EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000012950 (Gene tree)
Gene ID: -
Gene Symbol: POLR1E
Alias: FLJ13390|FLJ13970|PAF53|PRAF1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 14582 bases
Position: chrJH603343.1:951472-966053
Accession: 17631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000013533	RNA_pol_I_A49	PF06870.12	2.7e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000013589	POLR1E-201	3502	-	ENSFALP00000013533	397 (aa)	-	U3KES9

Gene Model

Click here to download ENSFALG00000012950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000012950's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000012950	POLR1E	99	60.152	ENSG00000137054	POLR1E	94	60.051	Homo_sapiens
ENSFALG00000012950	POLR1E	99	43.672	ENSAPOG00000012452	polr1e	95	43.672	Acanthochromis_polyacanthus
ENSFALG00000012950	POLR1E	99	56.364	ENSAMEG00000010193	POLR1E	92	56.364	Ailuropoda_melanoleuca
ENSFALG00000012950	POLR1E	98	44.670	ENSACIG00000009884	polr1e	99	44.670	Amphilophus_citrinellus
ENSFALG00000012950	POLR1E	99	45.906	ENSAOCG00000005665	polr1e	95	45.906	Amphiprion_ocellaris
ENSFALG00000012950	POLR1E	99	46.154	ENSAPEG00000020581	polr1e	95	46.154	Amphiprion_percula
ENSFALG00000012950	POLR1E	99	46.766	ENSATEG00000020609	polr1e	95	46.766	Anabas_testudineus
ENSFALG00000012950	POLR1E	84	72.703	ENSAPLG00000010340	POLR1E	100	72.703	Anas_platyrhynchos
ENSFALG00000012950	POLR1E	99	59.898	ENSANAG00000038046	POLR1E	94	59.796	Aotus_nancymaae
ENSFALG00000012950	POLR1E	99	45.250	ENSACLG00000013685	polr1e	94	45.250	Astatotilapia_calliptera
ENSFALG00000012950	POLR1E	99	41.750	ENSAMXG00000018181	polr1e	95	41.750	Astyanax_mexicanus
ENSFALG00000012950	POLR1E	99	60.705	ENSBTAG00000012243	POLR1E	95	60.705	Bos_taurus
ENSFALG00000012950	POLR1E	99	56.599	ENSCJAG00000010512	POLR1E	92	59.299	Callithrix_jacchus
ENSFALG00000012950	POLR1E	99	61.929	ENSCAFG00000002377	POLR1E	94	61.832	Canis_familiaris
ENSFALG00000012950	POLR1E	99	62.087	ENSCAFG00020017851	POLR1E	94	62.087	Canis_lupus_dingo
ENSFALG00000012950	POLR1E	99	60.705	ENSCHIG00000019479	POLR1E	95	60.705	Capra_hircus
ENSFALG00000012950	POLR1E	99	59.796	ENSTSYG00000002075	POLR1E	94	59.796	Carlito_syrichta
ENSFALG00000012950	POLR1E	73	62.500	ENSCAPG00000015653	POLR1E	99	62.500	Cavia_aperea
ENSFALG00000012950	POLR1E	99	62.087	ENSCPOG00000009965	POLR1E	94	62.087	Cavia_porcellus
ENSFALG00000012950	POLR1E	99	54.847	ENSCCAG00000029460	POLR1E	93	54.847	Cebus_capucinus
ENSFALG00000012950	POLR1E	99	60.051	ENSCATG00000031732	POLR1E	92	62.366	Cercocebus_atys
ENSFALG00000012950	POLR1E	85	64.118	ENSCLAG00000012701	POLR1E	89	64.118	Chinchilla_lanigera
