EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000013428 (Gene tree)
Gene ID: -
Gene Symbol: SHQ1
Alias: FLJ10539|Shq1p
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 38487 bases
Position: chrJH603195.1:6985873-7024359
Accession: 101814754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000014011	SHQ1	PF04925.15	9.4e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000014068	SHQ1-201	2456	XM_005053294	ENSFALP00000014011	605 (aa)	XP_005053351	U3KG57

Gene Model

Click here to download ENSFALG00000013428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000013428's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000013428	SHQ1	95	62.931	ENSG00000144736	SHQ1	96	85.417	Homo_sapiens
ENSFALG00000013428	SHQ1	72	62.054	ENSAPOG00000000397	shq1	99	51.752	Acanthochromis_polyacanthus
ENSFALG00000013428	SHQ1	92	63.943	ENSAMEG00000015140	SHQ1	97	63.943	Ailuropoda_melanoleuca
ENSFALG00000013428	SHQ1	71	63.908	ENSACIG00000021249	shq1	68	64.183	Amphilophus_citrinellus
ENSFALG00000013428	SHQ1	72	63.393	ENSAOCG00000023311	shq1	98	53.165	Amphiprion_ocellaris
ENSFALG00000013428	SHQ1	72	62.723	ENSAPEG00000021686	shq1	98	53.045	Amphiprion_percula
ENSFALG00000013428	SHQ1	83	78.740	ENSAPLG00000013926	SHQ1	100	79.134	Anas_platyrhynchos
ENSFALG00000013428	SHQ1	99	67.049	ENSACAG00000014809	SHQ1	91	67.049	Anolis_carolinensis
ENSFALG00000013428	SHQ1	91	49.192	ENSANAG00000030500	-	97	48.921	Aotus_nancymaae
ENSFALG00000013428	SHQ1	94	63.021	ENSANAG00000029241	SHQ1	99	62.609	Aotus_nancymaae
ENSFALG00000013428	SHQ1	72	62.500	ENSACLG00000023077	shq1	66	62.619	Astatotilapia_calliptera
ENSFALG00000013428	SHQ1	70	57.506	ENSAMXG00000043822	shq1	71	57.279	Astyanax_mexicanus
ENSFALG00000013428	SHQ1	91	63.196	ENSBTAG00000005436	SHQ1	96	62.950	Bos_taurus
ENSFALG00000013428	SHQ1	71	34.529	WBGene00021655	Y48A5A.1	92	34.442	Caenorhabditis_elegans
ENSFALG00000013428	SHQ1	94	63.495	ENSCJAG00000015131	SHQ1	99	63.085	Callithrix_jacchus
ENSFALG00000013428	SHQ1	94	61.831	ENSCAFG00000006434	SHQ1	100	62.436	Canis_familiaris
ENSFALG00000013428	SHQ1	94	62.003	ENSCAFG00020016743	SHQ1	100	62.607	Canis_lupus_dingo
ENSFALG00000013428	SHQ1	94	61.073	ENSCHIG00000012271	SHQ1	91	61.073	Capra_hircus
ENSFALG00000013428	SHQ1	93	60.420	ENSTSYG00000014439	SHQ1	99	59.545	Carlito_syrichta
ENSFALG00000013428	SHQ1	85	51.429	ENSCAPG00000009343	SHQ1	96	69.677	Cavia_aperea
ENSFALG00000013428	SHQ1	93	59.796	ENSCPOG00000011443	SHQ1	99	59.897	Cavia_porcellus
