EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000012940 (Gene tree)
Gene ID: -
Gene Symbol: STAU1
Alias: PPP1R150|STAU
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 23857 bases
Position: chrJH603297.1:397587-421443
Accession: 101807663
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000013506	dsrm	PF00035.26	1.3e-48	1	4
ENSFALP00000013506	dsrm	PF00035.26	1.3e-48	2	4
ENSFALP00000013506	dsrm	PF00035.26	1.3e-48	3	4
ENSFALP00000013506	dsrm	PF00035.26	1.3e-48	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000013562	STAU1-201	5937	-	ENSFALP00000013506	690 (aa)	XP_005057511	U3KEQ2

Gene Model

Click here to download ENSFALG00000012940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000012940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000012940	STAU1	93	50.810	ENSFALG00000008552	STAU2	93	51.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000012940	STAU1	96	87.549	ENSG00000124214	STAU1	99	87.627	Homo_sapiens
ENSFALG00000012940	STAU1	97	73.077	ENSAPOG00000017260	stau1	99	71.714	Acanthochromis_polyacanthus
ENSFALG00000012940	STAU1	99	84.827	ENSAMEG00000013681	STAU1	99	84.827	Ailuropoda_melanoleuca
ENSFALG00000012940	STAU1	100	72.557	ENSACIG00000015918	stau1	99	73.171	Amphilophus_citrinellus
ENSFALG00000012940	STAU1	100	72.753	ENSAOCG00000012224	stau1	99	72.857	Amphiprion_ocellaris
ENSFALG00000012940	STAU1	100	72.896	ENSAPEG00000012308	stau1	99	73.000	Amphiprion_percula
ENSFALG00000012940	STAU1	100	73.219	ENSATEG00000024600	stau1	99	74.146	Anabas_testudineus
ENSFALG00000012940	STAU1	100	93.539	ENSAPLG00000010527	STAU1	100	93.539	Anas_platyrhynchos
ENSFALG00000012940	STAU1	100	91.667	ENSACAG00000015909	STAU1	99	91.667	Anolis_carolinensis
ENSFALG00000012940	STAU1	96	86.328	ENSANAG00000032714	STAU1	99	86.328	Aotus_nancymaae
ENSFALG00000012940	STAU1	100	73.000	ENSACLG00000012270	stau1	99	72.961	Astatotilapia_calliptera
ENSFALG00000012940	STAU1	75	75.769	ENSAMXG00000016812	stau1	90	75.769	Astyanax_mexicanus
ENSFALG00000012940	STAU1	96	86.561	ENSBTAG00000000241	STAU1	99	86.561	Bos_taurus
ENSFALG00000012940	STAU1	96	87.352	ENSCJAG00000016233	STAU1	99	87.352	Callithrix_jacchus
ENSFALG00000012940	STAU1	96	86.885	ENSCAFG00000011347	STAU1	99	86.885	Canis_familiaris
ENSFALG00000012940	STAU1	96	86.885	ENSCAFG00020017123	STAU1	99	86.899	Canis_lupus_dingo
ENSFALG00000012940	STAU1	96	86.759	ENSCHIG00000001799	-	99	86.759	Capra_hircus
ENSFALG00000012940	STAU1	96	85.968	ENSTSYG00000036179	-	99	85.968	Carlito_syrichta
ENSFALG00000012940	STAU1	71	83.570	ENSCAPG00000017041	STAU1	99	83.570	Cavia_aperea
ENSFALG00000012940	STAU1	70	82.317	ENSCPOG00000005566	STAU1	99	82.317	Cavia_porcellus
