_glaber_male
ENSFALG00000012738	LRPPRC	98	48.889	ENSHCOG00000002107	lrpprc	94	48.889	Hippocampus_comes
ENSFALG00000012738	LRPPRC	99	49.082	ENSIPUG00000009406	lrpprc	93	49.082	Ictalurus_punctatus
ENSFALG00000012738	LRPPRC	99	56.612	ENSSTOG00000011185	LRPPRC	96	56.612	Ictidomys_tridecemlineatus
ENSFALG00000012738	LRPPRC	100	55.712	ENSJJAG00000020475	Lrpprc	97	55.712	Jaculus_jaculus
ENSFALG00000012738	LRPPRC	99	45.944	ENSKMAG00000003287	lrpprc	82	45.944	Kryptolebias_marmoratus
ENSFALG00000012738	LRPPRC	99	45.180	ENSLBEG00000023225	lrpprc	88	56.920	Labrus_bergylta
ENSFALG00000012738	LRPPRC	99	57.551	ENSLACG00000014030	LRPPRC	95	57.551	Latimeria_chalumnae
ENSFALG00000012738	LRPPRC	98	55.630	ENSLOCG00000016390	lrpprc	92	55.630	Lepisosteus_oculatus
ENSFALG00000012738	LRPPRC	99	55.357	ENSLAFG00000008614	LRPPRC	96	55.357	Loxodonta_africana
ENSFALG00000012738	LRPPRC	99	56.301	ENSMFAG00000041560	LRPPRC	99	59.206	Macaca_fascicularis
ENSFALG00000012738	LRPPRC	99	55.490	ENSMMUG00000019841	LRPPRC	99	58.845	Macaca_mulatta
ENSFALG00000012738	LRPPRC	99	56.450	ENSMNEG00000031613	LRPPRC	95	56.600	Macaca_nemestrina
ENSFALG00000012738	LRPPRC	97	46.366	ENSMAMG00000021835	lrpprc	94	46.884	Mastacembelus_armatus
ENSFALG00000012738	LRPPRC	99	50.594	ENSMZEG00005027379	lrpprc	94	50.594	Maylandia_zebra
ENSFALG00000012738	LRPPRC	99	54.925	ENSMAUG00000012118	Lrpprc	99	54.559	Mesocricetus_auratus
ENSFALG00000012738	LRPPRC	99	57.249	ENSMICG00000010486	LRPPRC	96	57.249	Microcebus_murinus
ENSFALG00000012738	LRPPRC	99	56.358	ENSMOCG00000006048	Lrpprc	95	56.358	Microtus_ochrogaster
ENSFALG00000012738	LRPPRC	94	57.077	ENSMMOG00000007830	lrpprc	93	57.077	Mola_mola
ENSFALG00000012738	LRPPRC	99	57.301	ENSMODG00000000648	LRPPRC	99	57.301	Monodelphis_domestica
ENSFALG00000012738	LRPPRC	98	49.253	ENSMALG00000001271	lrpprc	93	49.253	Monopterus_albus
ENSFALG00000012738	LRPPRC	99	56.315	ENSMPUG00000011800	LRPPRC	96	58.880	Mustela_putorius_furo
ENSFALG00000012738	LRPPRC	99	56.771	ENSMLUG00000010575	LRPPRC	96	56.771	Myotis_lucifugus
ENSFALG00000012738	LRPPRC	99	55.506	ENSNGAG00000013069	Lrpprc	96	55.655	Nannospalax_galili
ENSFALG00000012738	LRPPRC	93	55.765	ENSNBRG00000013202	lrpprc	99	55.765	Neolamprologus_brichardi
ENSFALG00000012738	LRPPRC	99	55.283	ENSNLEG00000016782	LRPPRC	96	55.283	Nomascus_leucogenys
ENSFALG00000012738	LRPPRC	92	50.977	ENSOPRG00000016774	LRPPRC	89	50.977	Ochotona_princeps
ENSFALG00000012738	LRPPRC	99	55.771	ENSODEG00000011211	LRPPRC	96	55.771	Octodon_degus
ENSFALG00000012738	LRPPRC	99	50.522	ENSONIG00000000917	lrpprc	95	50.522	Oreochromis_niloticus
ENSFALG00000012738	LRPPRC	77	51.943	ENSOANG00000014670	-	100	51.943	Ornithorhynchus_anatinus
ENSFALG00000012738	LRPPRC	99	56.696	ENSOCUG00000015046	LRPPRC	92	56.845	Oryctolagus_cuniculus
ENSFALG00000012738	LRPPRC	99	47.784	ENSORLG00000004605	lrpprc	97	46.299	Oryzias_latipes
ENSFALG00000012738	LRPPRC	95	49.845	ENSORLG00020012536	lrpprc	99	49.760	Oryzias_latipes_hni
ENSFALG00000012738	LRPPRC	92	58.716	ENSORLG00015018270	lrpprc	95	58.716	Oryzias_latipes_hsok
ENSFALG00000012738	LRPPRC	99	56.045	ENSOGAG00000012798	LRPPRC	96	56.045	Otolemur_garnettii
ENSFALG00000012738	LRPPRC	99	56.125	ENSOARG00000006522	LRPPRC	96	56.125	Ovis_aries