ENSFALG00000013428	SHQ1	91	56.708	ENSCCAG00000027080	SHQ1	96	56.912	Cebus_capucinus
ENSFALG00000013428	SHQ1	93	49.913	ENSCCAG00000036087	-	99	49.913	Cebus_capucinus
ENSFALG00000013428	SHQ1	94	64.471	ENSCATG00000041238	SHQ1	99	63.951	Cercocebus_atys
ENSFALG00000013428	SHQ1	94	58.854	ENSCLAG00000004206	SHQ1	99	58.304	Chinchilla_lanigera
ENSFALG00000013428	SHQ1	80	61.507	ENSCSAG00000011514	SHQ1	99	61.020	Chlorocebus_sabaeus
ENSFALG00000013428	SHQ1	56	57.310	ENSCHOG00000003273	-	84	71.667	Choloepus_hoffmanni
ENSFALG00000013428	SHQ1	100	75.327	ENSCPBG00000006441	SHQ1	100	75.654	Chrysemys_picta_bellii
ENSFALG00000013428	SHQ1	69	41.388	ENSCING00000008013	-	89	41.289	Ciona_intestinalis
ENSFALG00000013428	SHQ1	64	40.816	ENSCSAVG00000002332	-	88	40.816	Ciona_savignyi
ENSFALG00000013428	SHQ1	93	64.448	ENSCANG00000039295	SHQ1	99	64.211	Colobus_angolensis_palliatus
ENSFALG00000013428	SHQ1	93	59.091	ENSCGRG00001012583	Shq1	98	68.443	Cricetulus_griseus_chok1gshd
ENSFALG00000013428	SHQ1	93	59.091	ENSCGRG00000009849	Shq1	98	68.443	Cricetulus_griseus_crigri
ENSFALG00000013428	SHQ1	68	63.636	ENSCSEG00000007829	shq1	99	50.311	Cynoglossus_semilaevis
ENSFALG00000013428	SHQ1	71	61.959	ENSCVAG00000020049	shq1	99	48.276	Cyprinodon_variegatus
ENSFALG00000013428	SHQ1	71	63.510	ENSDARG00000058522	shq1	69	63.855	Danio_rerio
ENSFALG00000013428	SHQ1	94	62.241	ENSDNOG00000033937	SHQ1	99	62.241	Dasypus_novemcinctus
ENSFALG00000013428	SHQ1	94	54.045	ENSETEG00000005766	SHQ1	99	54.325	Echinops_telfairi
ENSFALG00000013428	SHQ1	63	46.770	ENSEBUG00000005445	shq1	73	50.153	Eptatretus_burgeri
ENSFALG00000013428	SHQ1	94	63.542	ENSEASG00005002237	SHQ1	99	63.368	Equus_asinus_asinus
ENSFALG00000013428	SHQ1	92	65.256	ENSECAG00000015673	SHQ1	96	65.079	Equus_caballus
ENSFALG00000013428	SHQ1	90	63.964	ENSEEUG00000010568	SHQ1	96	64.144	Erinaceus_europaeus
ENSFALG00000013428	SHQ1	99	51.159	ENSELUG00000003476	shq1	98	52.512	Esox_lucius
ENSFALG00000013428	SHQ1	92	64.007	ENSFCAG00000012781	SHQ1	97	63.879	Felis_catus
ENSFALG00000013428	SHQ1	74	68.444	ENSFDAG00000005595	SHQ1	90	58.419	Fukomys_damarensis
ENSFALG00000013428	SHQ1	71	62.443	ENSFHEG00000017552	shq1	99	50.894	Fundulus_heteroclitus
ENSFALG00000013428	SHQ1	64	62.563	ENSGMOG00000007350	shq1	100	62.814	Gadus_morhua
ENSFALG00000013428	SHQ1	100	79.967	ENSGALG00000007798	SHQ1	100	79.967	Gallus_gallus
ENSFALG00000013428	SHQ1	64	61.558	ENSGACG00000011797	shq1	100	61.809	Gasterosteus_aculeatus
ENSFALG00000013428	SHQ1	95	62.950	ENSGGOG00000034818	SHQ1	99	63.058	Gorilla_gorilla