ENSFALG00000012940	STAU1	96	86.523	ENSCCAG00000034339	STAU1	99	86.523	Cebus_capucinus
ENSFALG00000012940	STAU1	96	87.549	ENSCATG00000028474	STAU1	99	87.549	Cercocebus_atys
ENSFALG00000012940	STAU1	70	85.976	ENSCLAG00000006516	-	99	85.976	Chinchilla_lanigera
ENSFALG00000012940	STAU1	71	70.325	ENSCLAG00000002784	-	99	70.122	Chinchilla_lanigera
ENSFALG00000012940	STAU1	71	87.424	ENSCSAG00000014986	STAU1	99	87.424	Chlorocebus_sabaeus
ENSFALG00000012940	STAU1	96	88.166	ENSCHOG00000001511	STAU1	99	88.166	Choloepus_hoffmanni
ENSFALG00000012940	STAU1	100	94.253	ENSCPBG00000026741	STAU1	100	94.253	Chrysemys_picta_bellii
ENSFALG00000012940	STAU1	96	87.352	ENSCANG00000039220	STAU1	99	87.352	Colobus_angolensis_palliatus
ENSFALG00000012940	STAU1	84	81.301	ENSCGRG00001013453	Stau1	99	81.301	Cricetulus_griseus_chok1gshd
ENSFALG00000012940	STAU1	84	81.301	ENSCGRG00000007216	Stau1	99	81.301	Cricetulus_griseus_crigri
ENSFALG00000012940	STAU1	99	65.960	ENSCSEG00000000792	stau1	99	66.761	Cynoglossus_semilaevis
ENSFALG00000012940	STAU1	96	71.456	ENSCVAG00000005906	stau1	99	72.190	Cyprinodon_variegatus
ENSFALG00000012940	STAU1	100	72.961	ENSDARG00000044182	stau1	100	75.078	Danio_rerio
ENSFALG00000012940	STAU1	96	87.968	ENSDNOG00000014933	STAU1	96	87.968	Dasypus_novemcinctus
ENSFALG00000012940	STAU1	70	82.305	ENSDORG00000030220	Stau1	99	82.305	Dipodomys_ordii
ENSFALG00000012940	STAU1	72	86.000	ENSETEG00000018235	STAU1	86	86.000	Echinops_telfairi
ENSFALG00000012940	STAU1	96	87.034	ENSEASG00005023343	STAU1	100	87.034	Equus_asinus_asinus
ENSFALG00000012940	STAU1	96	88.102	ENSECAG00000012894	STAU1	99	88.102	Equus_caballus
ENSFALG00000012940	STAU1	93	90.625	ENSEEUG00000014344	STAU1	79	90.625	Erinaceus_europaeus
ENSFALG00000012940	STAU1	100	71.669	ENSELUG00000002529	stau1	99	74.611	Esox_lucius
ENSFALG00000012940	STAU1	96	86.736	ENSFCAG00000001447	STAU1	99	87.549	Felis_catus
ENSFALG00000012940	STAU1	71	67.343	ENSFDAG00000020837	-	99	66.126	Fukomys_damarensis
ENSFALG00000012940	STAU1	70	84.553	ENSFDAG00000014119	-	99	84.553	Fukomys_damarensis
ENSFALG00000012940	STAU1	100	71.795	ENSFHEG00000013517	stau1	100	71.795	Fundulus_heteroclitus
ENSFALG00000012940	STAU1	100	63.649	ENSGMOG00000016850	stau1	100	63.649	Gadus_morhua
ENSFALG00000012940	STAU1	100	96.522	ENSGALG00000004736	STAU1	100	96.522	Gallus_gallus
ENSFALG00000012940	STAU1	97	73.855	ENSGAFG00000010437	stau1	100	72.468	Gambusia_affinis
ENSFALG00000012940	STAU1	100	71.960	ENSGACG00000001352	stau1	99	72.206	Gasterosteus_aculeatus
ENSFALG00000012940	STAU1	100	94.928	ENSGAGG00000009825	STAU1	100	94.928	Gopherus_agassizii
ENSFALG00000012940	STAU1	96	81.748	ENSGGOG00000025351	STAU1	99	90.331	Gorilla_gorilla
