EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000013334 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 11197 bases
Position: chrJH603173.1:21741486-21752682
Accession: 101819411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000013916	RtcB	PF01139.17	1.3e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000013973	RTCB-201	3544	-	ENSFALP00000013916	505 (aa)	XP_005039901	U3KFW2

Gene Model

Click here to download ENSFALG00000013334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000013334's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000013334	RTCB	100	97.624	ENSG00000100220	RTCB	100	97.624	Homo_sapiens
ENSFALG00000013334	RTCB	100	94.455	ENSAPOG00000006040	rtcb	100	94.455	Acanthochromis_polyacanthus
ENSFALG00000013334	RTCB	100	97.426	ENSAMEG00000016152	RTCB	100	97.426	Ailuropoda_melanoleuca
ENSFALG00000013334	RTCB	100	90.099	ENSACIG00000009083	rtcb	100	90.099	Amphilophus_citrinellus
ENSFALG00000013334	RTCB	100	94.653	ENSAOCG00000005662	rtcb	100	95.435	Amphiprion_ocellaris
ENSFALG00000013334	RTCB	100	94.653	ENSAPEG00000024701	rtcb	100	94.653	Amphiprion_percula
ENSFALG00000013334	RTCB	96	90.144	ENSAPEG00000024653	rtcb	100	90.144	Amphiprion_percula
ENSFALG00000013334	RTCB	100	94.851	ENSATEG00000000618	rtcb	100	94.851	Anabas_testudineus
ENSFALG00000013334	RTCB	100	94.605	ENSACAG00000014817	RTCB	100	94.605	Anolis_carolinensis
ENSFALG00000013334	RTCB	100	81.782	ENSANAG00000018191	-	91	81.782	Aotus_nancymaae
ENSFALG00000013334	RTCB	72	94.444	ENSANAG00000023724	-	100	61.462	Aotus_nancymaae
ENSFALG00000013334	RTCB	100	93.465	ENSACLG00000008367	rtcb	100	94.565	Astatotilapia_calliptera
ENSFALG00000013334	RTCB	100	95.248	ENSAMXG00000042320	rtcb	100	95.248	Astyanax_mexicanus
ENSFALG00000013334	RTCB	100	97.624	ENSBTAG00000011070	RTCB	100	97.624	Bos_taurus
ENSFALG00000013334	RTCB	100	73.465	WBGene00008877	rtcb-1	100	73.465	Caenorhabditis_elegans
ENSFALG00000013334	RTCB	100	97.426	ENSCJAG00000006128	RTCB	100	97.426	Callithrix_jacchus
ENSFALG00000013334	RTCB	100	97.426	ENSCAFG00000001785	RTCB	100	97.426	Canis_familiaris
ENSFALG00000013334	RTCB	100	93.069	ENSCAFG00000010789	-	100	93.069	Canis_familiaris
ENSFALG00000013334	RTCB	87	93.636	ENSCAFG00020018953	-	99	93.636	Canis_lupus_dingo
ENSFALG00000013334	RTCB	100	97.426	ENSCAFG00020004890	-	100	97.426	Canis_lupus_dingo
ENSFALG00000013334	RTCB	100	97.624	ENSCHIG00000027009	-	100	97.624	Capra_hircus
ENSFALG00000013334	RTCB	100	97.624	ENSTSYG00000012320	RTCB	100	97.624	Carlito_syrichta
ENSFALG00000013334	RTCB	94	97.904	ENSCAPG00000011647	RTCB	96	97.904	Cavia_aperea
ENSFALG00000013334	RTCB	100	97.426	ENSCCAG00000000618	RTCB	100	97.426	Cebus_capucinus
ENSFALG00000013334	RTCB	100	97.426	ENSCATG00000033424	RTCB	100	97.426	Cercocebus_atys
