EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000012783 (Gene tree)
Gene ID: -
Gene Symbol: RAB17
Alias: -
Full Name: RAB17%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 6283 bases
Position: chrJH603258.1:188588-194870
Accession: 101810876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000013345	MMR_HSR1	PF01926.23	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000013401	RAB17-201	1316	-	ENSFALP00000013345	213 (aa)	XP_005049014	U3KE91

Gene Model

Click here to download ENSFALG00000012783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000012783's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000012783	RAB17	80	42.778	ENSFALG00000010052	RAB11A	86	42.778
ENSFALG00000012783	RAB17	76	38.650	ENSFALG00000007160	RAB18	78	38.650
ENSFALG00000012783	RAB17	80	35.429	ENSFALG00000007765	RAB30	84	35.429
ENSFALG00000012783	RAB17	80	35.465	ENSFALG00000003867	KRAS	90	35.465
ENSFALG00000012783	RAB17	87	34.872	ENSFALG00000015153	RAB9B	98	35.122
ENSFALG00000012783	RAB17	79	35.593	ENSFALG00000015159	RAB9A	86	35.593
ENSFALG00000012783	RAB17	95	49.282	ENSFALG00000009239	RAB5A	96	49.282
ENSFALG00000012783	RAB17	80	37.791	ENSFALG00000013624	RAB1A	83	37.791
ENSFALG00000012783	RAB17	81	33.149	ENSFALG00000007930	RAB7A	85	33.149
ENSFALG00000012783	RAB17	83	35.196	ENSFALG00000012145	HRAS	94	35.196
ENSFALG00000012783	RAB17	82	34.807	ENSFALG00000007362	RAB36	68	34.807
ENSFALG00000012783	RAB17	56	39.200	ENSFALG00000004409	RAB20	50	39.200
ENSFALG00000012783	RAB17	80	33.516	ENSFALG00000011581	RAB33A	99	32.719
ENSFALG00000012783	RAB17	78	37.427	ENSFALG00000000201	RAB39B	80	37.427
ENSFALG00000012783	RAB17	75	30.488	ENSFALG00000000852	-	77	30.488
ENSFALG00000012783	RAB17	80	38.012	ENSFALG00000005613	RAB2A	99	35.238
ENSFALG00000012783	RAB17	81	34.444	ENSFALG00000003709	RAB19	83	34.444
ENSFALG00000012783	RAB17	92	40.000	ENSFALG00000011828	-	95	40.000
ENSFALG00000012783	RAB17	77	40.964	ENSFALG00000008011	RAB6A	79	40.964
ENSFALG00000012783	RAB17	86	43.085	ENSFALG00000002594	-	80	43.085
ENSFALG00000012783	RAB17	80	44.767	ENSFALG00000002597	RAB25	67	44.767
ENSFALG00000012783	RAB17	88	32.821	ENSFALG00000004886	RAB33B	86	32.821
ENSFALG00000012783	RAB17	91	31.527	ENSFALG00000001205	RAB15	96	31.527
ENSFALG00000012783	RAB17	86	35.829	ENSFALG00000007652	RAB35	93	34.328
ENSFALG00000012783	RAB17	83	33.146	ENSFALG00000003276	-	84	33.146
ENSFALG00000012783	RAB17	75	38.272	ENSFALG00000001373	-	76	38.272

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000012783	RAB17	75	55.000	ENSACIG00000006949	RAB17	70	55.000	Amphilophus_citrinellus
ENSFALG00000012783	RAB17	78	52.096	ENSAOCG00000009167	-	74	52.096	Amphiprion_ocellaris
ENSFALG00000012783	RAB17	78	52.096	ENSAPEG00000002915	RAB17	74	52.096	Amphiprion_percula
ENSFALG00000012783	RAB17	98	59.242	ENSACAG00000004554	RAB17	95	59.242	Anolis_carolinensis
ENSFALG00000012783	RAB17	93	48.077	ENSACLG00000001218	RAB17	89	48.077	Astatotilapia_calliptera
ENSFALG00000012783	RAB17	99	52.830	ENSFCAG00000012724	RAB17	99	52.830	Felis_catus
ENSFALG00000012783	RAB17	99	70.616	ENSGALG00000003899	RAB17	99	70.616	Gallus_gallus
ENSFALG00000012783	RAB17	93	48.077	ENSHBUG00000001462	RAB17	89	48.077	Haplochromis_burtoni
ENSFALG00000012783	RAB17	90	42.157	ENSLBEG00000027691	RAB17	87	42.157	Labrus_bergylta
ENSFALG00000012783	RAB17	93	48.077	ENSMZEG00005013677	RAB17	89	48.077	Maylandia_zebra
ENSFALG00000012783	RAB17	99	72.170	ENSMGAG00000003135	RAB17	98	72.170	Meleagris_gallopavo
ENSFALG00000012783	RAB17	99	53.023	ENSMOCG00000006448	Rab17	99	53.023	Microtus_ochrogaster
ENSFALG00000012783	RAB17	78	52.695	ENSMMOG00000019258	RAB17	74	52.695	Mola_mola
ENSFALG00000012783	RAB17	99	54.460	ENSMODG00000008949	RAB17	99	54.460	Monodelphis_domestica
ENSFALG00000012783	RAB17	75	38.750	ENSMALG00000007905	RAB17	63	38.750	Monopterus_albus
ENSFALG00000012783	RAB17	93	46.154	ENSNBRG00000017793	RAB17	91	46.154	Neolamprologus_brichardi
ENSFALG00000012783	RAB17	83	61.364	ENSMEUG00000005002	RAB17	100	61.364	Notamacropus_eugenii
ENSFALG00000012783	RAB17	79	54.762	ENSONIG00000016776	RAB17	86	58.333	Oreochromis_niloticus
ENSFALG00000012783	RAB17	91	55.155	ENSPPRG00000003974	RAB17	91	55.155	Panthera_pardus
ENSFALG00000012783	RAB17	96	53.171	ENSPTIG00000014452	RAB17	94	53.171	Panthera_tigris_altaica
ENSFALG00000012783	RAB17	97	67.143	ENSPSIG00000016995	RAB17	87	67.143	Pelodiscus_sinensis
ENSFALG00000012783	RAB17	86	62.162	ENSPCIG00000021558	-	64	62.162	Phascolarctos_cinereus
ENSFALG00000012783	RAB17	93	48.077	ENSPNYG00000011135	RAB17	89	48.077	Pundamilia_nyererei
ENSFALG00000012783	RAB17	99	58.216	ENSSHAG00000009306	RAB17	99	58.216	Sarcophilus_harrisii
ENSFALG00000012783	RAB17	79	49.112	ENSSDUG00000006618	RAB17	74	49.112	Seriola_dumerili
ENSFALG00000012783	RAB17	78	49.701	ENSSLDG00000020918	RAB17	74	49.701	Seriola_lalandi_dorsalis
ENSFALG00000012783	RAB17	58	77.419	ENSSPUG00000015409	RAB17	57	77.419	Sphenodon_punctatus
ENSFALG00000012783	RAB17	78	50.299	ENSSPAG00000022624	-	75	50.299	Stegastes_partitus
ENSFALG00000012783	RAB17	99	86.256	ENSTGUG00000003786	RAB17	100	86.256	Taeniopygia_guttata