EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000012968 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 2148 bases
Position: chrJH603195.1:1128967-1131114
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000013536	PseudoU_synth_2	PF00849.22	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000013592	RPUSD3-201	1260	-	ENSFALP00000013536	267 (aa)	-	U3KET2

Gene Model

Click here to download ENSFALG00000012968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000012968's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000012968	RPUSD3	99	30.496	ENSFALG00000005171	RPUSD4	78	30.496

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000012968	RPUSD3	99	48.352	ENSG00000156990	RPUSD3	77	50.916	Homo_sapiens
ENSFALG00000012968	RPUSD3	99	48.718	ENSAMEG00000016227	RPUSD3	77	48.718	Ailuropoda_melanoleuca
ENSFALG00000012968	RPUSD3	99	51.661	ENSACAG00000009836	RPUSD3	77	51.292	Anolis_carolinensis
ENSFALG00000012968	RPUSD3	67	38.743	ENSANAG00000007127	-	71	36.486	Aotus_nancymaae
ENSFALG00000012968	RPUSD3	62	47.619	ENSANAG00000038118	-	80	47.619	Aotus_nancymaae
ENSFALG00000012968	RPUSD3	68	44.974	ENSANAG00000019945	-	75	44.974	Aotus_nancymaae
ENSFALG00000012968	RPUSD3	99	48.529	ENSBTAG00000007968	RPUSD3	79	48.529	Bos_taurus
ENSFALG00000012968	RPUSD3	99	48.708	ENSCAFG00000029733	RPUSD3	77	49.077	Canis_familiaris
ENSFALG00000012968	RPUSD3	99	48.708	ENSCAFG00020008582	RPUSD3	82	49.077	Canis_lupus_dingo
ENSFALG00000012968	RPUSD3	99	48.162	ENSCHIG00000026027	RPUSD3	81	48.718	Capra_hircus
ENSFALG00000012968	RPUSD3	99	46.570	ENSTSYG00000009994	RPUSD3	78	49.097	Carlito_syrichta
ENSFALG00000012968	RPUSD3	94	48.846	ENSCAPG00000017559	RPUSD3	98	48.846	Cavia_aperea
ENSFALG00000012968	RPUSD3	95	48.473	ENSCPOG00000037956	RPUSD3	76	47.601	Cavia_porcellus
ENSFALG00000012968	RPUSD3	99	49.451	ENSCCAG00000029530	RPUSD3	78	52.015	Cebus_capucinus
ENSFALG00000012968	RPUSD3	99	47.619	ENSCATG00000036939	RPUSD3	77	50.183	Cercocebus_atys
ENSFALG00000012968	RPUSD3	99	46.886	ENSCSAG00000010506	RPUSD3	77	49.451	Chlorocebus_sabaeus
ENSFALG00000012968	RPUSD3	90	62.083	ENSCPBG00000008825	RPUSD3	92	62.083	Chrysemys_picta_bellii
ENSFALG00000012968	RPUSD3	99	46.886	ENSCANG00000040711	RPUSD3	77	49.451	Colobus_angolensis_palliatus
ENSFALG00000012968	RPUSD3	99	47.985	ENSCGRG00001004923	Rpusd3	75	47.985	Cricetulus_griseus_chok1gshd
ENSFALG00000012968	RPUSD3	99	47.985	ENSCGRG00000018315	Rpusd3	79	47.985	Cricetulus_griseus_crigri
ENSFALG00000012968	RPUSD3	99	48.352	ENSDNOG00000039160	RPUSD3	72	48.352	Dasypus_novemcinctus
ENSFALG00000012968	RPUSD3	95	50.741	ENSDORG00000026827	Rpusd3	92	50.370	Dipodomys_ordii
ENSFALG00000012968	RPUSD3	99	47.059	ENSETEG00000006538	RPUSD3	77	47.059	Echinops_telfairi
