EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000013342 (Gene tree)
Gene ID: -
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 14067 bases
Position: chrJH603173.1:21776030-21790096
Accession: 101819611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000013921	zf-C2H2	PF00096.26	7.1e-20	1	2
ENSFALP00000013921	zf-C2H2	PF00096.26	7.1e-20	2	2
ENSFALP00000013921	zf-met	PF12874.7	9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000013978	PRDM4-201	2557	-	ENSFALP00000013921	796 (aa)	XP_005039903	U3KFW7

Gene Model

Click here to download ENSFALG00000013342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000013342's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000013342	PRDM4	100	87.077	ENSG00000110851	PRDM4	95	97.183	Homo_sapiens
ENSFALG00000013342	PRDM4	100	87.469	ENSAMEG00000016174	PRDM4	99	87.594	Ailuropoda_melanoleuca
ENSFALG00000013342	PRDM4	100	94.472	ENSAPLG00000009846	PRDM4	99	94.598	Anas_platyrhynchos
ENSFALG00000013342	PRDM4	100	86.951	ENSANAG00000024800	PRDM4	99	87.453	Aotus_nancymaae
ENSFALG00000013342	PRDM4	100	87.829	ENSBTAG00000012999	PRDM4	99	88.206	Bos_taurus
ENSFALG00000013342	PRDM4	100	86.826	ENSCJAG00000015261	PRDM4	99	87.327	Callithrix_jacchus
ENSFALG00000013342	PRDM4	100	87.829	ENSCAFG00000001788	PRDM4	99	88.206	Canis_familiaris
ENSFALG00000013342	PRDM4	100	87.829	ENSCAFG00020004916	PRDM4	99	88.206	Canis_lupus_dingo
ENSFALG00000013342	PRDM4	100	87.578	ENSCHIG00000019409	PRDM4	99	87.955	Capra_hircus
ENSFALG00000013342	PRDM4	100	87.077	ENSTSYG00000009248	PRDM4	99	87.453	Carlito_syrichta
ENSFALG00000013342	PRDM4	100	82.979	ENSCAPG00000013937	PRDM4	99	82.979	Cavia_aperea
ENSFALG00000013342	PRDM4	100	82.484	ENSCPOG00000022385	PRDM4	100	82.484	Cavia_porcellus
ENSFALG00000013342	PRDM4	100	87.077	ENSCCAG00000036033	PRDM4	99	87.578	Cebus_capucinus
ENSFALG00000013342	PRDM4	100	86.951	ENSCATG00000044797	PRDM4	99	87.453	Cercocebus_atys
ENSFALG00000013342	PRDM4	100	84.204	ENSCLAG00000007545	PRDM4	100	84.701	Chinchilla_lanigera
ENSFALG00000013342	PRDM4	100	87.202	ENSCSAG00000002896	PRDM4	99	87.704	Chlorocebus_sabaeus
ENSFALG00000013342	PRDM4	71	94.340	ENSCHOG00000001744	PRDM4	85	94.340	Choloepus_hoffmanni
ENSFALG00000013342	PRDM4	100	92.337	ENSCPBG00000023187	PRDM4	100	92.337	Chrysemys_picta_bellii
ENSFALG00000013342	PRDM4	100	87.202	ENSCANG00000021804	PRDM4	99	87.704	Colobus_angolensis_palliatus
ENSFALG00000013342	PRDM4	100	85.056	ENSCGRG00001015102	-	100	85.056	Cricetulus_griseus_chok1gshd
ENSFALG00000013342	PRDM4	96	84.884	ENSCGRG00000004044	-	100	84.884	Cricetulus_griseus_crigri
ENSFALG00000013342	PRDM4	100	86.700	ENSDNOG00000032478	PRDM4	99	87.752	Dasypus_novemcinctus
ENSFALG00000013342	PRDM4	100	73.618	ENSDORG00000015081	-	100	73.618	Dipodomys_ordii
ENSFALG00000013342	PRDM4	94	45.810	ENSEBUG00000003775	prdm4	99	45.972	Eptatretus_burgeri
