EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000013276 (Gene tree)
Gene ID: -
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 58388 bases
Position: chrJH603461.1:80439-138826
Accession: 101806592
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000013856	ResIII	PF04851.15	2e-06	1	1
ENSFALP00000013856	BRK	PF07533.16	3.7e-32	1	2
ENSFALP00000013856	BRK	PF07533.16	3.7e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000013913	CHD9-201	11480	XM_016305332	ENSFALP00000013856	2420 (aa)	XP_016160818	U3KFQ2

Gene Model

Click here to download ENSFALG00000013276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000013276's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000013276	CHD9	88	69.507	ENSFALG00000005570	CHD7	77	66.708
ENSFALG00000013276	CHD9	85	66.186	ENSFALG00000012563	CHD6	80	62.406

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000013276	CHD9	99	88.164	ENSG00000177200	CHD9	98	91.575	Homo_sapiens
ENSFALG00000013276	CHD9	98	69.686	ENSAPOG00000023034	chd9	98	69.903	Acanthochromis_polyacanthus
ENSFALG00000013276	CHD9	99	87.880	ENSAMEG00000016232	CHD9	83	87.672	Ailuropoda_melanoleuca
ENSFALG00000013276	CHD9	67	75.107	ENSACIG00000004097	chd9	56	73.807	Amphilophus_citrinellus
ENSFALG00000013276	CHD9	97	71.021	ENSAOCG00000005487	chd9	98	70.081	Amphiprion_ocellaris
ENSFALG00000013276	CHD9	97	71.038	ENSAPEG00000009859	chd9	98	69.764	Amphiprion_percula
ENSFALG00000013276	CHD9	67	78.453	ENSATEG00000002748	chd9	84	70.474	Anabas_testudineus
ENSFALG00000013276	CHD9	68	97.209	ENSAPLG00000002826	CHD9	57	97.209	Anas_platyrhynchos
ENSFALG00000013276	CHD9	68	91.930	ENSACAG00000016150	CHD9	82	87.448	Anolis_carolinensis
ENSFALG00000013276	CHD9	99	87.214	ENSANAG00000015630	CHD9	98	90.842	Aotus_nancymaae
ENSFALG00000013276	CHD9	95	71.302	ENSACLG00000016899	chd9	84	69.030	Astatotilapia_calliptera
ENSFALG00000013276	CHD9	99	68.167	ENSAMXG00000005652	chd9	99	69.309	Astyanax_mexicanus
ENSFALG00000013276	CHD9	99	88.287	ENSBTAG00000002287	CHD9	83	87.620	Bos_taurus
ENSFALG00000013276	CHD9	99	87.052	ENSCJAG00000001573	CHD9	98	91.209	Callithrix_jacchus
ENSFALG00000013276	CHD9	99	88.255	ENSCAFG00000009699	CHD9	83	88.130	Canis_familiaris
ENSFALG00000013276	CHD9	99	88.255	ENSCAFG00020002879	CHD9	98	91.575	Canis_lupus_dingo
ENSFALG00000013276	CHD9	99	87.708	ENSTSYG00000007693	CHD9	98	90.842	Carlito_syrichta
ENSFALG00000013276	CHD9	78	69.314	ENSCAPG00000011604	CHD9	62	71.107	Cavia_aperea
ENSFALG00000013276	CHD9	99	82.958	ENSCPOG00000036544	CHD9	82	82.958	Cavia_porcellus
ENSFALG00000013276	CHD9	99	86.756	ENSCCAG00000036178	CHD9	98	91.575	Cebus_capucinus
ENSFALG00000013276	CHD9	99	87.469	ENSCATG00000036753	CHD9	98	91.575	Cercocebus_atys
ENSFALG00000013276	CHD9	99	86.969	ENSCLAG00000007137	CHD9	100	91.790	Chinchilla_lanigera
ENSFALG00000013276	CHD9	99	87.677	ENSCSAG00000005311	CHD9	83	87.968	Chlorocebus_sabaeus
ENSFALG00000013276	CHD9	69	94.231	ENSCHOG00000003935	CHD9	60	94.231	Choloepus_hoffmanni
ENSFALG00000013276	CHD9	99	92.860	ENSCPBG00000012459	CHD9	82	94.794	Chrysemys_picta_bellii