ENSFALG00000013428	SHQ1	72	62.500	ENSHBUG00000010857	shq1	99	50.874	Haplochromis_burtoni
ENSFALG00000013428	SHQ1	92	57.216	ENSHGLG00000003637	SHQ1	89	58.579	Heterocephalus_glaber_female
ENSFALG00000013428	SHQ1	92	57.411	ENSHGLG00100011957	SHQ1	89	58.752	Heterocephalus_glaber_male
ENSFALG00000013428	SHQ1	99	50.413	ENSHCOG00000010799	shq1	98	49.429	Hippocampus_comes
ENSFALG00000013428	SHQ1	73	58.940	ENSIPUG00000001247	shq1	71	60.333	Ictalurus_punctatus
ENSFALG00000013428	SHQ1	72	71.233	ENSSTOG00000010043	SHQ1	81	71.041	Ictidomys_tridecemlineatus
ENSFALG00000013428	SHQ1	90	60.721	ENSJJAG00000017611	Shq1	95	69.388	Jaculus_jaculus
ENSFALG00000013428	SHQ1	72	61.124	ENSKMAG00000004457	shq1	98	51.299	Kryptolebias_marmoratus
ENSFALG00000013428	SHQ1	97	56.465	ENSLACG00000014243	SHQ1	91	56.373	Latimeria_chalumnae
ENSFALG00000013428	SHQ1	99	54.200	ENSLOCG00000009970	shq1	99	55.938	Lepisosteus_oculatus
ENSFALG00000013428	SHQ1	94	64.533	ENSMFAG00000039148	SHQ1	99	64.125	Macaca_fascicularis
ENSFALG00000013428	SHQ1	91	49.283	ENSMFAG00000037396	-	96	48.741	Macaca_fascicularis
ENSFALG00000013428	SHQ1	86	62.571	ENSMMUG00000009571	SHQ1	96	62.004	Macaca_mulatta
ENSFALG00000013428	SHQ1	91	49.283	ENSMMUG00000021761	-	96	48.741	Macaca_mulatta
ENSFALG00000013428	SHQ1	94	64.533	ENSMNEG00000032667	SHQ1	99	64.125	Macaca_nemestrina
ENSFALG00000013428	SHQ1	95	64.655	ENSMLEG00000038493	SHQ1	99	64.249	Mandrillus_leucophaeus
ENSFALG00000013428	SHQ1	100	50.000	ENSMAMG00000023432	shq1	95	52.057	Mastacembelus_armatus
ENSFALG00000013428	SHQ1	72	62.500	ENSMZEG00005008649	shq1	68	62.619	Maylandia_zebra
ENSFALG00000013428	SHQ1	100	79.639	ENSMGAG00000009640	SHQ1	100	79.639	Meleagris_gallopavo
ENSFALG00000013428	SHQ1	93	60.070	ENSMAUG00000022030	Shq1	98	69.672	Mesocricetus_auratus
ENSFALG00000013428	SHQ1	94	60.034	ENSMICG00000009224	SHQ1	99	59.428	Microcebus_murinus
ENSFALG00000013428	SHQ1	72	68.707	ENSMOCG00000017836	Shq1	99	56.537	Microtus_ochrogaster
ENSFALG00000013428	SHQ1	99	51.307	ENSMMOG00000010569	shq1	99	51.550	Mola_mola
ENSFALG00000013428	SHQ1	90	59.455	ENSMODG00000003926	SHQ1	98	59.455	Monodelphis_domestica
ENSFALG00000013428	SHQ1	100	52.104	ENSMALG00000008870	shq1	99	49.922	Monopterus_albus
ENSFALG00000013428	SHQ1	94	60.312	MGP_CAROLIEiJ_G0028689	Shq1	99	70.082	Mus_caroli
ENSFALG00000013428	SHQ1	94	59.965	ENSMUSG00000035378	Shq1	99	70.082	Mus_musculus
ENSFALG00000013428	SHQ1	93	60.946	MGP_PahariEiJ_G0022440	Shq1	98	71.311	Mus_pahari
