EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000012974 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 2162 bases
Position: chrJH603297.1:712530-714691
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000013546	zf-C2H2	PF00096.26	4.3e-24	1	4
ENSFALP00000013546	zf-C2H2	PF00096.26	4.3e-24	2	4
ENSFALP00000013546	zf-C2H2	PF00096.26	4.3e-24	3	4
ENSFALP00000013546	zf-C2H2	PF00096.26	4.3e-24	4	4
ENSFALP00000013546	zf-met	PF12874.7	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000013602	-	687	-	ENSFALP00000013546	228 (aa)	-	U3KEU2

Gene Model

Click here to download ENSFALG00000012974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000012974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000012974	-	90	47.297	ENSFALG00000004682	ZNF236	51	47.297
ENSFALG00000012974	-	70	39.091	ENSFALG00000008017	-	96	39.091
ENSFALG00000012974	-	59	43.421	ENSFALG00000014367	-	91	43.421
ENSFALG00000012974	-	98	65.546	ENSFALG00000005762	-	89	63.025
ENSFALG00000012974	-	62	36.667	ENSFALG00000001479	GFI1B	54	37.719
ENSFALG00000012974	-	61	38.739	ENSFALG00000009044	-	100	42.857
ENSFALG00000012974	-	61	56.115	ENSFALG00000005718	SCRT2	59	56.115
ENSFALG00000012974	-	95	36.957	ENSFALG00000014292	ZNF319	79	35.821
ENSFALG00000012974	-	65	34.043	ENSFALG00000009796	ZBTB48	66	34.043

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000012974	-	98	65.126	ENSG00000019549	SNAI2	89	63.445	Homo_sapiens
ENSFALG00000012974	-	98	65.966	ENSAMEG00000009606	SNAI2	89	63.866	Ailuropoda_melanoleuca
ENSFALG00000012974	-	98	65.126	ENSANAG00000021163	SNAI2	89	63.445	Aotus_nancymaae
ENSFALG00000012974	-	98	65.966	ENSBTAG00000013227	SNAI2	89	64.286	Bos_taurus
ENSFALG00000012974	-	98	65.126	ENSCJAG00000013499	SNAI2	89	63.445	Callithrix_jacchus
ENSFALG00000012974	-	98	64.706	ENSCAFG00000006638	SNAI2	89	64.286	Canis_familiaris
ENSFALG00000012974	-	98	64.706	ENSCAFG00020015384	SNAI2	89	64.286	Canis_lupus_dingo
ENSFALG00000012974	-	98	65.546	ENSCHIG00000024410	SNAI2	89	63.866	Capra_hircus
ENSFALG00000012974	-	98	66.109	ENSTSYG00000030892	SNAI2	88	64.135	Carlito_syrichta
ENSFALG00000012974	-	90	64.840	ENSCAPG00000013078	SNAI2	62	86.331	Cavia_aperea
ENSFALG00000012974	-	98	65.126	ENSCCAG00000024100	SNAI2	89	63.445	Cebus_capucinus
ENSFALG00000012974	-	98	65.126	ENSCATG00000028656	SNAI2	89	63.445	Cercocebus_atys
ENSFALG00000012974	-	98	65.546	ENSCLAG00000011797	SNAI2	89	63.025	Chinchilla_lanigera
ENSFALG00000012974	-	98	65.126	ENSCSAG00000014787	SNAI2	89	63.445	Chlorocebus_sabaeus
ENSFALG00000012974	-	98	65.546	ENSCPBG00000020255	SNAI2	89	63.025	Chrysemys_picta_bellii