ENSFALG00000012950	POLR1E	99	59.796	ENSCSAG00000010782	POLR1E	94	59.796	Chlorocebus_sabaeus
ENSFALG00000012950	POLR1E	99	55.330	ENSCHOG00000013024	POLR1E	83	55.330	Choloepus_hoffmanni
ENSFALG00000012950	POLR1E	99	72.727	ENSCPBG00000006923	POLR1E	96	72.727	Chrysemys_picta_bellii
ENSFALG00000012950	POLR1E	99	60.660	ENSCANG00000036112	POLR1E	92	63.441	Colobus_angolensis_palliatus
ENSFALG00000012950	POLR1E	99	58.629	ENSCGRG00001006197	Polr1e	91	58.629	Cricetulus_griseus_chok1gshd
ENSFALG00000012950	POLR1E	99	58.122	ENSCGRG00000006430	Polr1e	91	58.122	Cricetulus_griseus_crigri
ENSFALG00000012950	POLR1E	98	43.687	ENSCSEG00000005121	polr1e	96	43.687	Cynoglossus_semilaevis
ENSFALG00000012950	POLR1E	99	43.467	ENSCVAG00000019759	polr1e	95	43.467	Cyprinodon_variegatus
ENSFALG00000012950	POLR1E	95	43.081	ENSDARG00000006434	polr1e	95	42.356	Danio_rerio
ENSFALG00000012950	POLR1E	99	53.394	ENSDNOG00000010257	POLR1E	94	53.394	Dasypus_novemcinctus
ENSFALG00000012950	POLR1E	89	59.270	ENSETEG00000018204	POLR1E	99	59.270	Echinops_telfairi
ENSFALG00000012950	POLR1E	58	38.346	ENSEBUG00000010635	-	80	38.346	Eptatretus_burgeri
ENSFALG00000012950	POLR1E	99	61.578	ENSEASG00005000675	POLR1E	94	61.578	Equus_asinus_asinus
ENSFALG00000012950	POLR1E	99	61.578	ENSECAG00000014669	POLR1E	94	61.578	Equus_caballus
ENSFALG00000012950	POLR1E	99	51.015	ENSEEUG00000011928	POLR1E	84	51.015	Erinaceus_europaeus
ENSFALG00000012950	POLR1E	99	44.051	ENSELUG00000008150	polr1e	94	44.051	Esox_lucius
ENSFALG00000012950	POLR1E	99	61.421	ENSFCAG00000013081	POLR1E	94	61.323	Felis_catus
ENSFALG00000012950	POLR1E	99	59.747	ENSFDAG00000016917	POLR1E	94	59.747	Fukomys_damarensis
ENSFALG00000012950	POLR1E	99	43.687	ENSFHEG00000009801	polr1e	95	43.687	Fundulus_heteroclitus
ENSFALG00000012950	POLR1E	96	37.209	ENSGMOG00000003336	POLR1E	91	37.209	Gadus_morhua
ENSFALG00000012950	POLR1E	99	81.425	ENSGALG00000005395	POLR1E	95	81.425	Gallus_gallus
ENSFALG00000012950	POLR1E	99	41.709	ENSGAFG00000004850	polr1e	95	41.709	Gambusia_affinis
ENSFALG00000012950	POLR1E	99	41.832	ENSGACG00000016087	polr1e	95	41.832	Gasterosteus_aculeatus
ENSFALG00000012950	POLR1E	99	61.869	ENSGAGG00000001659	POLR1E	97	61.735	Gopherus_agassizii
ENSFALG00000012950	POLR1E	99	60.152	ENSGGOG00000001882	POLR1E	92	62.366	Gorilla_gorilla
ENSFALG00000012950	POLR1E	99	45.137	ENSHBUG00000002559	polr1e	94	45.137	Haplochromis_burtoni
ENSFALG00000012950	POLR1E	99	60.051	ENSHGLG00000002036	POLR1E	94	60.051	Heterocephalus_glaber_female
ENSFALG00000012950	POLR1E	99	60.305	ENSHGLG00100012784	POLR1E	94	60.305	Heterocephalus_glaber_male
ENSFALG00000012950	POLR1E	99	44.584	ENSHCOG00000002774	polr1e	95	44.584	Hippocampus_comes
