EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000013183 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 31425 bases
Position: chrJH603243.1:1193526-1224950
Accession: 101816651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000013758	DND1_DSRM	PF14709.7	1e-24	1	1
ENSFALP00000013758	RRM_1	PF00076.22	1.6e-39	1	3
ENSFALP00000013758	RRM_1	PF00076.22	1.6e-39	2	3
ENSFALP00000013758	RRM_1	PF00076.22	1.6e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000013815	A1CF-201	2191	XM_005048039	ENSFALP00000013758	581 (aa)	XP_005048096	U3KFF4

Gene Model

Click here to download ENSFALG00000013183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000013183's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000013183	A1CF	51	54.027	ENSFALG00000002895	SYNCRIP	72	43.990
ENSFALG00000013183	A1CF	75	60.626	ENSFALG00000002861	RBM47	72	60.626
ENSFALG00000013183	A1CF	50	55.631	ENSFALG00000001096	HNRNPR	51	52.215
ENSFALG00000013183	A1CF	88	51.158	ENSFALG00000013157	RBM46	92	51.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000013183	A1CF	100	86.882	ENSG00000148584	A1CF	100	95.025	Homo_sapiens
ENSFALG00000013183	A1CF	100	75.548	ENSAPOG00000008259	a1cf	100	75.717	Acanthochromis_polyacanthus
ENSFALG00000013183	A1CF	100	85.497	ENSAMEG00000000523	A1CF	100	86.172	Ailuropoda_melanoleuca
ENSFALG00000013183	A1CF	100	77.025	ENSACIG00000008632	a1cf	100	78.347	Amphilophus_citrinellus
ENSFALG00000013183	A1CF	100	76.206	ENSAOCG00000023744	a1cf	91	87.538	Amphiprion_ocellaris
ENSFALG00000013183	A1CF	100	75.041	ENSAPEG00000009537	a1cf	100	75.862	Amphiprion_percula
ENSFALG00000013183	A1CF	100	77.393	ENSATEG00000013720	a1cf	100	78.713	Anabas_testudineus
ENSFALG00000013183	A1CF	100	93.548	ENSAPLG00000002964	A1CF	100	93.548	Anas_platyrhynchos
ENSFALG00000013183	A1CF	100	87.973	ENSACAG00000015269	A1CF	100	87.973	Anolis_carolinensis
ENSFALG00000013183	A1CF	100	87.053	ENSANAG00000019974	A1CF	100	87.053	Aotus_nancymaae
ENSFALG00000013183	A1CF	100	75.920	ENSACLG00000017428	a1cf	100	77.592	Astatotilapia_calliptera
ENSFALG00000013183	A1CF	100	75.041	ENSAMXG00000018180	a1cf	100	75.041	Astyanax_mexicanus
ENSFALG00000013183	A1CF	100	86.905	ENSBTAG00000021195	A1CF	100	89.054	Bos_taurus
ENSFALG00000013183	A1CF	100	86.218	ENSCJAG00000005045	A1CF	100	86.218	Callithrix_jacchus
ENSFALG00000013183	A1CF	100	86.486	ENSCAFG00000015581	A1CF	100	86.824	Canis_familiaris
ENSFALG00000013183	A1CF	100	86.486	ENSCAFG00020026421	A1CF	98	89.226	Canis_lupus_dingo
ENSFALG00000013183	A1CF	100	85.738	ENSCHIG00000020411	A1CF	100	85.738	Capra_hircus
ENSFALG00000013183	A1CF	94	88.043	ENSTSYG00000001755	A1CF	100	88.225	Carlito_syrichta
