EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000012966 (Gene tree)
Gene ID: -
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 119497 bases
Position: chrJH603183.1:14077562-14197058
Accession: 101816171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000013534	S1	PF00575.23	1.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000013590	SRBD1-201	3737	XM_005043168	ENSFALP00000013534	969 (aa)	XP_005043225	U3KET0

Gene Model

Click here to download ENSFALG00000012966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000012966's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000012966	SRBD1	100	68.000	ENSG00000068784	SRBD1	100	67.659	Homo_sapiens
ENSFALG00000012966	SRBD1	96	53.846	ENSAPOG00000005103	si:ch211-117n7.8	96	53.161	Acanthochromis_polyacanthus
ENSFALG00000012966	SRBD1	100	68.976	ENSAMEG00000005993	SRBD1	100	69.277	Ailuropoda_melanoleuca
ENSFALG00000012966	SRBD1	84	57.401	ENSACIG00000009875	si:ch211-117n7.8	85	57.533	Amphilophus_citrinellus
ENSFALG00000012966	SRBD1	98	53.313	ENSAOCG00000024718	si:ch211-117n7.8	84	57.976	Amphiprion_ocellaris
ENSFALG00000012966	SRBD1	98	54.115	ENSAPEG00000002645	si:ch211-117n7.8	98	54.219	Amphiprion_percula
ENSFALG00000012966	SRBD1	99	51.683	ENSATEG00000010844	si:ch211-117n7.8	85	57.394	Anabas_testudineus
ENSFALG00000012966	SRBD1	100	86.391	ENSAPLG00000006313	SRBD1	100	86.290	Anas_platyrhynchos
ENSFALG00000012966	SRBD1	100	67.463	ENSANAG00000025573	SRBD1	100	68.410	Aotus_nancymaae
ENSFALG00000012966	SRBD1	96	53.774	ENSACLG00000024219	si:ch211-117n7.8	84	57.907	Astatotilapia_calliptera
ENSFALG00000012966	SRBD1	99	56.956	ENSAMXG00000004294	SRBD1	99	57.057	Astyanax_mexicanus
ENSFALG00000012966	SRBD1	100	68.569	ENSBTAG00000007508	SRBD1	97	68.945	Bos_taurus
ENSFALG00000012966	SRBD1	100	68.109	ENSCJAG00000000727	SRBD1	100	68.209	Callithrix_jacchus
ENSFALG00000012966	SRBD1	100	69.456	ENSCAFG00000002554	SRBD1	100	69.758	Canis_familiaris
ENSFALG00000012966	SRBD1	100	66.599	ENSCAFG00020026284	SRBD1	99	76.071	Canis_lupus_dingo
ENSFALG00000012966	SRBD1	100	68.442	ENSCHIG00000016535	SRBD1	100	67.002	Capra_hircus
ENSFALG00000012966	SRBD1	100	69.970	ENSTSYG00000012797	SRBD1	100	69.770	Carlito_syrichta
ENSFALG00000012966	SRBD1	100	69.184	ENSCPOG00000004773	SRBD1	100	69.184	Cavia_porcellus
ENSFALG00000012966	SRBD1	100	67.761	ENSCCAG00000025589	SRBD1	100	68.712	Cebus_capucinus
ENSFALG00000012966	SRBD1	100	68.762	ENSCATG00000039530	SRBD1	100	68.938	Cercocebus_atys
ENSFALG00000012966	SRBD1	100	69.694	ENSCLAG00000008623	SRBD1	100	69.654	Chinchilla_lanigera