ENSFALG00000012950	POLR1E	99	40.955	ENSIPUG00000003019	polr1e	95	40.955	Ictalurus_punctatus
ENSFALG00000012950	POLR1E	99	61.323	ENSSTOG00000009810	POLR1E	94	61.323	Ictidomys_tridecemlineatus
ENSFALG00000012950	POLR1E	99	60.560	ENSJJAG00000020731	Polr1e	91	60.560	Jaculus_jaculus
ENSFALG00000012950	POLR1E	99	42.643	ENSKMAG00000000046	polr1e	95	42.643	Kryptolebias_marmoratus
ENSFALG00000012950	POLR1E	99	46.429	ENSLBEG00000003104	polr1e	94	46.429	Labrus_bergylta
ENSFALG00000012950	POLR1E	90	56.944	ENSLACG00000003416	POLR1E	99	56.944	Latimeria_chalumnae
ENSFALG00000012950	POLR1E	99	49.747	ENSLOCG00000012859	polr1e	94	49.373	Lepisosteus_oculatus
ENSFALG00000012950	POLR1E	99	61.069	ENSLAFG00000012831	POLR1E	93	61.069	Loxodonta_africana
ENSFALG00000012950	POLR1E	99	60.051	ENSMFAG00000045465	POLR1E	92	62.366	Macaca_fascicularis
ENSFALG00000012950	POLR1E	99	60.051	ENSMMUG00000017892	POLR1E	92	62.366	Macaca_mulatta
ENSFALG00000012950	POLR1E	99	55.087	ENSMNEG00000040283	POLR1E	92	58.874	Macaca_nemestrina
ENSFALG00000012950	POLR1E	99	60.051	ENSMLEG00000031135	POLR1E	92	62.366	Mandrillus_leucophaeus
ENSFALG00000012950	POLR1E	99	43.687	ENSMAMG00000001260	polr1e	94	43.687	Mastacembelus_armatus
ENSFALG00000012950	POLR1E	99	45.500	ENSMZEG00005021536	polr1e	94	45.500	Maylandia_zebra
ENSFALG00000012950	POLR1E	99	59.033	ENSMAUG00000021044	Polr1e	91	59.033	Mesocricetus_auratus
ENSFALG00000012950	POLR1E	99	61.929	ENSMICG00000003673	POLR1E	94	61.832	Microcebus_murinus
ENSFALG00000012950	POLR1E	99	59.391	ENSMOCG00000012920	Polr1e	91	59.391	Microtus_ochrogaster
ENSFALG00000012950	POLR1E	99	43.939	ENSMMOG00000007391	polr1e	97	43.939	Mola_mola
ENSFALG00000012950	POLR1E	98	63.265	ENSMODG00000002884	POLR1E	95	63.265	Monodelphis_domestica
ENSFALG00000012950	POLR1E	99	45.274	ENSMALG00000002665	polr1e	94	45.274	Monopterus_albus
ENSFALG00000012950	POLR1E	99	56.853	MGP_CAROLIEiJ_G0025967	Polr1e	97	56.853	Mus_caroli
ENSFALG00000012950	POLR1E	99	57.215	ENSMUSG00000028318	Polr1e	97	57.215	Mus_musculus
ENSFALG00000012950	POLR1E	99	58.122	MGP_PahariEiJ_G0024114	Polr1e	97	58.122	Mus_pahari
ENSFALG00000012950	POLR1E	99	56.456	MGP_SPRETEiJ_G0026930	Polr1e	97	56.456	Mus_spretus
ENSFALG00000012950	POLR1E	99	55.756	ENSMPUG00000006040	POLR1E	94	55.756	Mustela_putorius_furo
ENSFALG00000012950	POLR1E	99	60.560	ENSMLUG00000012688	POLR1E	91	60.560	Myotis_lucifugus
ENSFALG00000012950	POLR1E	99	60.051	ENSNGAG00000002520	Polr1e	91	60.051	Nannospalax_galili
ENSFALG00000012950	POLR1E	99	45.750	ENSNBRG00000016822	polr1e	94	45.750	Neolamprologus_brichardi