ENSFALG00000013428	SHQ1	94	60.139	MGP_SPRETEiJ_G0029717	Shq1	98	69.672	Mus_spretus
ENSFALG00000013428	SHQ1	95	63.040	ENSMPUG00000017006	SHQ1	98	63.040	Mustela_putorius_furo
ENSFALG00000013428	SHQ1	84	58.641	ENSMLUG00000013539	SHQ1	97	59.029	Myotis_lucifugus
ENSFALG00000013428	SHQ1	93	55.439	ENSNGAG00000023317	Shq1	99	53.767	Nannospalax_galili
ENSFALG00000013428	SHQ1	57	61.560	ENSNBRG00000024004	shq1	98	48.417	Neolamprologus_brichardi
ENSFALG00000013428	SHQ1	91	65.357	ENSNLEG00000002731	SHQ1	97	64.758	Nomascus_leucogenys
ENSFALG00000013428	SHQ1	74	62.037	ENSMEUG00000009350	-	73	62.037	Notamacropus_eugenii
ENSFALG00000013428	SHQ1	73	68.161	ENSODEG00000009192	SHQ1	82	68.539	Octodon_degus
ENSFALG00000013428	SHQ1	72	62.500	ENSONIG00000020264	shq1	99	49.375	Oreochromis_niloticus
ENSFALG00000013428	SHQ1	93	61.352	ENSOCUG00000016695	SHQ1	99	60.068	Oryctolagus_cuniculus
ENSFALG00000013428	SHQ1	70	61.432	ENSORLG00000023538	shq1	75	61.337	Oryzias_latipes
ENSFALG00000013428	SHQ1	70	61.432	ENSORLG00020003697	shq1	74	61.575	Oryzias_latipes_hni
ENSFALG00000013428	SHQ1	70	61.201	ENSORLG00015021040	shq1	75	61.098	Oryzias_latipes_hsok
ENSFALG00000013428	SHQ1	70	62.125	ENSOMEG00000001225	shq1	74	62.053	Oryzias_melastigma
ENSFALG00000013428	SHQ1	93	64.298	ENSOGAG00000003898	SHQ1	100	64.645	Otolemur_garnettii
ENSFALG00000013428	SHQ1	94	59.966	ENSOARG00000009547	SHQ1	99	60.034	Ovis_aries
ENSFALG00000013428	SHQ1	95	48.877	ENSPPAG00000043263	-	99	46.998	Pan_paniscus
ENSFALG00000013428	SHQ1	95	63.448	ENSPPAG00000027714	SHQ1	100	63.636	Pan_paniscus
ENSFALG00000013428	SHQ1	92	64.374	ENSPPRG00000004769	SHQ1	97	64.248	Panthera_pardus
ENSFALG00000013428	SHQ1	92	61.170	ENSPTIG00000011478	SHQ1	97	61.032	Panthera_tigris_altaica
ENSFALG00000013428	SHQ1	95	63.276	ENSPTRG00000015106	SHQ1	99	63.574	Pan_troglodytes
ENSFALG00000013428	SHQ1	95	48.187	ENSPTRG00000048303	-	99	46.312	Pan_troglodytes
ENSFALG00000013428	SHQ1	95	63.903	ENSPANG00000002881	SHQ1	99	64.767	Papio_anubis
ENSFALG00000013428	SHQ1	99	49.100	ENSPKIG00000021517	shq1	98	48.689	Paramormyrops_kingsleyae
ENSFALG00000013428	SHQ1	99	72.623	ENSPSIG00000005536	SHQ1	100	72.951	Pelodiscus_sinensis
ENSFALG00000013428	SHQ1	100	49.268	ENSPMGG00000008838	shq1	99	49.919	Periophthalmus_magnuspinnatus
ENSFALG00000013428	SHQ1	94	59.099	ENSPEMG00000000251	Shq1	99	68.852	Peromyscus_maniculatus_bairdii
ENSFALG00000013428	SHQ1	72	54.688	ENSPMAG00000005372	shq1	94	55.634	Petromyzon_marinus
ENSFALG00000013428	SHQ1	79	58.859	ENSPFOG00000003118	shq1	76	61.848	Poecilia_formosa