ENSFALG00000013342	PRDM4	100	87.453	ENSECAG00000015423	PRDM4	99	87.829	Equus_caballus
ENSFALG00000013342	PRDM4	94	84.667	ENSEEUG00000006569	PRDM4	99	84.667	Erinaceus_europaeus
ENSFALG00000013342	PRDM4	99	59.562	ENSELUG00000015265	prdm4	99	60.171	Esox_lucius
ENSFALG00000013342	PRDM4	100	87.578	ENSFCAG00000022478	PRDM4	99	87.955	Felis_catus
ENSFALG00000013342	PRDM4	100	94.737	ENSGALG00000012619	PRDM4	99	94.862	Gallus_gallus
ENSFALG00000013342	PRDM4	100	91.834	ENSGAGG00000002763	PRDM4	95	91.834	Gopherus_agassizii
ENSFALG00000013342	PRDM4	100	87.202	ENSGGOG00000001244	PRDM4	99	87.704	Gorilla_gorilla
ENSFALG00000013342	PRDM4	100	85.553	ENSHGLG00000004590	PRDM4	98	85.553	Heterocephalus_glaber_female
ENSFALG00000013342	PRDM4	100	84.577	ENSHGLG00100007464	PRDM4	100	84.577	Heterocephalus_glaber_male
ENSFALG00000013342	PRDM4	95	62.387	ENSIPUG00000024162	prdm4	100	58.216	Ictalurus_punctatus
ENSFALG00000013342	PRDM4	100	87.578	ENSSTOG00000016168	PRDM4	99	87.955	Ictidomys_tridecemlineatus
ENSFALG00000013342	PRDM4	80	87.547	ENSJJAG00000022448	-	94	85.145	Jaculus_jaculus
ENSFALG00000013342	PRDM4	100	74.381	ENSLACG00000007452	PRDM4	99	74.629	Latimeria_chalumnae
ENSFALG00000013342	PRDM4	78	42.520	ENSLOCG00000017092	prdm4	100	54.113	Lepisosteus_oculatus
ENSFALG00000013342	PRDM4	98	87.437	ENSLAFG00000001483	PRDM4	100	87.817	Loxodonta_africana
ENSFALG00000013342	PRDM4	100	87.327	ENSMFAG00000041862	PRDM4	99	87.829	Macaca_fascicularis
ENSFALG00000013342	PRDM4	100	87.327	ENSMMUG00000015550	PRDM4	99	87.829	Macaca_mulatta
ENSFALG00000013342	PRDM4	100	87.327	ENSMNEG00000032319	PRDM4	99	87.829	Macaca_nemestrina
ENSFALG00000013342	PRDM4	100	87.453	ENSMLEG00000039607	PRDM4	99	87.955	Mandrillus_leucophaeus
ENSFALG00000013342	PRDM4	100	86.483	ENSMGAG00000012815	PRDM4	100	86.608	Meleagris_gallopavo
ENSFALG00000013342	PRDM4	100	86.449	ENSMICG00000007807	PRDM4	99	86.826	Microcebus_murinus
ENSFALG00000013342	PRDM4	100	85.678	ENSMOCG00000000753	Prdm4	99	85.678	Microtus_ochrogaster
ENSFALG00000013342	PRDM4	100	86.809	ENSMUSG00000035529	Prdm4	100	86.809	Mus_musculus
ENSFALG00000013342	PRDM4	100	85.822	MGP_PahariEiJ_G0031398	Prdm4	100	86.198	Mus_pahari
ENSFALG00000013342	PRDM4	100	86.826	MGP_SPRETEiJ_G0016505	Prdm4	100	87.202	Mus_spretus
ENSFALG00000013342	PRDM4	100	81.773	ENSMPUG00000012238	PRDM4	99	81.704	Mustela_putorius_furo
ENSFALG00000013342	PRDM4	100	86.826	ENSMLUG00000000767	PRDM4	99	87.202	Myotis_lucifugus
ENSFALG00000013342	PRDM4	100	86.324	ENSNGAG00000018627	Prdm4	100	86.700	Nannospalax_galili
ENSFALG00000013342	PRDM4	100	86.951	ENSNLEG00000006748	PRDM4	99	87.453	Nomascus_leucogenys
ENSFALG00000013342	PRDM4	89	85.681	ENSMEUG00000004495	PRDM4	89	85.915	Notamacropus_eugenii
ENSFALG00000013342	PRDM4	89	87.202	ENSOPRG00000010192	PRDM4	89	88.095	Ochotona_princeps