ENSFALG00000012974	-	66	58.278	ENSCSAVG00000009819	-	69	62.687	Ciona_savignyi
ENSFALG00000012974	-	98	65.126	ENSCANG00000029656	SNAI2	89	63.445	Colobus_angolensis_palliatus
ENSFALG00000012974	-	98	64.706	ENSCGRG00001013674	Snai2	89	63.866	Cricetulus_griseus_chok1gshd
ENSFALG00000012974	-	98	64.706	ENSCGRG00000012119	Snai2	89	63.866	Cricetulus_griseus_crigri
ENSFALG00000012974	-	98	66.524	ENSDORG00000029620	Snai2	89	66.234	Dipodomys_ordii
ENSFALG00000012974	-	57	79.562	ENSETEG00000016371	-	97	79.562	Echinops_telfairi
ENSFALG00000012974	-	79	67.568	ENSELUG00000018742	-	50	83.453	Esox_lucius
ENSFALG00000012974	-	98	63.362	ENSELUG00000021795	SNAI2	70	63.043	Esox_lucius
ENSFALG00000012974	-	98	65.546	ENSFDAG00000016958	SNAI2	89	63.445	Fukomys_damarensis
ENSFALG00000012974	-	98	65.546	ENSGAGG00000000426	SNAI2	89	63.025	Gopherus_agassizii
ENSFALG00000012974	-	98	65.126	ENSGGOG00000000959	SNAI2	89	63.445	Gorilla_gorilla
ENSFALG00000012974	-	98	65.778	ENSHCOG00000019435	SNAI2	88	65.778	Hippocampus_comes
ENSFALG00000012974	-	96	64.629	ENSIPUG00000000131	snai2	86	64.192	Ictalurus_punctatus
ENSFALG00000012974	-	98	65.546	ENSSTOG00000028743	SNAI2	89	63.866	Ictidomys_tridecemlineatus
ENSFALG00000012974	-	98	64.583	ENSLOCG00000005992	SNAI2	89	62.605	Lepisosteus_oculatus
ENSFALG00000012974	-	62	80.851	ENSLOCG00000004887	SNAI3	85	82.014	Lepisosteus_oculatus
ENSFALG00000012974	-	98	65.690	ENSLAFG00000009299	SNAI2	89	63.866	Loxodonta_africana
ENSFALG00000012974	-	71	68.519	ENSLAFG00000005117	SNAI3	51	75.912	Loxodonta_africana
ENSFALG00000012974	-	98	65.126	ENSMFAG00000046061	SNAI2	89	63.445	Macaca_fascicularis
ENSFALG00000012974	-	98	65.126	ENSMMUG00000016195	SNAI2	89	63.445	Macaca_mulatta
ENSFALG00000012974	-	98	65.126	ENSMNEG00000034216	SNAI2	89	63.445	Macaca_nemestrina
ENSFALG00000012974	-	98	65.126	ENSMLEG00000034407	SNAI2	89	63.445	Mandrillus_leucophaeus
ENSFALG00000012974	-	98	64.706	ENSMAUG00000008119	Snai2	89	63.866	Mesocricetus_auratus
ENSFALG00000012974	-	98	64.706	ENSMOCG00000006622	Snai2	89	63.866	Microtus_ochrogaster
ENSFALG00000012974	-	98	64.730	ENSMODG00000010173	SNAI2	89	63.866	Monodelphis_domestica
ENSFALG00000012974	-	98	64.435	MGP_CAROLIEiJ_G0020483	Snai2	89	64.017	Mus_caroli
ENSFALG00000012974	-	98	64.854	ENSMUSG00000022676	Snai2	89	64.017	Mus_musculus
ENSFALG00000012974	-	98	64.435	MGP_PahariEiJ_G0016188	Snai2	89	64.017	Mus_pahari
ENSFALG00000012974	-	98	64.854	MGP_SPRETEiJ_G0021379	Snai2	89	64.017	Mus_spretus
ENSFALG00000012974	-	98	65.966	ENSMPUG00000010793	SNAI2	89	63.866	Mustela_putorius_furo
ENSFALG00000012974	-	98	63.866	ENSMLUG00000001086	SNAI2	89	62.917	Myotis_lucifugus