ENSFALG00000013428	SHQ1	57	60.227	ENSPMEG00000011076	shq1	71	61.329	Poecilia_mexicana
ENSFALG00000013428	SHQ1	63	59.690	ENSPREG00000000591	shq1	70	59.786	Poecilia_reticulata
ENSFALG00000013428	SHQ1	95	64.310	ENSPPYG00000013717	SHQ1	100	63.793	Pongo_abelii
ENSFALG00000013428	SHQ1	91	65.832	ENSPCAG00000009035	SHQ1	99	64.488	Procavia_capensis
ENSFALG00000013428	SHQ1	94	59.794	ENSPCOG00000008415	SHQ1	99	62.931	Propithecus_coquereli
ENSFALG00000013428	SHQ1	94	63.194	ENSPVAG00000017392	SHQ1	99	63.194	Pteropus_vampyrus
ENSFALG00000013428	SHQ1	70	61.149	ENSPNAG00000026840	shq1	68	61.045	Pygocentrus_nattereri
ENSFALG00000013428	SHQ1	94	60.554	ENSRNOG00000005433	Shq1	93	59.052	Rattus_norvegicus
ENSFALG00000013428	SHQ1	93	60.733	ENSRBIG00000026280	SHQ1	99	60.315	Rhinopithecus_bieti
ENSFALG00000013428	SHQ1	93	63.811	ENSRROG00000034126	SHQ1	99	63.398	Rhinopithecus_roxellana
ENSFALG00000013428	SHQ1	94	56.771	ENSSBOG00000021038	SHQ1	99	57.812	Saimiri_boliviensis_boliviensis
ENSFALG00000013428	SHQ1	91	58.813	ENSSHAG00000015077	SHQ1	98	58.813	Sarcophilus_harrisii
ENSFALG00000013428	SHQ1	73	65.101	ENSSFOG00015016241	shq1	80	65.101	Scleropages_formosus
ENSFALG00000013428	SHQ1	72	62.302	ENSSMAG00000016151	shq1	72	62.077	Scophthalmus_maximus
ENSFALG00000013428	SHQ1	70	63.594	ENSSDUG00000011986	shq1	99	50.155	Seriola_dumerili
ENSFALG00000013428	SHQ1	67	63.592	ENSSLDG00000013908	shq1	99	50.235	Seriola_lalandi_dorsalis
ENSFALG00000013428	SHQ1	95	51.801	ENSSARG00000007119	SHQ1	99	50.171	Sorex_araneus
ENSFALG00000013428	SHQ1	84	67.315	ENSSPUG00000011526	-	95	68.093	Sphenodon_punctatus
ENSFALG00000013428	SHQ1	92	63.894	ENSSSCG00000011518	SHQ1	97	63.894	Sus_scrofa
ENSFALG00000013428	SHQ1	94	92.535	ENSTGUG00000009933	SHQ1	100	92.708	Taeniopygia_guttata
ENSFALG00000013428	SHQ1	67	58.413	ENSTRUG00000009446	shq1	99	46.677	Takifugu_rubripes
ENSFALG00000013428	SHQ1	67	58.034	ENSTNIG00000007354	shq1	91	57.619	Tetraodon_nigroviridis
ENSFALG00000013428	SHQ1	76	82.979	ENSTBEG00000011295	SHQ1	79	82.979	Tupaia_belangeri
ENSFALG00000013428	SHQ1	94	62.284	ENSTTRG00000005320	SHQ1	99	62.284	Tursiops_truncatus
ENSFALG00000013428	SHQ1	92	63.588	ENSUMAG00000024031	SHQ1	97	63.588	Ursus_maritimus
ENSFALG00000013428	SHQ1	71	62.587	ENSVPAG00000004880	SHQ1	97	57.143	Vicugna_pacos
ENSFALG00000013428	SHQ1	93	63.002	ENSVVUG00000013906	SHQ1	98	63.986	Vulpes_vulpes
ENSFALG00000013428	SHQ1	100	52.751	ENSXETG00000032215	shq1	99	53.883	Xenopus_tropicalis