ENSFALG00000012966	SRBD1	100	68.563	ENSCSAG00000013350	SRBD1	100	68.737	Chlorocebus_sabaeus
ENSFALG00000012966	SRBD1	87	82.353	ENSCHOG00000003805	SRBD1	87	82.353	Choloepus_hoffmanni
ENSFALG00000012966	SRBD1	100	79.594	ENSCPBG00000005677	SRBD1	100	79.391	Chrysemys_picta_bellii
ENSFALG00000012966	SRBD1	80	43.980	ENSCING00000005950	-	99	43.980	Ciona_intestinalis
ENSFALG00000012966	SRBD1	80	43.822	ENSCSAVG00000000861	-	99	43.822	Ciona_savignyi
ENSFALG00000012966	SRBD1	97	69.493	ENSCANG00000016307	SRBD1	92	71.739	Colobus_angolensis_palliatus
ENSFALG00000012966	SRBD1	100	69.675	ENSCGRG00001000513	Srbd1	100	69.574	Cricetulus_griseus_chok1gshd
ENSFALG00000012966	SRBD1	100	69.675	ENSCGRG00000002283	Srbd1	100	69.574	Cricetulus_griseus_crigri
ENSFALG00000012966	SRBD1	97	51.777	ENSCSEG00000000856	si:ch211-117n7.8	85	56.643	Cynoglossus_semilaevis
ENSFALG00000012966	SRBD1	88	56.236	ENSCVAG00000020212	si:ch211-117n7.8	94	55.964	Cyprinodon_variegatus
ENSFALG00000012966	SRBD1	100	68.769	ENSDNOG00000018686	SRBD1	100	68.725	Dasypus_novemcinctus
ENSFALG00000012966	SRBD1	100	68.432	ENSDORG00000010468	Srbd1	100	68.502	Dipodomys_ordii
ENSFALG00000012966	SRBD1	80	36.090	FBgn0051156	CG31156	79	36.341	Drosophila_melanogaster
ENSFALG00000012966	SRBD1	89	72.414	ENSETEG00000000739	SRBD1	86	72.777	Echinops_telfairi
ENSFALG00000012966	SRBD1	74	48.697	ENSEBUG00000008902	si:ch211-117n7.8	96	48.697	Eptatretus_burgeri
ENSFALG00000012966	SRBD1	100	66.201	ENSEASG00005003132	SRBD1	97	77.070	Equus_asinus_asinus
ENSFALG00000012966	SRBD1	100	68.395	ENSECAG00000013865	SRBD1	98	68.969	Equus_caballus
ENSFALG00000012966	SRBD1	96	56.211	ENSELUG00000012592	si:ch211-117n7.8	93	54.694	Esox_lucius
ENSFALG00000012966	SRBD1	100	68.263	ENSFCAG00000005101	SRBD1	100	68.762	Felis_catus
ENSFALG00000012966	SRBD1	98	70.124	ENSFDAG00000016670	SRBD1	99	70.124	Fukomys_damarensis
ENSFALG00000012966	SRBD1	97	52.626	ENSFHEG00000019480	si:ch211-117n7.8	82	58.118	Fundulus_heteroclitus
ENSFALG00000012966	SRBD1	51	53.333	ENSGMOG00000018010	-	100	53.333	Gadus_morhua
ENSFALG00000012966	SRBD1	100	85.525	ENSGALG00000009990	SRBD1	100	85.525	Gallus_gallus
ENSFALG00000012966	SRBD1	97	53.546	ENSGAFG00000019664	si:ch211-117n7.8	84	58.107	Gambusia_affinis
ENSFALG00000012966	SRBD1	63	60.320	ENSGACG00000010794	si:ch211-117n7.8	100	60.320	Gasterosteus_aculeatus
ENSFALG00000012966	SRBD1	96	76.657	ENSGAGG00000006166	SRBD1	99	83.715	Gopherus_agassizii
ENSFALG00000012966	SRBD1	98	69.373	ENSGGOG00000005910	SRBD1	95	71.834	Gorilla_gorilla