ENSFALG00000013342	PRDM4	100	84.548	ENSODEG00000014750	PRDM4	99	84.925	Octodon_degus
ENSFALG00000013342	PRDM4	100	88.206	ENSOANG00000005526	PRDM4	99	88.206	Ornithorhynchus_anatinus
ENSFALG00000013342	PRDM4	94	88.698	ENSOCUG00000012859	PRDM4	96	88.698	Oryctolagus_cuniculus
ENSFALG00000013342	PRDM4	100	86.951	ENSOGAG00000011945	PRDM4	100	87.327	Otolemur_garnettii
ENSFALG00000013342	PRDM4	100	87.202	ENSOARG00000017955	PRDM4	99	87.578	Ovis_aries
ENSFALG00000013342	PRDM4	100	87.202	ENSPPAG00000038438	PRDM4	99	87.704	Pan_paniscus
ENSFALG00000013342	PRDM4	100	87.578	ENSPPRG00000004144	PRDM4	99	87.955	Panthera_pardus
ENSFALG00000013342	PRDM4	100	87.578	ENSPTIG00000005847	PRDM4	99	87.955	Panthera_tigris_altaica
ENSFALG00000013342	PRDM4	100	87.202	ENSPTRG00000005400	PRDM4	99	87.704	Pan_troglodytes
ENSFALG00000013342	PRDM4	100	87.327	ENSPANG00000022084	PRDM4	99	87.829	Papio_anubis
ENSFALG00000013342	PRDM4	99	59.620	ENSPKIG00000000875	prdm4	99	59.264	Paramormyrops_kingsleyae
ENSFALG00000013342	PRDM4	85	95.028	ENSPSIG00000012066	PRDM4	100	95.028	Pelodiscus_sinensis
ENSFALG00000013342	PRDM4	100	86.198	ENSPEMG00000014598	Prdm4	100	86.324	Peromyscus_maniculatus_bairdii
ENSFALG00000013342	PRDM4	99	85.588	ENSPCIG00000009471	PRDM4	98	85.714	Phascolarctos_cinereus
ENSFALG00000013342	PRDM4	100	86.951	ENSPPYG00000004913	PRDM4	99	87.453	Pongo_abelii
ENSFALG00000013342	PRDM4	83	95.455	ENSPCAG00000009987	PRDM4	83	95.455	Procavia_capensis
ENSFALG00000013342	PRDM4	100	86.575	ENSPCOG00000021060	PRDM4	99	86.951	Propithecus_coquereli
ENSFALG00000013342	PRDM4	100	86.842	ENSPVAG00000001596	PRDM4	99	87.343	Pteropus_vampyrus
ENSFALG00000013342	PRDM4	100	85.965	ENSRNOG00000004962	Prdm4	100	85.965	Rattus_norvegicus
ENSFALG00000013342	PRDM4	100	87.453	ENSRBIG00000035488	PRDM4	99	87.955	Rhinopithecus_bieti
ENSFALG00000013342	PRDM4	100	87.327	ENSRROG00000012779	PRDM4	99	87.829	Rhinopithecus_roxellana
ENSFALG00000013342	PRDM4	100	86.951	ENSSBOG00000000403	PRDM4	99	87.453	Saimiri_boliviensis_boliviensis
ENSFALG00000013342	PRDM4	99	63.793	ENSSFOG00015023358	prdm4	98	63.793	Scleropages_formosus
ENSFALG00000013342	PRDM4	100	87.704	ENSSSCG00000000160	PRDM4	99	88.080	Sus_scrofa
ENSFALG00000013342	PRDM4	100	98.492	ENSTGUG00000010962	-	99	98.492	Taeniopygia_guttata
ENSFALG00000013342	PRDM4	74	80.546	ENSTBEG00000001732	PRDM4	84	80.546	Tupaia_belangeri
ENSFALG00000013342	PRDM4	100	86.951	ENSTTRG00000011056	PRDM4	99	87.327	Tursiops_truncatus
ENSFALG00000013342	PRDM4	100	87.453	ENSUAMG00000022796	PRDM4	99	87.829	Ursus_americanus
ENSFALG00000013342	PRDM4	100	87.453	ENSUMAG00000017231	PRDM4	99	87.829	Ursus_maritimus
ENSFALG00000013342	PRDM4	100	87.829	ENSVPAG00000002215	PRDM4	100	88.206	Vicugna_pacos
ENSFALG00000013342	PRDM4	100	87.829	ENSVVUG00000023397	PRDM4	99	88.206	Vulpes_vulpes