EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000013539 (Gene tree)
Gene ID: -
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 2857 bases
Position: chrJH603195.1:8787279-8790135
Accession: 17341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000014127	PolyA_pol	PF01743.20	8e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000014185	TRNT1-201	1155	-	ENSFALP00000014127	384 (aa)	-	U3KGH3

Gene Model

Click here to download ENSFALG00000013539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000013539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000013539	TRNT1	100	74.545	ENSG00000072756	TRNT1	89	74.545	Homo_sapiens
ENSFALG00000013539	TRNT1	99	68.684	ENSAPOG00000013687	trnt1	89	68.684	Acanthochromis_polyacanthus
ENSFALG00000013539	TRNT1	99	74.093	ENSAMEG00000014520	TRNT1	89	74.093	Ailuropoda_melanoleuca
ENSFALG00000013539	TRNT1	99	68.668	ENSACIG00000021706	trnt1	90	68.668	Amphilophus_citrinellus
ENSFALG00000013539	TRNT1	99	68.407	ENSAOCG00000024612	trnt1	90	68.407	Amphiprion_ocellaris
ENSFALG00000013539	TRNT1	96	61.957	ENSAPEG00000022627	trnt1	85	61.957	Amphiprion_percula
ENSFALG00000013539	TRNT1	99	70.757	ENSATEG00000008928	trnt1	95	70.757	Anabas_testudineus
ENSFALG00000013539	TRNT1	99	91.645	ENSAPLG00000004258	TRNT1	95	91.645	Anas_platyrhynchos
ENSFALG00000013539	TRNT1	98	77.394	ENSACAG00000005657	TRNT1	86	77.394	Anolis_carolinensis
ENSFALG00000013539	TRNT1	100	74.545	ENSANAG00000024802	TRNT1	89	74.545	Aotus_nancymaae
ENSFALG00000013539	TRNT1	99	67.885	ENSACLG00000022227	trnt1	90	67.885	Astatotilapia_calliptera
ENSFALG00000013539	TRNT1	100	69.091	ENSAMXG00000003960	trnt1	89	69.271	Astyanax_mexicanus
ENSFALG00000013539	TRNT1	100	74.805	ENSBTAG00000019534	TRNT1	89	74.805	Bos_taurus
ENSFALG00000013539	TRNT1	98	43.878	WBGene00010089	hpo-31	88	43.878	Caenorhabditis_elegans
ENSFALG00000013539	TRNT1	100	74.805	ENSCJAG00000015466	TRNT1	89	74.805	Callithrix_jacchus
ENSFALG00000013539	TRNT1	99	75.000	ENSCAFG00000005985	TRNT1	88	75.000	Canis_familiaris
ENSFALG00000013539	TRNT1	99	75.000	ENSCAFG00020014746	TRNT1	88	75.000	Canis_lupus_dingo
ENSFALG00000013539	TRNT1	100	75.325	ENSCHIG00000007030	TRNT1	88	75.325	Capra_hircus
ENSFALG00000013539	TRNT1	100	74.805	ENSTSYG00000013390	TRNT1	89	74.805	Carlito_syrichta
ENSFALG00000013539	TRNT1	98	59.524	ENSCAPG00000006891	TRNT1	100	59.524	Cavia_aperea
ENSFALG00000013539	TRNT1	99	73.958	ENSCPOG00000007849	TRNT1	88	73.958	Cavia_porcellus
ENSFALG00000013539	TRNT1	99	74.740	ENSCCAG00000002919	TRNT1	96	74.740	Cebus_capucinus
ENSFALG00000013539	TRNT1	99	74.479	ENSCATG00000031985	TRNT1	87	74.479	Cercocebus_atys
ENSFALG00000013539	TRNT1	99	74.479	ENSCLAG00000005186	TRNT1	88	74.479	Chinchilla_lanigera