ENSFALG00000013276	CHD9	99	88.052	ENSCANG00000030349	CHD9	98	91.575	Colobus_angolensis_palliatus
ENSFALG00000013276	CHD9	99	85.994	ENSCGRG00001016150	Chd9	83	85.661	Cricetulus_griseus_chok1gshd
ENSFALG00000013276	CHD9	99	85.994	ENSCGRG00000012850	Chd9	100	90.650	Cricetulus_griseus_crigri
ENSFALG00000013276	CHD9	97	68.958	ENSCSEG00000009209	chd9	99	67.557	Cynoglossus_semilaevis
ENSFALG00000013276	CHD9	95	71.002	ENSCVAG00000016195	chd9	84	69.237	Cyprinodon_variegatus
ENSFALG00000013276	CHD9	68	72.823	ENSDARG00000074498	chd9	99	67.989	Danio_rerio
ENSFALG00000013276	CHD9	96	87.446	ENSDNOG00000006045	CHD9	99	86.718	Dasypus_novemcinctus
ENSFALG00000013276	CHD9	82	85.378	ENSDORG00000008523	-	99	85.679	Dipodomys_ordii
ENSFALG00000013276	CHD9	91	93.158	ENSETEG00000009565	CHD9	76	93.158	Echinops_telfairi
ENSFALG00000013276	CHD9	99	88.431	ENSEASG00005014832	CHD9	99	91.114	Equus_asinus_asinus
ENSFALG00000013276	CHD9	99	88.181	ENSECAG00000011505	CHD9	83	87.963	Equus_caballus
ENSFALG00000013276	CHD9	77	93.370	ENSEEUG00000014515	CHD9	69	93.370	Erinaceus_europaeus
ENSFALG00000013276	CHD9	83	75.000	ENSELUG00000006031	chd9	99	67.506	Esox_lucius
ENSFALG00000013276	CHD9	99	87.583	ENSFCAG00000022534	CHD9	98	91.209	Felis_catus
ENSFALG00000013276	CHD9	99	86.964	ENSFDAG00000021037	CHD9	83	86.953	Fukomys_damarensis
ENSFALG00000013276	CHD9	95	71.781	ENSFHEG00000006068	chd9	99	69.187	Fundulus_heteroclitus
ENSFALG00000013276	CHD9	81	77.559	ENSGMOG00000006040	chd9	81	77.620	Gadus_morhua
ENSFALG00000013276	CHD9	96	95.179	ENSGALG00000039178	CHD9	82	95.136	Gallus_gallus
ENSFALG00000013276	CHD9	97	69.776	ENSGAFG00000010014	chd9	99	68.448	Gambusia_affinis
ENSFALG00000013276	CHD9	97	67.570	ENSGACG00000016694	chd9	96	76.217	Gasterosteus_aculeatus
ENSFALG00000013276	CHD9	99	88.005	ENSGGOG00000014816	CHD9	98	91.209	Gorilla_gorilla
ENSFALG00000013276	CHD9	97	70.605	ENSHBUG00000023322	chd9	98	71.228	Haplochromis_burtoni
ENSFALG00000013276	CHD9	99	86.708	ENSHGLG00000014938	CHD9	100	91.790	Heterocephalus_glaber_female
ENSFALG00000013276	CHD9	97	67.470	ENSHCOG00000000937	chd9	97	68.620	Hippocampus_comes
ENSFALG00000013276	CHD9	98	70.178	ENSIPUG00000016448	chd9	97	74.638	Ictalurus_punctatus
ENSFALG00000013276	CHD9	99	86.744	ENSSTOG00000022273	CHD9	100	91.790	Ictidomys_tridecemlineatus
ENSFALG00000013276	CHD9	82	86.345	ENSJJAG00000015741	-	99	86.094	Jaculus_jaculus
ENSFALG00000013276	CHD9	97	70.501	ENSKMAG00000016784	chd9	96	70.654	Kryptolebias_marmoratus
ENSFALG00000013276	CHD9	97	69.874	ENSLBEG00000012077	chd9	99	68.706	Labrus_bergylta
ENSFALG00000013276	CHD9	99	76.803	ENSLACG00000005557	CHD9	82	76.587	Latimeria_chalumnae
ENSFALG00000013276	CHD9	99	74.148	ENSLOCG00000007225	chd9	99	74.298	Lepisosteus_oculatus
ENSFALG00000013276	CHD9	99	87.297	ENSLAFG00000015374	CHD9	83	86.964	Loxodonta_africana
ENSFALG00000013276	CHD9	99	88.093	ENSMFAG00000041354	CHD9	98	91.575	Macaca_fascicularis
ENSFALG00000013276	CHD9	99	88.093	ENSMMUG00000016310	CHD9	98	91.575	Macaca_mulatta
ENSFALG00000013276	CHD9	99	88.093	ENSMNEG00000031494	CHD9	82	89.696	Macaca_nemestrina