ENSFALG00000012940	STAU1	100	73.143	ENSHBUG00000023668	stau1	99	73.104	Haplochromis_burtoni
ENSFALG00000012940	STAU1	70	86.831	ENSHGLG00000008730	STAU1	99	86.831	Heterocephalus_glaber_female
ENSFALG00000012940	STAU1	70	86.831	ENSHGLG00100000098	STAU1	99	86.831	Heterocephalus_glaber_male
ENSFALG00000012940	STAU1	97	71.513	ENSHCOG00000018461	stau1	99	70.714	Hippocampus_comes
ENSFALG00000012940	STAU1	99	70.749	ENSIPUG00000023725	stau1	99	70.749	Ictalurus_punctatus
ENSFALG00000012940	STAU1	70	85.391	ENSSTOG00000003634	STAU1	99	85.391	Ictidomys_tridecemlineatus
ENSFALG00000012940	STAU1	70	84.156	ENSJJAG00000020032	Stau1	99	84.156	Jaculus_jaculus
ENSFALG00000012940	STAU1	97	72.296	ENSKMAG00000007135	stau1	97	72.821	Kryptolebias_marmoratus
ENSFALG00000012940	STAU1	100	70.922	ENSLBEG00000020172	stau1	100	70.922	Labrus_bergylta
ENSFALG00000012940	STAU1	98	85.694	ENSLACG00000016157	STAU1	97	85.694	Latimeria_chalumnae
ENSFALG00000012940	STAU1	100	79.107	ENSLOCG00000003134	stau1	100	79.137	Lepisosteus_oculatus
ENSFALG00000012940	STAU1	73	87.549	ENSLAFG00000003238	STAU1	99	87.549	Loxodonta_africana
ENSFALG00000012940	STAU1	96	87.549	ENSMFAG00000040931	STAU1	99	90.335	Macaca_fascicularis
ENSFALG00000012940	STAU1	96	81.942	ENSMMUG00000002302	STAU1	99	90.335	Macaca_mulatta
ENSFALG00000012940	STAU1	96	87.549	ENSMNEG00000033821	STAU1	99	87.549	Macaca_nemestrina
ENSFALG00000012940	STAU1	96	87.747	ENSMLEG00000031383	STAU1	99	87.747	Mandrillus_leucophaeus
ENSFALG00000012940	STAU1	100	73.181	ENSMAMG00000017586	stau1	99	74.107	Mastacembelus_armatus
ENSFALG00000012940	STAU1	100	73.104	ENSMZEG00005015605	stau1	99	73.066	Maylandia_zebra
ENSFALG00000012940	STAU1	100	93.399	ENSMGAG00000004719	STAU1	100	93.399	Meleagris_gallopavo
ENSFALG00000012940	STAU1	84	81.504	ENSMAUG00000013846	Stau1	99	81.504	Mesocricetus_auratus
ENSFALG00000012940	STAU1	96	84.961	ENSMICG00000001995	STAU1	99	84.961	Microcebus_murinus
ENSFALG00000012940	STAU1	70	82.546	ENSMOCG00000018743	Stau1	99	82.317	Microtus_ochrogaster
ENSFALG00000012940	STAU1	97	70.858	ENSMMOG00000015455	stau1	99	75.610	Mola_mola
ENSFALG00000012940	STAU1	96	92.492	ENSMODG00000016276	STAU1	99	92.492	Monodelphis_domestica
ENSFALG00000012940	STAU1	99	73.286	ENSMALG00000000045	stau1	99	73.286	Monopterus_albus
ENSFALG00000012940	STAU1	70	82.851	MGP_CAROLIEiJ_G0024699	Stau1	100	82.680	Mus_caroli
ENSFALG00000012940	STAU1	70	82.645	ENSMUSG00000039536	Stau1	100	82.474	Mus_musculus
ENSFALG00000012940	STAU1	70	82.510	MGP_PahariEiJ_G0026141	Stau1	99	82.510	Mus_pahari
ENSFALG00000012940	STAU1	70	82.645	MGP_SPRETEiJ_G0025619	Stau1	99	82.645	Mus_spretus
ENSFALG00000012940	STAU1	96	87.179	ENSMPUG00000017581	STAU1	99	87.179	Mustela_putorius_furo