ENSFALG00000013539	TRNT1	100	74.805	ENSCSAG00000011052	TRNT1	89	74.805	Chlorocebus_sabaeus
ENSFALG00000013539	TRNT1	83	81.046	ENSCHOG00000005712	TRNT1	73	81.046	Choloepus_hoffmanni
ENSFALG00000013539	TRNT1	100	81.039	ENSCPBG00000017636	TRNT1	88	81.039	Chrysemys_picta_bellii
ENSFALG00000013539	TRNT1	99	46.736	ENSCING00000007069	-	94	46.736	Ciona_intestinalis
ENSFALG00000013539	TRNT1	99	44.675	ENSCSAVG00000007494	-	91	44.675	Ciona_savignyi
ENSFALG00000013539	TRNT1	100	74.805	ENSCANG00000039030	TRNT1	89	74.805	Colobus_angolensis_palliatus
ENSFALG00000013539	TRNT1	100	75.584	ENSCGRG00001009998	Trnt1	89	75.584	Cricetulus_griseus_chok1gshd
ENSFALG00000013539	TRNT1	100	75.584	ENSCGRG00000013410	Trnt1	89	75.584	Cricetulus_griseus_crigri
ENSFALG00000013539	TRNT1	99	69.974	ENSCSEG00000008157	trnt1	94	69.974	Cynoglossus_semilaevis
ENSFALG00000013539	TRNT1	99	68.930	ENSCVAG00000019770	trnt1	90	68.930	Cyprinodon_variegatus
ENSFALG00000013539	TRNT1	99	70.833	ENSDARG00000075297	trnt1	89	70.833	Danio_rerio
ENSFALG00000013539	TRNT1	99	75.000	ENSDNOG00000008837	TRNT1	88	75.000	Dasypus_novemcinctus
ENSFALG00000013539	TRNT1	100	74.545	ENSDORG00000014035	Trnt1	89	74.545	Dipodomys_ordii
ENSFALG00000013539	TRNT1	99	47.927	FBgn0037369	CG2100	80	47.927	Drosophila_melanogaster
ENSFALG00000013539	TRNT1	57	80.275	ENSETEG00000018177	TRNT1	88	80.275	Echinops_telfairi
ENSFALG00000013539	TRNT1	98	64.286	ENSEBUG00000012779	-	89	64.286	Eptatretus_burgeri
ENSFALG00000013539	TRNT1	100	75.584	ENSEASG00005003577	TRNT1	89	75.584	Equus_asinus_asinus
ENSFALG00000013539	TRNT1	100	75.325	ENSECAG00000014420	TRNT1	89	75.325	Equus_caballus
ENSFALG00000013539	TRNT1	99	74.479	ENSEEUG00000009567	TRNT1	88	74.479	Erinaceus_europaeus
ENSFALG00000013539	TRNT1	99	69.271	ENSELUG00000003802	trnt1	89	69.271	Esox_lucius
ENSFALG00000013539	TRNT1	99	75.521	ENSFCAG00000026805	TRNT1	88	75.521	Felis_catus
ENSFALG00000013539	TRNT1	99	74.479	ENSFDAG00000018412	TRNT1	88	74.479	Fukomys_damarensis
ENSFALG00000013539	TRNT1	99	68.668	ENSFHEG00000019294	trnt1	90	68.668	Fundulus_heteroclitus
ENSFALG00000013539	TRNT1	98	69.393	ENSGMOG00000007460	trnt1	89	69.393	Gadus_morhua
ENSFALG00000013539	TRNT1	100	86.719	ENSGALG00000017368	TRNT1	89	86.719	Gallus_gallus
ENSFALG00000013539	TRNT1	99	71.802	ENSGAFG00000008647	trnt1	90	71.802	Gambusia_affinis
ENSFALG00000013539	TRNT1	99	68.325	ENSGACG00000011903	trnt1	96	68.325	Gasterosteus_aculeatus
ENSFALG00000013539	TRNT1	100	81.558	ENSGAGG00000020942	TRNT1	88	81.558	Gopherus_agassizii
ENSFALG00000013539	TRNT1	100	74.545	ENSGGOG00000015286	TRNT1	89	74.545	Gorilla_gorilla
ENSFALG00000013539	TRNT1	99	67.624	ENSHBUG00000002797	trnt1	90	67.624	Haplochromis_burtoni
ENSFALG00000013539	TRNT1	99	74.479	ENSHGLG00000003649	TRNT1	88	74.479	Heterocephalus_glaber_female