ENSFALG00000012968	RPUSD3	75	41.584	ENSEBUG00000015605	RPUSD3	66	41.584	Eptatretus_burgeri
ENSFALG00000012968	RPUSD3	85	48.908	ENSEASG00005014160	RPUSD3	75	48.162	Equus_asinus_asinus
ENSFALG00000012968	RPUSD3	85	49.345	ENSECAG00000019988	RPUSD3	75	48.529	Equus_caballus
ENSFALG00000012968	RPUSD3	77	47.664	ENSEEUG00000007353	RPUSD3	60	47.664	Erinaceus_europaeus
ENSFALG00000012968	RPUSD3	99	48.718	ENSFCAG00000014199	RPUSD3	77	49.084	Felis_catus
ENSFALG00000012968	RPUSD3	96	47.529	ENSFDAG00000008350	RPUSD3	81	48.289	Fukomys_damarensis
ENSFALG00000012968	RPUSD3	96	58.594	ENSGAGG00000007493	RPUSD3	83	58.594	Gopherus_agassizii
ENSFALG00000012968	RPUSD3	99	48.352	ENSGGOG00000013120	RPUSD3	77	50.916	Gorilla_gorilla
ENSFALG00000012968	RPUSD3	99	48.897	ENSHGLG00000011722	RPUSD3	70	48.897	Heterocephalus_glaber_female
ENSFALG00000012968	RPUSD3	99	48.897	ENSHGLG00100016038	RPUSD3	70	48.897	Heterocephalus_glaber_male
ENSFALG00000012968	RPUSD3	99	49.265	ENSSTOG00000002125	RPUSD3	77	48.897	Ictidomys_tridecemlineatus
ENSFALG00000012968	RPUSD3	99	49.275	ENSJJAG00000012679	Rpusd3	79	49.275	Jaculus_jaculus
ENSFALG00000012968	RPUSD3	99	48.718	ENSLAFG00000017501	RPUSD3	79	48.718	Loxodonta_africana
ENSFALG00000012968	RPUSD3	99	47.253	ENSMFAG00000032407	RPUSD3	77	49.817	Macaca_fascicularis
ENSFALG00000012968	RPUSD3	99	47.619	ENSMMUG00000010628	RPUSD3	84	50.183	Macaca_mulatta
ENSFALG00000012968	RPUSD3	99	47.253	ENSMNEG00000040308	RPUSD3	77	49.817	Macaca_nemestrina
ENSFALG00000012968	RPUSD3	99	47.619	ENSMLEG00000033940	RPUSD3	77	50.183	Mandrillus_leucophaeus
ENSFALG00000012968	RPUSD3	98	48.897	ENSMAUG00000015473	Rpusd3	78	48.897	Mesocricetus_auratus
ENSFALG00000012968	RPUSD3	99	49.084	ENSMICG00000002315	RPUSD3	79	49.270	Microcebus_murinus
ENSFALG00000012968	RPUSD3	100	49.458	ENSMOCG00000022613	Rpusd3	80	49.458	Microtus_ochrogaster
ENSFALG00000012968	RPUSD3	99	48.699	ENSMODG00000005210	RPUSD3	71	48.699	Monodelphis_domestica
ENSFALG00000012968	RPUSD3	100	49.097	MGP_CAROLIEiJ_G0028725	Rpusd3	80	49.097	Mus_caroli
ENSFALG00000012968	RPUSD3	100	50.542	ENSMUSG00000051169	Rpusd3	80	50.542	Mus_musculus
ENSFALG00000012968	RPUSD3	100	49.097	MGP_PahariEiJ_G0022476	Rpusd3	80	49.097	Mus_pahari
ENSFALG00000012968	RPUSD3	100	50.542	MGP_SPRETEiJ_G0029753	Rpusd3	80	50.542	Mus_spretus
ENSFALG00000012968	RPUSD3	99	48.718	ENSMPUG00000017132	RPUSD3	77	49.084	Mustela_putorius_furo
ENSFALG00000012968	RPUSD3	99	50.365	ENSMLUG00000006135	RPUSD3	78	50.365	Myotis_lucifugus
ENSFALG00000012968	RPUSD3	99	47.426	ENSNGAG00000023704	Rpusd3	81	47.985	Nannospalax_galili
ENSFALG00000012968	RPUSD3	99	38.868	ENSNLEG00000004214	RPUSD3	77	48.795	Nomascus_leucogenys
ENSFALG00000012968	RPUSD3	94	51.938	ENSMEUG00000013098	-	99	51.938	Notamacropus_eugenii