ENSFALG00000013334	RTCB	100	97.426	ENSCLAG00000007997	RTCB	100	97.426	Chinchilla_lanigera
ENSFALG00000013334	RTCB	100	97.228	ENSCSAG00000008351	RTCB	100	97.228	Chlorocebus_sabaeus
ENSFALG00000013334	RTCB	100	83.168	ENSCHOG00000009123	RTCB	100	83.168	Choloepus_hoffmanni
ENSFALG00000013334	RTCB	100	97.822	ENSCPBG00000023184	RTCB	100	97.822	Chrysemys_picta_bellii
ENSFALG00000013334	RTCB	100	81.386	ENSCING00000003830	-	100	81.386	Ciona_intestinalis
ENSFALG00000013334	RTCB	100	81.782	ENSCSAVG00000008124	-	100	80.866	Ciona_savignyi
ENSFALG00000013334	RTCB	100	93.861	ENSCANG00000001891	RTCB	100	93.861	Colobus_angolensis_palliatus
ENSFALG00000013334	RTCB	100	97.624	ENSCGRG00001011173	Rtcb	100	97.624	Cricetulus_griseus_chok1gshd
ENSFALG00000013334	RTCB	93	98.089	ENSCGRG00000009587	-	96	98.089	Cricetulus_griseus_crigri
ENSFALG00000013334	RTCB	100	93.861	ENSCSEG00000003986	rtcb	100	93.861	Cynoglossus_semilaevis
ENSFALG00000013334	RTCB	82	93.750	ENSCVAG00000000569	rtcb	95	93.750	Cyprinodon_variegatus
ENSFALG00000013334	RTCB	100	95.050	ENSDARG00000101047	rtcb	100	95.050	Danio_rerio
ENSFALG00000013334	RTCB	80	95.086	ENSDNOG00000012425	RTCB	99	95.086	Dasypus_novemcinctus
ENSFALG00000013334	RTCB	100	97.426	ENSDORG00000010855	Rtcb	100	97.426	Dipodomys_ordii
ENSFALG00000013334	RTCB	99	85.487	FBgn0032781	RtcB	99	85.487	Drosophila_melanogaster
ENSFALG00000013334	RTCB	100	90.891	ENSETEG00000001988	RTCB	100	90.891	Echinops_telfairi
ENSFALG00000013334	RTCB	100	85.743	ENSEBUG00000014235	rtcb	100	85.743	Eptatretus_burgeri
ENSFALG00000013334	RTCB	100	97.822	ENSEASG00005019059	RTCB	100	97.822	Equus_asinus_asinus
ENSFALG00000013334	RTCB	100	97.822	ENSECAG00000023998	RTCB	100	97.822	Equus_caballus
ENSFALG00000013334	RTCB	88	89.462	ENSEEUG00000006251	RTCB	99	89.462	Erinaceus_europaeus
ENSFALG00000013334	RTCB	100	83.932	ENSELUG00000009275	rtcb	100	83.932	Esox_lucius
ENSFALG00000013334	RTCB	100	97.624	ENSFCAG00000026480	RTCB	100	97.624	Felis_catus
ENSFALG00000013334	RTCB	100	97.426	ENSFDAG00000018150	RTCB	100	97.426	Fukomys_damarensis
ENSFALG00000013334	RTCB	100	94.455	ENSFHEG00000009595	rtcb	100	94.455	Fundulus_heteroclitus
ENSFALG00000013334	RTCB	100	93.069	ENSGMOG00000018882	rtcb	100	93.069	Gadus_morhua
ENSFALG00000013334	RTCB	100	98.812	ENSGALG00000012611	RTCB	100	98.812	Gallus_gallus
ENSFALG00000013334	RTCB	100	94.257	ENSGAFG00000004198	rtcb	100	94.257	Gambusia_affinis
ENSFALG00000013334	RTCB	100	94.257	ENSGACG00000000586	rtcb	100	94.257	Gasterosteus_aculeatus
ENSFALG00000013334	RTCB	93	96.809	ENSGAGG00000019133	RTCB	98	96.809	Gopherus_agassizii
ENSFALG00000013334	RTCB	100	97.624	ENSGGOG00000011402	RTCB	100	97.624	Gorilla_gorilla
ENSFALG00000013334	RTCB	100	93.465	ENSHBUG00000020571	rtcb	100	93.465	Haplochromis_burtoni