ENSFALG00000012950	POLR1E	99	59.645	ENSNLEG00000003616	POLR1E	92	62.366	Nomascus_leucogenys
ENSFALG00000012950	POLR1E	77	66.250	ENSMEUG00000015372	-	80	66.250	Notamacropus_eugenii
ENSFALG00000012950	POLR1E	90	55.153	ENSOPRG00000014206	POLR1E	99	55.153	Ochotona_princeps
ENSFALG00000012950	POLR1E	99	61.772	ENSODEG00000014565	POLR1E	91	61.772	Octodon_degus
ENSFALG00000012950	POLR1E	99	46.269	ENSONIG00000008921	polr1e	94	46.000	Oreochromis_niloticus
ENSFALG00000012950	POLR1E	99	63.359	ENSOCUG00000024773	POLR1E	94	63.359	Oryctolagus_cuniculus
ENSFALG00000012950	POLR1E	99	43.970	ENSORLG00000005143	polr1e	95	43.970	Oryzias_latipes
ENSFALG00000012950	POLR1E	99	41.058	ENSORLG00020007271	polr1e	99	42.711	Oryzias_latipes_hni
ENSFALG00000012950	POLR1E	99	43.970	ENSORLG00015000137	polr1e	95	43.970	Oryzias_latipes_hsok
ENSFALG00000012950	POLR1E	99	44.472	ENSOMEG00000013264	polr1e	93	44.472	Oryzias_melastigma
ENSFALG00000012950	POLR1E	99	61.323	ENSOGAG00000012981	POLR1E	92	61.323	Otolemur_garnettii
ENSFALG00000012950	POLR1E	99	60.705	ENSOARG00000011465	POLR1E	91	60.705	Ovis_aries
ENSFALG00000012950	POLR1E	99	59.898	ENSPPAG00000034566	POLR1E	92	62.366	Pan_paniscus
ENSFALG00000012950	POLR1E	99	61.323	ENSPPRG00000005649	POLR1E	94	61.323	Panthera_pardus
ENSFALG00000012950	POLR1E	99	61.578	ENSPTIG00000009774	POLR1E	94	61.578	Panthera_tigris_altaica
ENSFALG00000012950	POLR1E	99	59.898	ENSPTRG00000020944	POLR1E	92	62.366	Pan_troglodytes
ENSFALG00000012950	POLR1E	99	60.051	ENSPANG00000025563	POLR1E	92	62.366	Papio_anubis
ENSFALG00000012950	POLR1E	99	45.771	ENSPKIG00000003562	polr1e	95	45.771	Paramormyrops_kingsleyae
ENSFALG00000012950	POLR1E	99	67.602	ENSPSIG00000003274	POLR1E	92	67.602	Pelodiscus_sinensis
ENSFALG00000012950	POLR1E	99	44.361	ENSPMGG00000024169	polr1e	95	44.361	Periophthalmus_magnuspinnatus
ENSFALG00000012950	POLR1E	99	47.208	ENSPEMG00000022300	-	90	47.208	Peromyscus_maniculatus_bairdii
ENSFALG00000012950	POLR1E	99	59.137	ENSPEMG00000019151	-	91	59.137	Peromyscus_maniculatus_bairdii
ENSFALG00000012950	POLR1E	95	64.567	ENSPCIG00000014798	POLR1E	93	64.567	Phascolarctos_cinereus
ENSFALG00000012950	POLR1E	99	41.608	ENSPFOG00000019627	polr1e	94	41.608	Poecilia_formosa
ENSFALG00000012950	POLR1E	99	43.890	ENSPLAG00000022679	polr1e	95	43.890	Poecilia_latipinna
ENSFALG00000012950	POLR1E	90	43.443	ENSPMEG00000022123	polr1e	93	43.443	Poecilia_mexicana
ENSFALG00000012950	POLR1E	99	42.079	ENSPREG00000009470	polr1e	96	42.079	Poecilia_reticulata
ENSFALG00000012950	POLR1E	99	59.288	ENSPPYG00000019061	POLR1E	94	59.288	Pongo_abelii
ENSFALG00000012950	POLR1E	59	58.723	ENSPCAG00000004891	POLR1E	77	58.723	Procavia_capensis