ENSFALG00000013539	TRNT1	99	69.870	ENSHGLG00000000221	-	88	69.870	Heterocephalus_glaber_female
ENSFALG00000013539	TRNT1	99	73.698	ENSHGLG00100016421	TRNT1	88	73.698	Heterocephalus_glaber_male
ENSFALG00000013539	TRNT1	99	67.102	ENSHCOG00000010618	trnt1	90	67.102	Hippocampus_comes
ENSFALG00000013539	TRNT1	99	68.750	ENSIPUG00000000971	trnt1	89	68.750	Ictalurus_punctatus
ENSFALG00000013539	TRNT1	100	75.781	ENSSTOG00000000150	TRNT1	88	75.781	Ictidomys_tridecemlineatus
ENSFALG00000013539	TRNT1	100	74.805	ENSJJAG00000018561	Trnt1	89	74.805	Jaculus_jaculus
ENSFALG00000013539	TRNT1	99	68.668	ENSKMAG00000011307	trnt1	90	68.668	Kryptolebias_marmoratus
ENSFALG00000013539	TRNT1	96	65.761	ENSLBEG00000019457	trnt1	86	65.761	Labrus_bergylta
ENSFALG00000013539	TRNT1	100	75.065	ENSLACG00000013227	TRNT1	89	75.065	Latimeria_chalumnae
ENSFALG00000013539	TRNT1	100	72.656	ENSLOCG00000011105	trnt1	88	72.656	Lepisosteus_oculatus
ENSFALG00000013539	TRNT1	99	75.521	ENSLAFG00000023191	TRNT1	88	75.521	Loxodonta_africana
ENSFALG00000013539	TRNT1	99	74.740	ENSMFAG00000045113	TRNT1	87	74.740	Macaca_fascicularis
ENSFALG00000013539	TRNT1	99	74.740	ENSMMUG00000017983	TRNT1	87	74.740	Macaca_mulatta
ENSFALG00000013539	TRNT1	99	74.740	ENSMNEG00000037805	TRNT1	87	74.740	Macaca_nemestrina
ENSFALG00000013539	TRNT1	99	74.607	ENSMLEG00000033671	TRNT1	99	74.607	Mandrillus_leucophaeus
ENSFALG00000013539	TRNT1	99	69.191	ENSMAMG00000023401	trnt1	90	69.191	Mastacembelus_armatus
ENSFALG00000013539	TRNT1	99	67.885	ENSMZEG00005009141	trnt1	90	67.885	Maylandia_zebra
ENSFALG00000013539	TRNT1	83	86.562	ENSMGAG00000009971	TRNT1	100	86.562	Meleagris_gallopavo
ENSFALG00000013539	TRNT1	100	75.844	ENSMAUG00000020707	Trnt1	89	75.844	Mesocricetus_auratus
ENSFALG00000013539	TRNT1	99	76.042	ENSMICG00000016615	TRNT1	88	76.042	Microcebus_murinus
ENSFALG00000013539	TRNT1	100	75.844	ENSMOCG00000004539	Trnt1	89	75.844	Microtus_ochrogaster
ENSFALG00000013539	TRNT1	99	68.668	ENSMMOG00000010742	trnt1	90	68.668	Mola_mola
ENSFALG00000013539	TRNT1	100	78.182	ENSMODG00000004368	TRNT1	89	78.182	Monodelphis_domestica
ENSFALG00000013539	TRNT1	99	67.624	ENSMALG00000008376	trnt1	89	67.624	Monopterus_albus
ENSFALG00000013539	TRNT1	100	74.805	MGP_CAROLIEiJ_G0028698	Trnt1	89	74.805	Mus_caroli
ENSFALG00000013539	TRNT1	100	74.805	ENSMUSG00000013736	Trnt1	89	74.805	Mus_musculus
ENSFALG00000013539	TRNT1	100	75.065	MGP_PahariEiJ_G0022449	Trnt1	89	75.065	Mus_pahari
ENSFALG00000013539	TRNT1	100	74.805	MGP_SPRETEiJ_G0029726	Trnt1	89	74.805	Mus_spretus
ENSFALG00000013539	TRNT1	99	75.521	ENSMPUG00000017017	TRNT1	88	75.521	Mustela_putorius_furo
ENSFALG00000013539	TRNT1	99	75.260	ENSMLUG00000011864	TRNT1	99	75.260	Myotis_lucifugus
ENSFALG00000013539	TRNT1	100	74.805	ENSNGAG00000000537	Trnt1	89	74.805	Nannospalax_galili