ENSFALG00000013183	A1CF	100	62.969	ENSCAPG00000017386	A1CF	100	63.481	Cavia_aperea
ENSFALG00000013183	A1CF	100	85.210	ENSCPOG00000009807	A1CF	100	85.714	Cavia_porcellus
ENSFALG00000013183	A1CF	100	86.364	ENSCCAG00000018168	A1CF	100	86.364	Cebus_capucinus
ENSFALG00000013183	A1CF	100	87.350	ENSCATG00000043715	A1CF	100	87.350	Cercocebus_atys
ENSFALG00000013183	A1CF	100	85.595	ENSCLAG00000010424	A1CF	100	85.595	Chinchilla_lanigera
ENSFALG00000013183	A1CF	100	86.509	ENSCSAG00000007032	A1CF	100	86.509	Chlorocebus_sabaeus
ENSFALG00000013183	A1CF	98	83.788	ENSCHOG00000009089	A1CF	99	84.300	Choloepus_hoffmanni
ENSFALG00000013183	A1CF	100	90.000	ENSCPBG00000026464	A1CF	100	90.000	Chrysemys_picta_bellii
ENSFALG00000013183	A1CF	100	86.341	ENSCANG00000038032	A1CF	100	86.341	Colobus_angolensis_palliatus
ENSFALG00000013183	A1CF	100	84.899	ENSCGRG00001017413	A1cf	100	84.899	Cricetulus_griseus_chok1gshd
ENSFALG00000013183	A1CF	100	84.228	ENSCGRG00000017332	A1cf	100	84.564	Cricetulus_griseus_crigri
ENSFALG00000013183	A1CF	100	73.806	ENSCSEG00000002361	a1cf	100	75.622	Cynoglossus_semilaevis
ENSFALG00000013183	A1CF	100	75.908	ENSCVAG00000010520	a1cf	100	77.558	Cyprinodon_variegatus
ENSFALG00000013183	A1CF	100	80.169	ENSDARG00000002968	a1cf	100	81.864	Danio_rerio
ENSFALG00000013183	A1CF	100	85.067	ENSDNOG00000002829	A1CF	100	85.570	Dasypus_novemcinctus
ENSFALG00000013183	A1CF	82	90.580	ENSETEG00000012527	A1CF	81	90.580	Echinops_telfairi
ENSFALG00000013183	A1CF	100	86.120	ENSEASG00005012924	A1CF	100	86.288	Equus_asinus_asinus
ENSFALG00000013183	A1CF	100	85.786	ENSECAG00000010424	A1CF	100	85.953	Equus_caballus
ENSFALG00000013183	A1CF	78	76.906	ENSEEUG00000000013	A1CF	100	76.906	Erinaceus_europaeus
ENSFALG00000013183	A1CF	100	79.496	ENSELUG00000003159	a1cf	100	79.496	Esox_lucius
ENSFALG00000013183	A1CF	100	87.009	ENSFCAG00000011179	A1CF	100	87.350	Felis_catus
ENSFALG00000013183	A1CF	100	86.735	ENSFDAG00000019371	A1CF	100	86.905	Fukomys_damarensis
ENSFALG00000013183	A1CF	100	70.000	ENSFHEG00000019652	a1cf	96	83.594	Fundulus_heteroclitus
ENSFALG00000013183	A1CF	100	70.744	ENSGMOG00000018943	a1cf	100	70.413	Gadus_morhua
ENSFALG00000013183	A1CF	95	93.369	ENSGALG00000003765	A1CF	97	93.369	Gallus_gallus
ENSFALG00000013183	A1CF	100	71.167	ENSGAFG00000014868	a1cf	100	72.333	Gambusia_affinis
ENSFALG00000013183	A1CF	100	73.399	ENSGACG00000010241	a1cf	100	74.056	Gasterosteus_aculeatus
ENSFALG00000013183	A1CF	94	90.305	ENSGAGG00000016508	A1CF	97	90.305	Gopherus_agassizii
ENSFALG00000013183	A1CF	100	85.882	ENSGGOG00000009670	A1CF	100	86.050	Gorilla_gorilla