ENSFALG00000012940	STAU1	96	82.674	ENSMLUG00000008407	STAU1	96	86.166	Myotis_lucifugus
ENSFALG00000012940	STAU1	70	84.553	ENSNGAG00000007108	Stau1	99	84.553	Nannospalax_galili
ENSFALG00000012940	STAU1	100	73.000	ENSNBRG00000017596	stau1	99	73.104	Neolamprologus_brichardi
ENSFALG00000012940	STAU1	96	86.957	ENSNLEG00000006955	STAU1	99	86.957	Nomascus_leucogenys
ENSFALG00000012940	STAU1	76	93.682	ENSMEUG00000003263	STAU1	91	93.682	Notamacropus_eugenii
ENSFALG00000012940	STAU1	96	83.004	ENSOPRG00000014569	STAU1	99	83.004	Ochotona_princeps
ENSFALG00000012940	STAU1	71	86.207	ENSODEG00000006523	STAU1	99	86.410	Octodon_degus
ENSFALG00000012940	STAU1	100	71.488	ENSONIG00000004152	stau1	98	71.588	Oreochromis_niloticus
ENSFALG00000012940	STAU1	99	88.522	ENSOANG00000006394	STAU1	99	88.522	Ornithorhynchus_anatinus
ENSFALG00000012940	STAU1	96	84.980	ENSOCUG00000006214	STAU1	99	84.980	Oryctolagus_cuniculus
ENSFALG00000012940	STAU1	100	70.798	ENSOMEG00000002388	stau1	100	70.798	Oryzias_melastigma
ENSFALG00000012940	STAU1	96	86.166	ENSOGAG00000002127	STAU1	96	86.166	Otolemur_garnettii
ENSFALG00000012940	STAU1	71	58.824	ENSOGAG00000028222	-	98	58.824	Otolemur_garnettii
ENSFALG00000012940	STAU1	96	87.199	ENSOARG00000012204	STAU1	99	87.199	Ovis_aries
ENSFALG00000012940	STAU1	96	81.748	ENSPPAG00000032023	STAU1	99	90.331	Pan_paniscus
ENSFALG00000012940	STAU1	96	83.992	ENSPPRG00000003436	STAU1	99	87.627	Panthera_pardus
ENSFALG00000012940	STAU1	96	83.992	ENSPTIG00000011768	STAU1	99	87.549	Panthera_tigris_altaica
ENSFALG00000012940	STAU1	96	81.748	ENSPTRG00000023130	STAU1	99	90.331	Pan_troglodytes
ENSFALG00000012940	STAU1	96	87.352	ENSPANG00000020560	STAU1	99	87.352	Papio_anubis
ENSFALG00000012940	STAU1	99	74.714	ENSPKIG00000024588	stau1	99	74.714	Paramormyrops_kingsleyae
ENSFALG00000012940	STAU1	100	94.493	ENSPSIG00000010731	STAU1	99	94.493	Pelodiscus_sinensis
ENSFALG00000012940	STAU1	100	72.493	ENSPMGG00000018553	stau1	99	73.684	Periophthalmus_magnuspinnatus
ENSFALG00000012940	STAU1	70	82.114	ENSPEMG00000022045	Stau1	99	82.114	Peromyscus_maniculatus_bairdii
ENSFALG00000012940	STAU1	99	90.086	ENSPCIG00000023269	STAU1	100	90.677	Phascolarctos_cinereus
ENSFALG00000012940	STAU1	100	72.688	ENSPFOG00000017253	stau1	100	72.688	Poecilia_formosa
ENSFALG00000012940	STAU1	57	74.937	ENSPLAG00000014829	stau1	97	71.318	Poecilia_latipinna
ENSFALG00000012940	STAU1	100	69.417	ENSPMEG00000007495	stau1	100	69.417	Poecilia_mexicana
ENSFALG00000012940	STAU1	100	72.404	ENSPREG00000003477	stau1	100	72.404	Poecilia_reticulata
ENSFALG00000012940	STAU1	96	87.154	ENSPPYG00000011111	STAU1	99	87.154	Pongo_abelii