ENSFALG00000012738	LRPPRC	99	54.882	ENSPPAG00000040876	LRPPRC	96	54.874	Pan_paniscus
ENSFALG00000012738	LRPPRC	99	56.941	ENSPPRG00000006578	LRPPRC	96	56.941	Panthera_pardus
ENSFALG00000012738	LRPPRC	99	56.941	ENSPTIG00000000933	LRPPRC	96	56.941	Panthera_tigris_altaica
ENSFALG00000012738	LRPPRC	99	56.245	ENSPTRG00000011880	LRPPRC	95	56.245	Pan_troglodytes
ENSFALG00000012738	LRPPRC	99	56.161	ENSPANG00000020731	LRPPRC	87	60.300	Papio_anubis
ENSFALG00000012738	LRPPRC	93	53.812	ENSPKIG00000022232	lrpprc	96	53.812	Paramormyrops_kingsleyae
ENSFALG00000012738	LRPPRC	63	63.232	ENSPSIG00000006830	-	98	63.232	Pelodiscus_sinensis
ENSFALG00000012738	LRPPRC	70	42.450	ENSPMGG00000016597	lrpprc	97	42.450	Periophthalmus_magnuspinnatus
ENSFALG00000012738	LRPPRC	97	43.313	ENSPMAG00000002147	lrpprc	99	43.313	Petromyzon_marinus
ENSFALG00000012738	LRPPRC	98	50.263	ENSPFOG00000011227	lrpprc	96	50.225	Poecilia_formosa
ENSFALG00000012738	LRPPRC	98	49.962	ENSPLAG00000004018	lrpprc	94	49.962	Poecilia_latipinna
ENSFALG00000012738	LRPPRC	98	50.263	ENSPMEG00000016425	lrpprc	94	50.263	Poecilia_mexicana
ENSFALG00000012738	LRPPRC	98	50.263	ENSPREG00000003662	lrpprc	94	50.263	Poecilia_reticulata
ENSFALG00000012738	LRPPRC	59	53.540	ENSPPYG00000029532	-	100	53.540	Pongo_abelii
ENSFALG00000012738	LRPPRC	83	56.226	ENSPCAG00000001430	LRPPRC	81	56.226	Procavia_capensis
ENSFALG00000012738	LRPPRC	99	54.417	ENSPVAG00000002007	LRPPRC	96	54.417	Pteropus_vampyrus
ENSFALG00000012738	LRPPRC	98	48.106	ENSPNYG00000000756	lrpprc	95	48.106	Pundamilia_nyererei
ENSFALG00000012738	LRPPRC	99	51.506	ENSPNAG00000002895	lrpprc	95	51.506	Pygocentrus_nattereri
ENSFALG00000012738	LRPPRC	99	55.688	ENSRNOG00000005877	Lrpprc	96	55.762	Rattus_norvegicus
ENSFALG00000012738	LRPPRC	99	55.382	ENSRBIG00000031552	LRPPRC	96	55.531	Rhinopithecus_bieti
ENSFALG00000012738	LRPPRC	99	57.218	ENSSBOG00000011807	LRPPRC	95	57.442	Saimiri_boliviensis_boliviensis
ENSFALG00000012738	LRPPRC	99	56.704	ENSSHAG00000018725	LRPPRC	99	56.704	Sarcophilus_harrisii
ENSFALG00000012738	LRPPRC	99	47.515	ENSSFOG00015001042	lrpprc	94	47.515	Scleropages_formosus
ENSFALG00000012738	LRPPRC	98	50.112	ENSSDUG00000019062	lrpprc	93	50.112	Seriola_dumerili
ENSFALG00000012738	LRPPRC	98	42.803	ENSSLDG00000023028	lrpprc	95	43.139	Seriola_lalandi_dorsalis
ENSFALG00000012738	LRPPRC	90	52.693	ENSSARG00000000426	LRPPRC	99	52.693	Sorex_araneus
ENSFALG00000012738	LRPPRC	99	46.300	ENSSPAG00000000162	lrpprc	95	46.300	Stegastes_partitus
ENSFALG00000012738	LRPPRC	99	56.719	ENSSSCG00000008452	LRPPRC	96	56.719	Sus_scrofa
ENSFALG00000012738	LRPPRC	98	87.129	ENSTGUG00000003759	LRPPRC	100	87.129	Taeniopygia_guttata
ENSFALG00000012738	LRPPRC	90	49.878	ENSTRUG00000008409	lrpprc	91	49.878	Takifugu_rubripes
ENSFALG00000012738	LRPPRC	98	48.317	ENSTNIG00000007470	lrpprc	99	48.140	Tetraodon_nigroviridis
ENSFALG00000012738	LRPPRC	99	54.383	ENSTTRG00000006403	LRPPRC	96	54.383	Tursiops_truncatus
ENSFALG00000012738	LRPPRC	99	54.104	ENSVPAG00000008993	LRPPRC	99	54.104	Vicugna_pacos
ENSFALG00000012738	LRPPRC	99	57.037	ENSXETG00000009296	lrpprc	97	57.333	Xenopus_tropicalis
ENSFALG00000012738	LRPPRC	97	46.491	ENSXCOG00000013343	lrpprc	86	55.093	Xiphophorus_couchianus
ENSFALG00000012738	LRPPRC	98	50.225	ENSXMAG00000018108	lrpprc	94	50.225	Xiphophorus_maculatus