ENSFALG00000013183	A1CF	100	76.860	ENSHBUG00000021959	a1cf	100	78.678	Haplochromis_burtoni
ENSFALG00000013183	A1CF	100	85.906	ENSHGLG00000008955	A1CF	100	85.906	Heterocephalus_glaber_female
ENSFALG00000013183	A1CF	100	85.235	ENSHGLG00100000518	A1CF	100	85.235	Heterocephalus_glaber_male
ENSFALG00000013183	A1CF	94	71.379	ENSHCOG00000017669	a1cf	100	72.104	Hippocampus_comes
ENSFALG00000013183	A1CF	90	82.682	ENSIPUG00000010367	a1cf	97	82.320	Ictalurus_punctatus
ENSFALG00000013183	A1CF	100	76.911	ENSKMAG00000006568	a1cf	100	77.561	Kryptolebias_marmoratus
ENSFALG00000013183	A1CF	99	74.632	ENSLBEG00000020994	a1cf	99	76.268	Labrus_bergylta
ENSFALG00000013183	A1CF	100	84.786	ENSLACG00000008061	A1CF	100	84.786	Latimeria_chalumnae
ENSFALG00000013183	A1CF	100	82.828	ENSLOCG00000006302	a1cf	100	82.828	Lepisosteus_oculatus
ENSFALG00000013183	A1CF	100	85.738	ENSLAFG00000015462	A1CF	100	86.074	Loxodonta_africana
ENSFALG00000013183	A1CF	100	87.692	ENSMFAG00000035948	A1CF	100	87.692	Macaca_fascicularis
ENSFALG00000013183	A1CF	100	87.692	ENSMMUG00000007077	A1CF	100	87.692	Macaca_mulatta
ENSFALG00000013183	A1CF	100	87.350	ENSMNEG00000031454	A1CF	100	87.350	Macaca_nemestrina
ENSFALG00000013183	A1CF	100	86.172	ENSMLEG00000037223	A1CF	100	86.172	Mandrillus_leucophaeus
ENSFALG00000013183	A1CF	100	75.622	ENSMAMG00000010402	a1cf	100	77.280	Mastacembelus_armatus
ENSFALG00000013183	A1CF	100	77.349	ENSMZEG00005013245	a1cf	100	78.356	Maylandia_zebra
ENSFALG00000013183	A1CF	100	93.390	ENSMGAG00000001507	A1CF	100	93.390	Meleagris_gallopavo
ENSFALG00000013183	A1CF	100	84.228	ENSMAUG00000007422	A1cf	100	84.564	Mesocricetus_auratus
ENSFALG00000013183	A1CF	100	86.294	ENSMICG00000003377	A1CF	100	86.464	Microcebus_murinus
ENSFALG00000013183	A1CF	100	85.235	ENSMOCG00000021536	A1cf	100	85.403	Microtus_ochrogaster
ENSFALG00000013183	A1CF	100	68.456	ENSMMOG00000009422	a1cf	100	70.302	Mola_mola
ENSFALG00000013183	A1CF	92	89.013	ENSMODG00000016478	A1CF	99	89.199	Monodelphis_domestica
ENSFALG00000013183	A1CF	100	74.617	ENSMALG00000012992	a1cf	100	74.617	Monopterus_albus
ENSFALG00000013183	A1CF	100	85.374	MGP_CAROLIEiJ_G0022873	A1cf	100	85.544	Mus_caroli
ENSFALG00000013183	A1CF	100	85.374	ENSMUSG00000052595	A1cf	99	90.026	Mus_musculus
ENSFALG00000013183	A1CF	100	84.864	MGP_PahariEiJ_G0014366	A1cf	100	84.864	Mus_pahari
ENSFALG00000013183	A1CF	100	85.204	MGP_SPRETEiJ_G0023792	A1cf	100	85.544	Mus_spretus
ENSFALG00000013183	A1CF	100	79.933	ENSMPUG00000016971	A1CF	100	80.438	Mustela_putorius_furo
ENSFALG00000013183	A1CF	100	85.403	ENSMLUG00000016071	A1CF	100	85.738	Myotis_lucifugus
ENSFALG00000013183	A1CF	100	85.067	ENSNGAG00000015136	A1cf	100	85.738	Nannospalax_galili