ENSFALG00000012974	-	98	65.546	ENSNLEG00000013421	SNAI2	89	63.025	Nomascus_leucogenys
ENSFALG00000012974	-	97	64.979	ENSMEUG00000009510	SNAI2	90	63.830	Notamacropus_eugenii
ENSFALG00000012974	-	98	63.180	ENSOANG00000007267	SNAI2	89	63.180	Ornithorhynchus_anatinus
ENSFALG00000012974	-	98	65.546	ENSOARG00000013030	SNAI2	89	63.866	Ovis_aries
ENSFALG00000012974	-	98	65.126	ENSPPAG00000015662	SNAI2	89	63.445	Pan_paniscus
ENSFALG00000012974	-	98	65.546	ENSPPRG00000012562	-	89	63.866	Panthera_pardus
ENSFALG00000012974	-	98	65.546	ENSPTIG00000007593	SNAI2	75	63.866	Panthera_tigris_altaica
ENSFALG00000012974	-	98	65.126	ENSPTRG00000020235	SNAI2	89	63.445	Pan_troglodytes
ENSFALG00000012974	-	98	65.126	ENSPANG00000017540	SNAI2	89	63.445	Papio_anubis
ENSFALG00000012974	-	98	66.071	ENSPKIG00000002254	SNAI2	88	67.111	Paramormyrops_kingsleyae
ENSFALG00000012974	-	98	65.546	ENSPSIG00000016395	SNAI2	89	63.025	Pelodiscus_sinensis
ENSFALG00000012974	-	74	68.639	ENSPSIG00000004262	SNAI3	55	78.417	Pelodiscus_sinensis
ENSFALG00000012974	-	98	65.625	ENSPMGG00000013179	SNAI2	88	64.783	Periophthalmus_magnuspinnatus
ENSFALG00000012974	-	98	65.546	ENSPEMG00000011739	Snai2	89	63.445	Peromyscus_maniculatus_bairdii
ENSFALG00000012974	-	98	65.000	ENSPCIG00000025156	SNAI2	89	63.866	Phascolarctos_cinereus
ENSFALG00000012974	-	98	64.655	ENSPREG00000008528	SNAI2	85	64.783	Poecilia_reticulata
ENSFALG00000012974	-	98	65.126	ENSPPYG00000018578	SNAI2	89	63.445	Pongo_abelii
ENSFALG00000012974	-	98	65.966	ENSPCOG00000015656	SNAI2	89	64.286	Propithecus_coquereli
ENSFALG00000012974	-	98	63.866	ENSPVAG00000009457	SNAI2	89	63.333	Pteropus_vampyrus
ENSFALG00000012974	-	98	65.126	ENSRBIG00000041133	SNAI2	89	63.445	Rhinopithecus_bieti
ENSFALG00000012974	-	98	65.126	ENSRROG00000032273	SNAI2	89	63.445	Rhinopithecus_roxellana
ENSFALG00000012974	-	98	65.126	ENSSBOG00000035774	SNAI2	89	63.445	Saimiri_boliviensis_boliviensis
ENSFALG00000012974	-	98	65.000	ENSSHAG00000004205	SNAI2	89	63.866	Sarcophilus_harrisii
ENSFALG00000012974	-	98	62.917	ENSSFOG00015018025	SNAI2	89	62.500	Scleropages_formosus
ENSFALG00000012974	-	98	65.126	ENSSPUG00000005427	-	89	62.605	Sphenodon_punctatus
ENSFALG00000012974	-	98	64.167	ENSSSCG00000039568	SNAI2	89	63.445	Sus_scrofa
ENSFALG00000012974	-	93	66.814	ENSUAMG00000014942	SNAI2	98	64.602	Ursus_americanus
ENSFALG00000012974	-	98	65.966	ENSUMAG00000006525	SNAI2	90	63.866	Ursus_maritimus
ENSFALG00000012974	-	98	64.706	ENSVVUG00000017625	SNAI2	89	64.286	Vulpes_vulpes
ENSFALG00000012974	-	98	65.145	ENSXETG00000024006	snai2	89	63.713	Xenopus_tropicalis