ENSFALG00000012966	SRBD1	97	46.708	ENSHBUG00000013207	si:ch211-117n7.8	87	50.766	Haplochromis_burtoni
ENSFALG00000012966	SRBD1	99	69.074	ENSHGLG00000018153	-	99	69.074	Heterocephalus_glaber_female
ENSFALG00000012966	SRBD1	99	68.941	ENSHGLG00100015183	-	99	68.941	Heterocephalus_glaber_male
ENSFALG00000012966	SRBD1	88	61.387	ENSIPUG00000009661	srbd1	87	61.387	Ictalurus_punctatus
ENSFALG00000012966	SRBD1	100	70.040	ENSSTOG00000005898	SRBD1	100	69.369	Ictidomys_tridecemlineatus
ENSFALG00000012966	SRBD1	100	65.729	ENSJJAG00000022244	Srbd1	100	65.729	Jaculus_jaculus
ENSFALG00000012966	SRBD1	97	53.259	ENSKMAG00000003473	si:ch211-117n7.8	87	56.229	Kryptolebias_marmoratus
ENSFALG00000012966	SRBD1	97	52.563	ENSLBEG00000027518	si:ch211-117n7.8	82	58.134	Labrus_bergylta
ENSFALG00000012966	SRBD1	86	71.682	ENSLACG00000009790	SRBD1	99	71.682	Latimeria_chalumnae
ENSFALG00000012966	SRBD1	96	60.375	ENSLOCG00000016360	si:ch211-117n7.8	85	65.955	Lepisosteus_oculatus
ENSFALG00000012966	SRBD1	100	68.563	ENSMFAG00000042026	SRBD1	100	68.737	Macaca_fascicularis
ENSFALG00000012966	SRBD1	100	68.563	ENSMMUG00000003490	SRBD1	100	68.737	Macaca_mulatta
ENSFALG00000012966	SRBD1	100	66.168	ENSMNEG00000034701	SRBD1	100	66.333	Macaca_nemestrina
ENSFALG00000012966	SRBD1	100	68.563	ENSMLEG00000000745	SRBD1	100	68.737	Mandrillus_leucophaeus
ENSFALG00000012966	SRBD1	81	58.427	ENSMAMG00000021921	si:ch211-117n7.8	85	56.808	Mastacembelus_armatus
ENSFALG00000012966	SRBD1	96	53.774	ENSMZEG00005027369	si:ch211-117n7.8	84	57.907	Maylandia_zebra
ENSFALG00000012966	SRBD1	81	85.157	ENSMGAG00000010273	SRBD1	100	85.157	Meleagris_gallopavo
ENSFALG00000012966	SRBD1	79	75.377	ENSMAUG00000013916	Srbd1	99	72.879	Mesocricetus_auratus
ENSFALG00000012966	SRBD1	100	68.907	ENSMICG00000007835	SRBD1	100	69.107	Microcebus_murinus
ENSFALG00000012966	SRBD1	100	68.357	ENSMOCG00000018716	Srbd1	100	68.357	Microtus_ochrogaster
ENSFALG00000012966	SRBD1	97	53.498	ENSMMOG00000007507	si:ch211-117n7.8	91	56.606	Mola_mola
ENSFALG00000012966	SRBD1	100	50.869	ENSMALG00000001562	si:ch211-117n7.8	82	57.914	Monopterus_albus
ENSFALG00000012966	SRBD1	96	69.588	MGP_CAROLIEiJ_G0021934	Srbd1	99	76.144	Mus_caroli
ENSFALG00000012966	SRBD1	100	68.085	ENSMUSG00000024135	Srbd1	97	76.440	Mus_musculus
ENSFALG00000012966	SRBD1	100	66.667	MGP_PahariEiJ_G0020924	Srbd1	92	70.199	Mus_pahari
ENSFALG00000012966	SRBD1	100	67.984	MGP_SPRETEiJ_G0022850	Srbd1	93	70.684	Mus_spretus
ENSFALG00000012966	SRBD1	100	67.001	ENSMLUG00000007039	SRBD1	100	67.700	Myotis_lucifugus