ENSFALG00000013183	A1CF	100	76.860	ENSNBRG00000001712	a1cf	100	78.678	Neolamprologus_brichardi
ENSFALG00000013183	A1CF	100	86.242	ENSNLEG00000012028	A1CF	100	86.409	Nomascus_leucogenys
ENSFALG00000013183	A1CF	94	89.273	ENSMEUG00000015909	A1CF	100	89.273	Notamacropus_eugenii
ENSFALG00000013183	A1CF	89	77.567	ENSOPRG00000010667	A1CF	97	76.880	Ochotona_princeps
ENSFALG00000013183	A1CF	100	77.851	ENSONIG00000019105	a1cf	100	79.008	Oreochromis_niloticus
ENSFALG00000013183	A1CF	78	86.710	ENSOANG00000007360	A1CF	99	86.710	Ornithorhynchus_anatinus
ENSFALG00000013183	A1CF	100	86.418	ENSOCUG00000011587	A1CF	100	86.757	Oryctolagus_cuniculus
ENSFALG00000013183	A1CF	100	75.743	ENSORLG00000013342	a1cf	100	75.413	Oryzias_latipes
ENSFALG00000013183	A1CF	100	75.777	ENSORLG00020000586	a1cf	100	76.268	Oryzias_latipes_hni
ENSFALG00000013183	A1CF	100	75.777	ENSORLG00015018569	a1cf	100	76.268	Oryzias_latipes_hsok
ENSFALG00000013183	A1CF	100	77.114	ENSOMEG00000013531	a1cf	100	77.114	Oryzias_melastigma
ENSFALG00000013183	A1CF	100	84.992	ENSOGAG00000012884	A1CF	100	85.160	Otolemur_garnettii
ENSFALG00000013183	A1CF	100	85.906	ENSOARG00000013695	A1CF	100	85.906	Ovis_aries
ENSFALG00000013183	A1CF	97	84.402	ENSPPAG00000028115	A1CF	99	89.069	Pan_paniscus
ENSFALG00000013183	A1CF	100	86.172	ENSPPRG00000012180	A1CF	100	86.509	Panthera_pardus
ENSFALG00000013183	A1CF	100	86.172	ENSPTIG00000021223	A1CF	100	86.509	Panthera_tigris_altaica
ENSFALG00000013183	A1CF	100	87.223	ENSPTRG00000002508	A1CF	100	87.394	Pan_troglodytes
ENSFALG00000013183	A1CF	100	87.692	ENSPANG00000021988	A1CF	100	87.692	Papio_anubis
ENSFALG00000013183	A1CF	100	80.905	ENSPKIG00000025176	a1cf	100	81.072	Paramormyrops_kingsleyae
ENSFALG00000013183	A1CF	100	91.065	ENSPSIG00000010318	A1CF	100	91.065	Pelodiscus_sinensis
ENSFALG00000013183	A1CF	98	67.188	ENSPMGG00000013359	a1cf	99	68.924	Periophthalmus_magnuspinnatus
ENSFALG00000013183	A1CF	100	85.570	ENSPEMG00000015021	A1cf	100	85.570	Peromyscus_maniculatus_bairdii
ENSFALG00000013183	A1CF	100	88.508	ENSPCIG00000002175	A1CF	100	88.508	Phascolarctos_cinereus
ENSFALG00000013183	A1CF	100	75.244	ENSPFOG00000007437	-	100	76.873	Poecilia_formosa
ENSFALG00000013183	A1CF	100	75.407	ENSPFOG00000006683	a1cf	100	77.036	Poecilia_formosa
ENSFALG00000013183	A1CF	100	76.238	ENSPLAG00000001210	-	100	77.888	Poecilia_latipinna
ENSFALG00000013183	A1CF	100	76.238	ENSPLAG00000000026	a1cf	100	77.888	Poecilia_latipinna
ENSFALG00000013183	A1CF	100	68.301	ENSPMEG00000015529	-	100	69.935	Poecilia_mexicana
ENSFALG00000013183	A1CF	100	69.205	ENSPMEG00000000921	a1cf	100	70.861	Poecilia_mexicana