ENSFALG00000013334	RTCB	100	97.426	ENSHGLG00000004492	RTCB	100	97.426	Heterocephalus_glaber_female
ENSFALG00000013334	RTCB	93	70.149	ENSHGLG00000001066	-	99	70.149	Heterocephalus_glaber_female
ENSFALG00000013334	RTCB	100	97.426	ENSHGLG00100008965	RTCB	100	97.426	Heterocephalus_glaber_male
ENSFALG00000013334	RTCB	100	92.702	ENSHCOG00000006450	rtcb	100	92.702	Hippocampus_comes
ENSFALG00000013334	RTCB	100	95.248	ENSIPUG00000015443	rtcb	100	95.248	Ictalurus_punctatus
ENSFALG00000013334	RTCB	100	97.624	ENSSTOG00000003878	RTCB	100	97.624	Ictidomys_tridecemlineatus
ENSFALG00000013334	RTCB	100	97.426	ENSJJAG00000010667	Rtcb	100	97.426	Jaculus_jaculus
ENSFALG00000013334	RTCB	100	94.257	ENSKMAG00000013178	rtcb	100	94.257	Kryptolebias_marmoratus
ENSFALG00000013334	RTCB	100	94.653	ENSLBEG00000010566	RTCB	100	94.653	Labrus_bergylta
ENSFALG00000013334	RTCB	100	93.663	ENSLBEG00000000214	rtcb	100	93.663	Labrus_bergylta
ENSFALG00000013334	RTCB	100	95.842	ENSLACG00000013033	RTCB	100	95.842	Latimeria_chalumnae
ENSFALG00000013334	RTCB	100	95.644	ENSLOCG00000016515	rtcb	99	95.644	Lepisosteus_oculatus
ENSFALG00000013334	RTCB	100	97.030	ENSLAFG00000002082	RTCB	100	97.030	Loxodonta_africana
ENSFALG00000013334	RTCB	100	97.228	ENSMFAG00000034419	RTCB	100	97.228	Macaca_fascicularis
ENSFALG00000013334	RTCB	100	97.228	ENSMMUG00000006720	RTCB	100	97.228	Macaca_mulatta
ENSFALG00000013334	RTCB	100	97.228	ENSMNEG00000040669	RTCB	100	97.228	Macaca_nemestrina
ENSFALG00000013334	RTCB	100	97.426	ENSMLEG00000040505	RTCB	100	97.426	Mandrillus_leucophaeus
ENSFALG00000013334	RTCB	100	95.248	ENSMAMG00000020676	rtcb	100	95.248	Mastacembelus_armatus
ENSFALG00000013334	RTCB	100	93.465	ENSMZEG00005018942	rtcb	100	93.465	Maylandia_zebra
ENSFALG00000013334	RTCB	100	98.422	ENSMGAG00000012805	RTCB	100	98.422	Meleagris_gallopavo
ENSFALG00000013334	RTCB	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSFALG00000013334	RTCB	100	97.426	ENSMICG00000013303	-	100	97.426	Microcebus_murinus
ENSFALG00000013334	RTCB	100	78.218	ENSMICG00000036677	-	100	78.218	Microcebus_murinus
ENSFALG00000013334	RTCB	100	97.624	ENSMOCG00000002440	Rtcb	100	97.624	Microtus_ochrogaster
ENSFALG00000013334	RTCB	100	94.653	ENSMMOG00000005987	rtcb	100	94.653	Mola_mola
ENSFALG00000013334	RTCB	100	98.218	ENSMODG00000001414	RTCB	100	98.218	Monodelphis_domestica
ENSFALG00000013334	RTCB	100	94.455	ENSMALG00000007603	rtcb	100	94.455	Monopterus_albus
ENSFALG00000013334	RTCB	100	97.624	MGP_CAROLIEiJ_G0015689	Rtcb	100	97.624	Mus_caroli
ENSFALG00000013334	RTCB	100	97.624	ENSMUSG00000001783	Rtcb	100	97.624	Mus_musculus
ENSFALG00000013334	RTCB	100	97.624	MGP_PahariEiJ_G0031396	Rtcb	100	97.624	Mus_pahari
ENSFALG00000013334	RTCB	100	97.624	MGP_SPRETEiJ_G0016507	Rtcb	100	97.624	Mus_spretus
ENSFALG00000013334	RTCB	100	97.426	ENSMPUG00000012285	RTCB	100	97.426	Mustela_putorius_furo