ENSFALG00000012966	SRBD1	100	66.862	ENSNGAG00000011893	Srbd1	100	66.764	Nannospalax_galili
ENSFALG00000012966	SRBD1	97	51.626	ENSNBRG00000012873	si:ch211-117n7.8	95	53.426	Neolamprologus_brichardi
ENSFALG00000012966	SRBD1	100	68.168	ENSNLEG00000016877	SRBD1	100	68.020	Nomascus_leucogenys
ENSFALG00000012966	SRBD1	100	68.172	ENSODEG00000012095	SRBD1	93	71.969	Octodon_degus
ENSFALG00000012966	SRBD1	96	54.298	ENSONIG00000000945	si:ch211-117n7.8	99	59.184	Oreochromis_niloticus
ENSFALG00000012966	SRBD1	100	69.900	ENSOCUG00000015385	SRBD1	92	73.203	Oryctolagus_cuniculus
ENSFALG00000012966	SRBD1	97	49.749	ENSORLG00000004427	si:ch211-117n7.8	96	50.000	Oryzias_latipes
ENSFALG00000012966	SRBD1	97	51.804	ENSORLG00020012792	si:ch211-117n7.8	82	57.651	Oryzias_latipes_hni
ENSFALG00000012966	SRBD1	97	52.004	ENSORLG00015018598	si:ch211-117n7.8	82	57.770	Oryzias_latipes_hsok
ENSFALG00000012966	SRBD1	99	52.337	ENSOMEG00000012229	si:ch211-117n7.8	82	57.587	Oryzias_melastigma
ENSFALG00000012966	SRBD1	100	65.729	ENSOGAG00000001076	SRBD1	92	68.879	Otolemur_garnettii
ENSFALG00000012966	SRBD1	100	64.466	ENSOARG00000005958	SRBD1	100	64.854	Ovis_aries
ENSFALG00000012966	SRBD1	100	67.700	ENSPPAG00000038442	SRBD1	100	67.723	Pan_paniscus
ENSFALG00000012966	SRBD1	100	68.332	ENSPPRG00000003449	SRBD1	100	68.831	Panthera_pardus
ENSFALG00000012966	SRBD1	100	68.574	ENSPTIG00000012495	SRBD1	100	69.076	Panthera_tigris_altaica
ENSFALG00000012966	SRBD1	100	67.700	ENSPTRG00000011889	SRBD1	100	67.723	Pan_troglodytes
ENSFALG00000012966	SRBD1	100	68.563	ENSPANG00000008063	SRBD1	100	68.186	Papio_anubis
ENSFALG00000012966	SRBD1	85	61.772	ENSPKIG00000021973	si:ch211-117n7.8	85	61.772	Paramormyrops_kingsleyae
ENSFALG00000012966	SRBD1	100	78.680	ENSPSIG00000008992	SRBD1	100	78.680	Pelodiscus_sinensis
ENSFALG00000012966	SRBD1	98	52.277	ENSPMGG00000013348	si:ch211-117n7.8	87	56.890	Periophthalmus_magnuspinnatus
ENSFALG00000012966	SRBD1	100	67.421	ENSPEMG00000020684	Srbd1	100	67.421	Peromyscus_maniculatus_bairdii
ENSFALG00000012966	SRBD1	97	53.144	ENSPFOG00000010650	si:ch211-117n7.8	84	57.751	Poecilia_formosa
ENSFALG00000012966	SRBD1	97	52.439	ENSPLAG00000002141	si:ch211-117n7.8	83	58.026	Poecilia_latipinna
ENSFALG00000012966	SRBD1	97	52.642	ENSPMEG00000018537	si:ch211-117n7.8	84	57.870	Poecilia_mexicana
ENSFALG00000012966	SRBD1	98	52.497	ENSPREG00000003258	si:ch211-117n7.8	85	57.720	Poecilia_reticulata
ENSFALG00000012966	SRBD1	100	59.643	ENSPPYG00000012444	SRBD1	99	62.523	Pongo_abelii