ENSFALG00000012950	POLR1E	99	61.111	ENSPCOG00000027448	POLR1E	94	61.069	Propithecus_coquereli
ENSFALG00000012950	POLR1E	99	61.421	ENSPVAG00000007940	POLR1E	83	61.421	Pteropus_vampyrus
ENSFALG00000012950	POLR1E	99	45.500	ENSPNYG00000001032	polr1e	94	45.500	Pundamilia_nyererei
ENSFALG00000012950	POLR1E	99	41.730	ENSPNAG00000006987	polr1e	94	41.730	Pygocentrus_nattereri
ENSFALG00000012950	POLR1E	99	57.614	ENSRNOG00000012664	Polr1e	91	57.614	Rattus_norvegicus
ENSFALG00000012950	POLR1E	99	59.898	ENSRBIG00000034214	POLR1E	99	59.737	Rhinopithecus_bieti
ENSFALG00000012950	POLR1E	99	59.796	ENSRROG00000031986	POLR1E	92	62.366	Rhinopithecus_roxellana
ENSFALG00000012950	POLR1E	99	60.051	ENSSBOG00000021415	POLR1E	94	60.051	Saimiri_boliviensis_boliviensis
ENSFALG00000012950	POLR1E	90	62.849	ENSSHAG00000016084	POLR1E	99	62.849	Sarcophilus_harrisii
ENSFALG00000012950	POLR1E	99	45.614	ENSSFOG00015002293	polr1e	95	45.614	Scleropages_formosus
ENSFALG00000012950	POLR1E	99	45.500	ENSSMAG00000011672	polr1e	88	45.500	Scophthalmus_maximus
ENSFALG00000012950	POLR1E	99	44.888	ENSSDUG00000022279	polr1e	94	44.888	Seriola_dumerili
ENSFALG00000012950	POLR1E	99	44.279	ENSSLDG00000024918	polr1e	94	44.279	Seriola_lalandi_dorsalis
ENSFALG00000012950	POLR1E	58	57.143	ENSSARG00000009810	-	58	57.143	Sorex_araneus
ENSFALG00000012950	POLR1E	99	67.595	ENSSPUG00000009499	POLR1E	95	67.595	Sphenodon_punctatus
ENSFALG00000012950	POLR1E	99	47.000	ENSSPAG00000021240	polr1e	95	47.000	Stegastes_partitus
ENSFALG00000012950	POLR1E	99	60.152	ENSSSCG00000005347	POLR1E	94	60.152	Sus_scrofa
ENSFALG00000012950	POLR1E	99	65.611	ENSTGUG00000007169	POLR1E	99	65.611	Taeniopygia_guttata
ENSFALG00000012950	POLR1E	99	45.250	ENSTRUG00000020779	polr1e	99	44.909	Takifugu_rubripes
ENSFALG00000012950	POLR1E	99	45.113	ENSTNIG00000017812	polr1e	95	45.113	Tetraodon_nigroviridis
ENSFALG00000012950	POLR1E	99	61.929	ENSTBEG00000013786	POLR1E	84	61.929	Tupaia_belangeri
ENSFALG00000012950	POLR1E	99	61.209	ENSTTRG00000008294	POLR1E	84	61.209	Tursiops_truncatus
ENSFALG00000012950	POLR1E	99	62.341	ENSUAMG00000012474	POLR1E	93	64.620	Ursus_americanus
ENSFALG00000012950	POLR1E	99	62.341	ENSUMAG00000011496	POLR1E	94	62.341	Ursus_maritimus
ENSFALG00000012950	POLR1E	86	60.117	ENSVPAG00000009048	POLR1E	81	60.117	Vicugna_pacos
ENSFALG00000012950	POLR1E	99	62.341	ENSVVUG00000019954	POLR1E	94	62.341	Vulpes_vulpes
ENSFALG00000012950	POLR1E	99	50.378	ENSXETG00000006533	polr1e	95	50.378	Xenopus_tropicalis
ENSFALG00000012950	POLR1E	99	41.206	ENSXCOG00000013706	polr1e	95	41.206	Xiphophorus_couchianus
ENSFALG00000012950	POLR1E	99	43.392	ENSXMAG00000012484	polr1e	95	43.392	Xiphophorus_maculatus