ENSFALG00000013334	RTCB	100	94.675	ENSMLUG00000007803	RTCB	100	94.675	Myotis_lucifugus
ENSFALG00000013334	RTCB	72	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSFALG00000013334	RTCB	100	93.663	ENSNBRG00000017202	rtcb	100	93.663	Neolamprologus_brichardi
ENSFALG00000013334	RTCB	100	97.624	ENSNLEG00000004960	RTCB	100	97.624	Nomascus_leucogenys
ENSFALG00000013334	RTCB	100	72.673	ENSMEUG00000007809	-	100	72.673	Notamacropus_eugenii
ENSFALG00000013334	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSFALG00000013334	RTCB	100	64.356	ENSODEG00000005042	-	100	64.356	Octodon_degus
ENSFALG00000013334	RTCB	82	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSFALG00000013334	RTCB	100	94.653	ENSONIG00000007474	rtcb	100	94.653	Oreochromis_niloticus
ENSFALG00000013334	RTCB	100	98.218	ENSOANG00000005524	RTCB	100	98.218	Ornithorhynchus_anatinus
ENSFALG00000013334	RTCB	93	97.660	ENSOCUG00000008270	RTCB	96	97.660	Oryctolagus_cuniculus
ENSFALG00000013334	RTCB	100	94.257	ENSORLG00000020093	rtcb	100	94.257	Oryzias_latipes
ENSFALG00000013334	RTCB	100	94.257	ENSORLG00020003706	rtcb	100	94.257	Oryzias_latipes_hni
ENSFALG00000013334	RTCB	100	94.455	ENSORLG00015002968	rtcb	100	94.455	Oryzias_latipes_hsok
ENSFALG00000013334	RTCB	100	93.861	ENSOMEG00000021278	rtcb	100	93.861	Oryzias_melastigma
ENSFALG00000013334	RTCB	100	96.832	ENSOGAG00000001425	RTCB	100	96.832	Otolemur_garnettii
ENSFALG00000013334	RTCB	100	97.624	ENSOARG00000018008	RTCB	100	97.624	Ovis_aries
ENSFALG00000013334	RTCB	100	97.624	ENSPPAG00000028667	RTCB	100	97.624	Pan_paniscus
ENSFALG00000013334	RTCB	100	97.624	ENSPPRG00000004038	RTCB	100	97.624	Panthera_pardus
ENSFALG00000013334	RTCB	94	94.526	ENSPTIG00000020499	RTCB	97	94.526	Panthera_tigris_altaica
ENSFALG00000013334	RTCB	100	97.624	ENSPTRG00000014287	RTCB	100	97.624	Pan_troglodytes
ENSFALG00000013334	RTCB	100	97.228	ENSPANG00000016035	RTCB	100	97.228	Papio_anubis
ENSFALG00000013334	RTCB	100	94.059	ENSPKIG00000001881	rtcb	100	94.059	Paramormyrops_kingsleyae
ENSFALG00000013334	RTCB	91	98.478	ENSPSIG00000011690	RTCB	100	98.478	Pelodiscus_sinensis
ENSFALG00000013334	RTCB	100	94.851	ENSPMGG00000016672	rtcb	100	94.851	Periophthalmus_magnuspinnatus
ENSFALG00000013334	RTCB	100	97.624	ENSPEMG00000019548	Rtcb	100	97.624	Peromyscus_maniculatus_bairdii
ENSFALG00000013334	RTCB	100	91.485	ENSPMAG00000005657	rtcb	100	91.485	Petromyzon_marinus
ENSFALG00000013334	RTCB	100	98.218	ENSPCIG00000009467	RTCB	100	98.218	Phascolarctos_cinereus
ENSFALG00000013334	RTCB	100	94.653	ENSPFOG00000003058	rtcb	100	94.653	Poecilia_formosa
ENSFALG00000013334	RTCB	100	94.653	ENSPLAG00000017663	rtcb	100	94.653	Poecilia_latipinna
ENSFALG00000013334	RTCB	100	94.653	ENSPMEG00000006227	rtcb	100	94.653	Poecilia_mexicana