ENSFALG00000013276	CHD9	99	88.093	ENSMLEG00000043219	CHD9	98	91.575	Mandrillus_leucophaeus
ENSFALG00000013276	CHD9	95	71.033	ENSMAMG00000003909	chd9	84	69.027	Mastacembelus_armatus
ENSFALG00000013276	CHD9	97	70.747	ENSMZEG00005006581	chd9	99	69.234	Maylandia_zebra
ENSFALG00000013276	CHD9	99	88.861	ENSMGAG00000004642	CHD9	60	90.640	Meleagris_gallopavo
ENSFALG00000013276	CHD9	99	87.662	ENSMICG00000016679	CHD9	98	90.110	Microcebus_murinus
ENSFALG00000013276	CHD9	67	76.239	ENSMMOG00000016406	chd9	58	75.595	Mola_mola
ENSFALG00000013276	CHD9	87	80.066	ENSMODG00000013142	-	99	92.743	Monodelphis_domestica
ENSFALG00000013276	CHD9	95	71.634	ENSMALG00000013306	chd9	83	69.035	Monopterus_albus
ENSFALG00000013276	CHD9	99	85.512	MGP_CAROLIEiJ_G0031364	Chd9	83	85.012	Mus_caroli
ENSFALG00000013276	CHD9	99	85.202	ENSMUSG00000056608	Chd9	100	90.080	Mus_musculus
ENSFALG00000013276	CHD9	99	83.617	MGP_PahariEiJ_G0022964	Chd9	82	83.077	Mus_pahari
ENSFALG00000013276	CHD9	99	85.494	MGP_SPRETEiJ_G0032483	Chd9	83	84.952	Mus_spretus
ENSFALG00000013276	CHD9	99	88.476	ENSMPUG00000003285	CHD9	83	88.267	Mustela_putorius_furo
ENSFALG00000013276	CHD9	99	86.792	ENSMLUG00000004456	CHD9	83	86.583	Myotis_lucifugus
ENSFALG00000013276	CHD9	97	70.413	ENSNBRG00000009423	chd9	99	68.933	Neolamprologus_brichardi
ENSFALG00000013276	CHD9	88	90.094	ENSNLEG00000001026	CHD9	82	89.671	Nomascus_leucogenys
ENSFALG00000013276	CHD9	73	100.000	ENSMEUG00000008222	-	70	100.000	Notamacropus_eugenii
ENSFALG00000013276	CHD9	79	97.744	ENSOPRG00000011168	CHD9	68	95.714	Ochotona_princeps
ENSFALG00000013276	CHD9	99	87.011	ENSODEG00000004466	CHD9	83	86.511	Octodon_degus
ENSFALG00000013276	CHD9	96	72.262	ENSONIG00000002816	chd9	99	70.772	Oreochromis_niloticus
ENSFALG00000013276	CHD9	99	89.713	ENSOANG00000013401	CHD9	83	89.838	Ornithorhynchus_anatinus
ENSFALG00000013276	CHD9	99	87.796	ENSOCUG00000001016	CHD9	98	87.754	Oryctolagus_cuniculus
ENSFALG00000013276	CHD9	97	68.320	ENSORLG00000013810	chd9	79	70.235	Oryzias_latipes
ENSFALG00000013276	CHD9	66	75.669	ENSORLG00020020665	chd9	80	69.602	Oryzias_latipes_hni
ENSFALG00000013276	CHD9	97	69.489	ENSORLG00015019126	chd9	96	69.659	Oryzias_latipes_hsok
ENSFALG00000013276	CHD9	55	78.143	ENSOMEG00000015978	chd9	74	77.417	Oryzias_melastigma
ENSFALG00000013276	CHD9	99	87.417	ENSOGAG00000002110	CHD9	83	87.042	Otolemur_garnettii
ENSFALG00000013276	CHD9	99	88.177	ENSOARG00000017664	CHD9	83	87.386	Ovis_aries
ENSFALG00000013276	CHD9	99	87.171	ENSPPAG00000039388	-	99	86.962	Pan_paniscus
ENSFALG00000013276	CHD9	99	87.542	ENSPPRG00000004801	CHD9	98	91.209	Panthera_pardus
ENSFALG00000013276	CHD9	99	86.292	ENSPTIG00000021854	CHD9	98	81.101	Panthera_tigris_altaica
ENSFALG00000013276	CHD9	99	88.167	ENSPTRG00000008113	CHD9	98	91.209	Pan_troglodytes
ENSFALG00000013276	CHD9	99	88.174	ENSPANG00000019307	CHD9	98	91.575	Papio_anubis
ENSFALG00000013276	CHD9	68	77.685	ENSPKIG00000021876	chd9	99	70.538	Paramormyrops_kingsleyae
ENSFALG00000013276	CHD9	96	67.905	ENSPKIG00000025401	-	60	71.627	Paramormyrops_kingsleyae
ENSFALG00000013276	CHD9	56	92.831	ENSPSIG00000008099	CHD9	73	92.831	Pelodiscus_sinensis