ENSFALG00000012966	SRBD1	77	70.470	ENSPCAG00000005629	SRBD1	80	70.470	Procavia_capensis
ENSFALG00000012966	SRBD1	100	58.776	ENSPCOG00000017669	SRBD1	100	59.077	Propithecus_coquereli
ENSFALG00000012966	SRBD1	100	60.761	ENSPVAG00000001782	SRBD1	100	61.261	Pteropus_vampyrus
ENSFALG00000012966	SRBD1	96	51.856	ENSPNYG00000000508	si:ch211-117n7.8	88	55.257	Pundamilia_nyererei
ENSFALG00000012966	SRBD1	97	57.592	ENSPNAG00000013492	SRBD1	90	60.497	Pygocentrus_nattereri
ENSFALG00000012966	SRBD1	97	67.887	ENSRNOG00000014720	Srbd1	92	70.395	Rattus_norvegicus
ENSFALG00000012966	SRBD1	97	69.326	ENSRBIG00000033486	SRBD1	92	71.522	Rhinopithecus_bieti
ENSFALG00000012966	SRBD1	97	69.326	ENSRROG00000041599	SRBD1	92	71.522	Rhinopithecus_roxellana
ENSFALG00000012966	SRBD1	100	67.668	ENSSBOG00000024982	SRBD1	100	68.168	Saimiri_boliviensis_boliviensis
ENSFALG00000012966	SRBD1	96	56.381	ENSSFOG00015001128	si:ch211-117n7.8	90	61.437	Scleropages_formosus
ENSFALG00000012966	SRBD1	99	51.220	ENSSMAG00000018256	si:ch211-117n7.8	82	57.432	Scophthalmus_maximus
ENSFALG00000012966	SRBD1	86	57.026	ENSSLDG00000023189	si:ch211-117n7.8	84	57.026	Seriola_lalandi_dorsalis
ENSFALG00000012966	SRBD1	100	64.293	ENSSARG00000009740	SRBD1	100	64.395	Sorex_araneus
ENSFALG00000012966	SRBD1	96	73.992	ENSSPUG00000010475	SRBD1	98	77.268	Sphenodon_punctatus
ENSFALG00000012966	SRBD1	95	51.911	ENSSPAG00000008092	-	84	55.819	Stegastes_partitus
ENSFALG00000012966	SRBD1	100	69.509	ENSSSCG00000008445	SRBD1	98	69.408	Sus_scrofa
ENSFALG00000012966	SRBD1	85	93.301	ENSTGUG00000003878	SRBD1	100	93.301	Taeniopygia_guttata
ENSFALG00000012966	SRBD1	99	50.193	ENSTRUG00000007080	si:ch211-117n7.8	94	56.741	Takifugu_rubripes
ENSFALG00000012966	SRBD1	98	50.245	ENSTNIG00000007464	si:ch211-117n7.8	84	55.336	Tetraodon_nigroviridis
ENSFALG00000012966	SRBD1	76	92.553	ENSTBEG00000004556	SRBD1	82	92.553	Tupaia_belangeri
ENSFALG00000012966	SRBD1	92	76.720	ENSTTRG00000011871	SRBD1	91	76.316	Tursiops_truncatus
ENSFALG00000012966	SRBD1	100	69.021	ENSUAMG00000008126	SRBD1	97	71.739	Ursus_americanus
ENSFALG00000012966	SRBD1	100	68.819	ENSUMAG00000012902	SRBD1	98	69.122	Ursus_maritimus
ENSFALG00000012966	SRBD1	86	76.686	ENSVPAG00000006825	SRBD1	93	76.686	Vicugna_pacos
ENSFALG00000012966	SRBD1	100	69.394	ENSVVUG00000005389	SRBD1	100	69.596	Vulpes_vulpes
ENSFALG00000012966	SRBD1	100	52.606	ENSXETG00000002760	srbd1	88	56.022	Xenopus_tropicalis
ENSFALG00000012966	SRBD1	97	53.673	ENSXMAG00000016861	si:ch211-117n7.8	84	57.870	Xiphophorus_maculatus