ENSFALG00000012940	STAU1	87	79.622	ENSPCAG00000002459	STAU1	99	79.622	Procavia_capensis
ENSFALG00000012940	STAU1	96	85.968	ENSPCOG00000027746	STAU1	99	85.968	Propithecus_coquereli
ENSFALG00000012940	STAU1	79	89.333	ENSPVAG00000015019	STAU1	85	89.333	Pteropus_vampyrus
ENSFALG00000012940	STAU1	100	73.143	ENSPNYG00000014436	stau1	99	73.104	Pundamilia_nyererei
ENSFALG00000012940	STAU1	100	71.000	ENSPNAG00000011323	stau1	99	72.286	Pygocentrus_nattereri
ENSFALG00000012940	STAU1	70	81.911	ENSRNOG00000007781	Stau1	99	81.911	Rattus_norvegicus
ENSFALG00000012940	STAU1	71	86.895	ENSRBIG00000037345	STAU1	100	86.895	Rhinopithecus_bieti
ENSFALG00000012940	STAU1	96	87.549	ENSRROG00000039008	STAU1	99	87.549	Rhinopithecus_roxellana
ENSFALG00000012940	STAU1	96	86.523	ENSSBOG00000034448	STAU1	99	86.523	Saimiri_boliviensis_boliviensis
ENSFALG00000012940	STAU1	96	92.793	ENSSHAG00000009492	STAU1	99	92.793	Sarcophilus_harrisii
ENSFALG00000012940	STAU1	99	75.501	ENSSFOG00015021497	stau1	99	75.501	Scleropages_formosus
ENSFALG00000012940	STAU1	100	72.468	ENSSMAG00000017410	stau1	99	72.896	Scophthalmus_maximus
ENSFALG00000012940	STAU1	100	73.039	ENSSDUG00000019439	stau1	99	73.143	Seriola_dumerili
ENSFALG00000012940	STAU1	97	74.408	ENSSLDG00000025040	stau1	99	73.000	Seriola_lalandi_dorsalis
ENSFALG00000012940	STAU1	52	89.286	ENSSARG00000010389	-	62	89.286	Sorex_araneus
ENSFALG00000012940	STAU1	100	93.678	ENSSPUG00000017983	STAU1	99	94.311	Sphenodon_punctatus
ENSFALG00000012940	STAU1	97	74.260	ENSSPAG00000019275	stau1	99	72.857	Stegastes_partitus
ENSFALG00000012940	STAU1	96	87.154	ENSSSCG00000027444	STAU1	99	87.752	Sus_scrofa
ENSFALG00000012940	STAU1	100	94.398	ENSTGUG00000008784	STAU1	100	94.398	Taeniopygia_guttata
ENSFALG00000012940	STAU1	97	73.512	ENSTRUG00000005837	stau1	99	72.286	Takifugu_rubripes
ENSFALG00000012940	STAU1	96	72.741	ENSTNIG00000014732	stau1	99	72.741	Tetraodon_nigroviridis
ENSFALG00000012940	STAU1	89	80.244	ENSTBEG00000009404	STAU1	99	74.753	Tupaia_belangeri
ENSFALG00000012940	STAU1	75	90.625	ENSTTRG00000004285	STAU1	91	90.625	Tursiops_truncatus
ENSFALG00000012940	STAU1	71	85.600	ENSUAMG00000025449	STAU1	99	85.600	Ursus_americanus
ENSFALG00000012940	STAU1	54	83.333	ENSUMAG00000024475	STAU1	89	83.333	Ursus_maritimus
ENSFALG00000012940	STAU1	96	87.154	ENSVPAG00000001313	STAU1	99	87.154	Vicugna_pacos
ENSFALG00000012940	STAU1	96	87.034	ENSVVUG00000022325	STAU1	99	87.034	Vulpes_vulpes
ENSFALG00000012940	STAU1	100	84.870	ENSXETG00000001783	stau1	99	84.150	Xenopus_tropicalis
ENSFALG00000012940	STAU1	53	74.595	ENSXCOG00000008804	stau1	94	75.135	Xiphophorus_couchianus
ENSFALG00000012940	STAU1	100	72.063	ENSXMAG00000016175	stau1	100	72.063	Xiphophorus_maculatus