ENSFALG00000013334	RTCB	100	94.455	ENSPREG00000018467	rtcb	100	94.455	Poecilia_reticulata
ENSFALG00000013334	RTCB	100	97.624	ENSPPYG00000011752	RTCB	100	97.624	Pongo_abelii
ENSFALG00000013334	RTCB	93	80.297	ENSPCAG00000013641	RTCB	100	80.297	Procavia_capensis
ENSFALG00000013334	RTCB	100	97.426	ENSPCOG00000017243	RTCB	100	97.426	Propithecus_coquereli
ENSFALG00000013334	RTCB	93	96.596	ENSPVAG00000002380	RTCB	100	96.596	Pteropus_vampyrus
ENSFALG00000013334	RTCB	100	93.465	ENSPNYG00000022760	rtcb	100	93.465	Pundamilia_nyererei
ENSFALG00000013334	RTCB	100	95.248	ENSPNAG00000009209	rtcb	100	95.248	Pygocentrus_nattereri
ENSFALG00000013334	RTCB	100	97.624	ENSRNOG00000004813	Rtcb	100	97.624	Rattus_norvegicus
ENSFALG00000013334	RTCB	100	88.538	ENSRBIG00000042090	RTCB	100	88.538	Rhinopithecus_bieti
ENSFALG00000013334	RTCB	100	92.673	ENSSBOG00000020085	-	100	92.673	Saimiri_boliviensis_boliviensis
ENSFALG00000013334	RTCB	94	98.312	ENSSHAG00000016277	RTCB	100	98.312	Sarcophilus_harrisii
ENSFALG00000013334	RTCB	100	94.257	ENSSFOG00015011572	RTCB	100	94.257	Scleropages_formosus
ENSFALG00000013334	RTCB	100	92.871	ENSSFOG00015000763	rtcb	100	92.871	Scleropages_formosus
ENSFALG00000013334	RTCB	100	91.287	ENSSMAG00000005096	rtcb	100	91.287	Scophthalmus_maximus
ENSFALG00000013334	RTCB	100	94.455	ENSSDUG00000012605	rtcb	100	94.455	Seriola_dumerili
ENSFALG00000013334	RTCB	100	94.455	ENSSLDG00000019458	rtcb	100	94.455	Seriola_lalandi_dorsalis
ENSFALG00000013334	RTCB	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSFALG00000013334	RTCB	100	97.030	ENSSPUG00000012814	RTCB	100	97.030	Sphenodon_punctatus
ENSFALG00000013334	RTCB	100	94.653	ENSSPAG00000004623	rtcb	100	94.653	Stegastes_partitus
ENSFALG00000013334	RTCB	100	97.624	ENSSSCG00000000158	RTCB	100	97.624	Sus_scrofa
ENSFALG00000013334	RTCB	100	100.000	ENSTGUG00000010947	RTCB	99	100.000	Taeniopygia_guttata
ENSFALG00000013334	RTCB	91	95.217	ENSTRUG00000009880	rtcb	100	95.217	Takifugu_rubripes
ENSFALG00000013334	RTCB	100	93.465	ENSTNIG00000002484	rtcb	100	93.465	Tetraodon_nigroviridis
ENSFALG00000013334	RTCB	100	84.554	ENSTBEG00000004418	RTCB	100	84.554	Tupaia_belangeri
ENSFALG00000013334	RTCB	93	97.021	ENSTTRG00000006417	RTCB	100	97.021	Tursiops_truncatus
ENSFALG00000013334	RTCB	100	97.426	ENSUAMG00000022792	RTCB	100	97.426	Ursus_americanus
ENSFALG00000013334	RTCB	100	97.426	ENSUMAG00000017225	RTCB	100	97.426	Ursus_maritimus
ENSFALG00000013334	RTCB	100	97.426	ENSVPAG00000005375	RTCB	100	97.426	Vicugna_pacos
ENSFALG00000013334	RTCB	100	97.426	ENSVVUG00000023408	RTCB	100	98.280	Vulpes_vulpes
ENSFALG00000013334	RTCB	100	95.446	ENSXETG00000011523	rtcb	100	95.446	Xenopus_tropicalis
ENSFALG00000013334	RTCB	100	94.257	ENSXMAG00000002855	rtcb	100	94.257	Xiphophorus_maculatus