ENSFALG00000013276	CHD9	81	89.027	ENSPCIG00000017215	CHD9	94	90.013	Phascolarctos_cinereus
ENSFALG00000013276	CHD9	95	70.581	ENSPFOG00000015839	chd9	82	68.720	Poecilia_formosa
ENSFALG00000013276	CHD9	97	70.704	ENSPLAG00000011118	chd9	99	69.264	Poecilia_latipinna
ENSFALG00000013276	CHD9	95	70.962	ENSPMEG00000015106	chd9	82	69.181	Poecilia_mexicana
ENSFALG00000013276	CHD9	97	69.666	ENSPREG00000006473	chd9	99	68.290	Poecilia_reticulata
ENSFALG00000013276	CHD9	99	87.875	ENSPPYG00000007348	CHD9	83	87.667	Pongo_abelii
ENSFALG00000013276	CHD9	75	91.927	ENSPCAG00000007564	CHD9	70	91.927	Procavia_capensis
ENSFALG00000013276	CHD9	99	86.203	ENSPCOG00000028433	CHD9	98	91.209	Propithecus_coquereli
ENSFALG00000013276	CHD9	96	85.171	ENSPVAG00000015617	CHD9	80	85.171	Pteropus_vampyrus
ENSFALG00000013276	CHD9	97	70.747	ENSPNYG00000010947	chd9	99	69.194	Pundamilia_nyererei
ENSFALG00000013276	CHD9	95	72.947	ENSPNAG00000024141	chd9	99	70.077	Pygocentrus_nattereri
ENSFALG00000013276	CHD9	88	83.888	ENSRNOG00000049302	Chd9	98	77.633	Rattus_norvegicus
ENSFALG00000013276	CHD9	99	88.037	ENSRBIG00000035553	CHD9	98	91.575	Rhinopithecus_bieti
ENSFALG00000013276	CHD9	98	88.258	ENSRROG00000033278	CHD9	98	91.575	Rhinopithecus_roxellana
ENSFALG00000013276	CHD9	99	87.713	ENSSBOG00000030240	CHD9	98	91.941	Saimiri_boliviensis_boliviensis
ENSFALG00000013276	CHD9	99	88.301	ENSSHAG00000002719	CHD9	83	88.250	Sarcophilus_harrisii
ENSFALG00000013276	CHD9	97	71.621	ENSSFOG00015020209	chd9	99	70.196	Scleropages_formosus
ENSFALG00000013276	CHD9	99	68.575	ENSSFOG00015001327	chd9	69	74.970	Scleropages_formosus
ENSFALG00000013276	CHD9	97	68.912	ENSSMAG00000008953	chd9	96	69.567	Scophthalmus_maximus
ENSFALG00000013276	CHD9	97	70.780	ENSSDUG00000006139	chd9	99	68.807	Seriola_dumerili
ENSFALG00000013276	CHD9	97	70.641	ENSSLDG00000017818	chd9	99	69.267	Seriola_lalandi_dorsalis
ENSFALG00000013276	CHD9	65	91.866	ENSSARG00000010632	CHD9	54	91.866	Sorex_araneus
ENSFALG00000013276	CHD9	97	70.778	ENSSPAG00000021649	chd9	99	69.261	Stegastes_partitus
ENSFALG00000013276	CHD9	88	98.592	ENSTGUG00000007476	CHD9	82	98.592	Taeniopygia_guttata
ENSFALG00000013276	CHD9	67	76.107	ENSTRUG00000009125	chd9	83	69.443	Takifugu_rubripes
ENSFALG00000013276	CHD9	68	83.902	ENSTNIG00000003825	chd9	85	83.902	Tetraodon_nigroviridis
ENSFALG00000013276	CHD9	68	81.532	ENSTBEG00000016052	-	69	81.532	Tupaia_belangeri
ENSFALG00000013276	CHD9	88	88.545	ENSTTRG00000012674	CHD9	73	88.075	Tursiops_truncatus
ENSFALG00000013276	CHD9	76	85.598	ENSUAMG00000022706	CHD9	98	91.575	Ursus_americanus
ENSFALG00000013276	CHD9	88	87.097	ENSUMAG00000004043	CHD9	97	95.096	Ursus_maritimus
ENSFALG00000013276	CHD9	96	86.644	ENSVPAG00000001374	CHD9	80	86.190	Vicugna_pacos
ENSFALG00000013276	CHD9	99	88.172	ENSVVUG00000019435	CHD9	83	88.047	Vulpes_vulpes
ENSFALG00000013276	CHD9	99	78.759	ENSXETG00000000349	chd9	80	85.428	Xenopus_tropicalis
ENSFALG00000013276	CHD9	95	71.682	ENSXCOG00000012997	chd9	98	69.327	Xiphophorus_couchianus
ENSFALG00000013276	CHD9	97	70.150	ENSXMAG00000016192	chd9	99	70.012	Xiphophorus_maculatus