ENSFALG00000013183	A1CF	100	75.407	ENSPREG00000016298	a1cf	100	76.873	Poecilia_reticulata
ENSFALG00000013183	A1CF	100	87.585	ENSPPYG00000002819	A1CF	100	87.755	Pongo_abelii
ENSFALG00000013183	A1CF	71	77.198	ENSPCAG00000006463	A1CF	68	83.333	Procavia_capensis
ENSFALG00000013183	A1CF	100	84.925	ENSPCOG00000024172	A1CF	100	85.260	Propithecus_coquereli
ENSFALG00000013183	A1CF	100	76.020	ENSPNYG00000017944	a1cf	100	77.814	Pundamilia_nyererei
ENSFALG00000013183	A1CF	100	81.376	ENSPNAG00000007704	a1cf	100	81.544	Pygocentrus_nattereri
ENSFALG00000013183	A1CF	100	85.374	ENSRNOG00000033195	A1cf	100	85.544	Rattus_norvegicus
ENSFALG00000013183	A1CF	100	80.000	ENSRBIG00000042892	A1CF	100	85.629	Rhinopithecus_bieti
ENSFALG00000013183	A1CF	100	86.509	ENSRROG00000041398	A1CF	99	87.681	Rhinopithecus_roxellana
ENSFALG00000013183	A1CF	100	86.242	ENSSBOG00000021930	A1CF	100	86.706	Saimiri_boliviensis_boliviensis
ENSFALG00000013183	A1CF	100	88.718	ENSSHAG00000005096	A1CF	100	88.718	Sarcophilus_harrisii
ENSFALG00000013183	A1CF	100	81.681	ENSSFOG00015011774	a1cf	100	82.017	Scleropages_formosus
ENSFALG00000013183	A1CF	100	74.919	ENSSMAG00000013271	a1cf	100	75.407	Scophthalmus_maximus
ENSFALG00000013183	A1CF	100	74.834	ENSSDUG00000013930	a1cf	100	75.828	Seriola_dumerili
ENSFALG00000013183	A1CF	100	71.119	ENSSLDG00000004290	a1cf	100	71.285	Seriola_lalandi_dorsalis
ENSFALG00000013183	A1CF	95	77.281	ENSSARG00000005940	A1CF	96	77.460	Sorex_araneus
ENSFALG00000013183	A1CF	95	87.189	ENSSPUG00000006797	A1CF	95	86.833	Sphenodon_punctatus
ENSFALG00000013183	A1CF	100	86.242	ENSSSCG00000010431	A1CF	100	86.409	Sus_scrofa
ENSFALG00000013183	A1CF	100	96.482	ENSTGUG00000005090	A1CF	100	96.482	Taeniopygia_guttata
ENSFALG00000013183	A1CF	100	74.062	ENSTRUG00000001982	a1cf	100	74.062	Takifugu_rubripes
ENSFALG00000013183	A1CF	100	74.959	ENSTNIG00000003580	a1cf	100	75.285	Tetraodon_nigroviridis
ENSFALG00000013183	A1CF	97	81.404	ENSTTRG00000013190	A1CF	95	81.579	Tursiops_truncatus
ENSFALG00000013183	A1CF	100	86.838	ENSUAMG00000020065	A1CF	100	87.179	Ursus_americanus
ENSFALG00000013183	A1CF	100	85.787	ENSUMAG00000011162	A1CF	100	86.125	Ursus_maritimus
ENSFALG00000013183	A1CF	87	84.241	ENSVPAG00000006130	A1CF	86	84.241	Vicugna_pacos
ENSFALG00000013183	A1CF	100	88.014	ENSVVUG00000002504	A1CF	99	89.700	Vulpes_vulpes
ENSFALG00000013183	A1CF	100	78.788	ENSXETG00000006611	a1cf	100	78.788	Xenopus_tropicalis
ENSFALG00000013183	A1CF	100	77.409	ENSXCOG00000003302	a1cf	100	78.571	Xiphophorus_couchianus
ENSFALG00000013183	A1CF	100	76.393	ENSXMAG00000016703	a1cf	100	77.541	Xiphophorus_maculatus