ENSFALG00000012968	RPUSD3	99	41.392	ENSOPRG00000002300	RPUSD3	77	43.956	Ochotona_princeps
ENSFALG00000012968	RPUSD3	95	48.276	ENSODEG00000018137	RPUSD3	90	48.276	Octodon_degus
ENSFALG00000012968	RPUSD3	99	43.382	ENSOANG00000012081	-	94	43.382	Ornithorhynchus_anatinus
ENSFALG00000012968	RPUSD3	99	42.143	ENSOCUG00000027885	RPUSD3	80	44.643	Oryctolagus_cuniculus
ENSFALG00000012968	RPUSD3	99	50.916	ENSOGAG00000012592	RPUSD3	86	50.916	Otolemur_garnettii
ENSFALG00000012968	RPUSD3	99	47.794	ENSOARG00000005928	RPUSD3	77	48.352	Ovis_aries
ENSFALG00000012968	RPUSD3	99	47.253	ENSPPAG00000038083	RPUSD3	77	49.817	Pan_paniscus
ENSFALG00000012968	RPUSD3	99	48.718	ENSPPRG00000024433	RPUSD3	77	49.084	Panthera_pardus
ENSFALG00000012968	RPUSD3	99	49.084	ENSPTIG00000006828	RPUSD3	79	49.451	Panthera_tigris_altaica
ENSFALG00000012968	RPUSD3	99	47.253	ENSPTRG00000051760	RPUSD3	77	49.817	Pan_troglodytes
ENSFALG00000012968	RPUSD3	99	47.619	ENSPANG00000023885	RPUSD3	77	50.183	Papio_anubis
ENSFALG00000012968	RPUSD3	99	48.529	ENSPEMG00000017245	Rpusd3	79	48.529	Peromyscus_maniculatus_bairdii
ENSFALG00000012968	RPUSD3	99	50.000	ENSPCIG00000021901	RPUSD3	79	50.000	Phascolarctos_cinereus
ENSFALG00000012968	RPUSD3	99	49.084	ENSPPYG00000013676	RPUSD3	77	51.648	Pongo_abelii
ENSFALG00000012968	RPUSD3	57	47.059	ENSPCAG00000013731	-	53	47.059	Procavia_capensis
ENSFALG00000012968	RPUSD3	99	49.817	ENSPCOG00000018314	RPUSD3	77	50.000	Propithecus_coquereli
ENSFALG00000012968	RPUSD3	99	49.451	ENSPVAG00000011107	RPUSD3	77	49.451	Pteropus_vampyrus
ENSFALG00000012968	RPUSD3	91	51.190	ENSRNOG00000009084	Rpusd3	78	51.190	Rattus_norvegicus
ENSFALG00000012968	RPUSD3	99	46.739	ENSRBIG00000041230	RPUSD3	78	49.275	Rhinopithecus_bieti
ENSFALG00000012968	RPUSD3	99	46.739	ENSRROG00000043328	RPUSD3	78	49.275	Rhinopithecus_roxellana
ENSFALG00000012968	RPUSD3	99	49.451	ENSSBOG00000036106	RPUSD3	78	52.015	Saimiri_boliviensis_boliviensis
ENSFALG00000012968	RPUSD3	99	47.778	ENSSHAG00000015536	RPUSD3	87	47.778	Sarcophilus_harrisii
ENSFALG00000012968	RPUSD3	99	47.619	ENSSSCG00000011555	RPUSD3	77	50.916	Sus_scrofa
ENSFALG00000012968	RPUSD3	87	88.841	ENSTGUG00000008744	RPUSD3	100	88.841	Taeniopygia_guttata
ENSFALG00000012968	RPUSD3	79	49.296	ENSTBEG00000000176	RPUSD3	73	49.296	Tupaia_belangeri
ENSFALG00000012968	RPUSD3	99	47.794	ENSTTRG00000007544	RPUSD3	77	47.794	Tursiops_truncatus
ENSFALG00000012968	RPUSD3	99	48.718	ENSUAMG00000011354	RPUSD3	84	47.794	Ursus_americanus
ENSFALG00000012968	RPUSD3	99	48.718	ENSUMAG00000018830	RPUSD3	77	48.718	Ursus_maritimus
ENSFALG00000012968	RPUSD3	99	50.000	ENSVVUG00000023735	RPUSD3	78	50.368	Vulpes_vulpes
ENSFALG00000012968	RPUSD3	99	46.324	ENSXETG00000023546	rpusd3	96	46.324	Xenopus_tropicalis