ENSFALG00000013539	TRNT1	79	67.987	ENSNBRG00000023606	trnt1	87	67.987	Neolamprologus_brichardi
ENSFALG00000013539	TRNT1	100	74.545	ENSNLEG00000003226	TRNT1	89	74.545	Nomascus_leucogenys
ENSFALG00000013539	TRNT1	100	78.182	ENSMEUG00000004684	TRNT1	89	78.182	Notamacropus_eugenii
ENSFALG00000013539	TRNT1	99	69.974	ENSOPRG00000015067	TRNT1	99	69.974	Ochotona_princeps
ENSFALG00000013539	TRNT1	99	74.219	ENSODEG00000007597	TRNT1	88	74.219	Octodon_degus
ENSFALG00000013539	TRNT1	99	68.146	ENSONIG00000020273	trnt1	88	68.146	Oreochromis_niloticus
ENSFALG00000013539	TRNT1	99	74.151	ENSOANG00000007514	TRNT1	88	74.151	Ornithorhynchus_anatinus
ENSFALG00000013539	TRNT1	100	74.286	ENSOCUG00000008580	TRNT1	89	74.286	Oryctolagus_cuniculus
ENSFALG00000013539	TRNT1	99	67.277	ENSORLG00000003165	trnt1	90	67.277	Oryzias_latipes
ENSFALG00000013539	TRNT1	99	67.801	ENSORLG00020022060	trnt1	90	67.801	Oryzias_latipes_hni
ENSFALG00000013539	TRNT1	99	67.016	ENSORLG00015018915	trnt1	90	67.016	Oryzias_latipes_hsok
ENSFALG00000013539	TRNT1	99	65.274	ENSOMEG00000003331	trnt1	91	65.274	Oryzias_melastigma
ENSFALG00000013539	TRNT1	100	75.325	ENSOARG00000008631	TRNT1	88	75.325	Ovis_aries
ENSFALG00000013539	TRNT1	100	74.805	ENSPPAG00000043566	TRNT1	89	74.805	Pan_paniscus
ENSFALG00000013539	TRNT1	99	75.260	ENSPPRG00000001327	TRNT1	88	75.260	Panthera_pardus
ENSFALG00000013539	TRNT1	99	75.260	ENSPTIG00000011448	TRNT1	88	75.260	Panthera_tigris_altaica
ENSFALG00000013539	TRNT1	100	74.545	ENSPTRG00000014564	TRNT1	89	74.545	Pan_troglodytes
ENSFALG00000013539	TRNT1	99	74.479	ENSPANG00000025944	TRNT1	87	74.479	Papio_anubis
ENSFALG00000013539	TRNT1	99	72.895	ENSPKIG00000020015	trnt1	88	72.895	Paramormyrops_kingsleyae
ENSFALG00000013539	TRNT1	99	81.510	ENSPSIG00000017356	TRNT1	99	80.833	Pelodiscus_sinensis
ENSFALG00000013539	TRNT1	99	70.235	ENSPMGG00000008888	trnt1	88	70.235	Periophthalmus_magnuspinnatus
ENSFALG00000013539	TRNT1	100	74.805	ENSPEMG00000019845	Trnt1	89	74.805	Peromyscus_maniculatus_bairdii
ENSFALG00000013539	TRNT1	100	77.922	ENSPCIG00000030436	TRNT1	89	77.922	Phascolarctos_cinereus
ENSFALG00000013539	TRNT1	99	71.802	ENSPFOG00000006194	trnt1	90	71.802	Poecilia_formosa
ENSFALG00000013539	TRNT1	99	71.802	ENSPLAG00000015623	trnt1	95	71.802	Poecilia_latipinna
ENSFALG00000013539	TRNT1	99	71.540	ENSPMEG00000012216	trnt1	95	71.540	Poecilia_mexicana
ENSFALG00000013539	TRNT1	99	71.728	ENSPREG00000021470	trnt1	90	71.728	Poecilia_reticulata
ENSFALG00000013539	TRNT1	100	74.805	ENSPPYG00000013702	TRNT1	89	74.805	Pongo_abelii
ENSFALG00000013539	TRNT1	99	74.935	ENSPCAG00000001951	TRNT1	100	74.935	Procavia_capensis
ENSFALG00000013539	TRNT1	99	75.521	ENSPCOG00000022228	TRNT1	88	75.521	Propithecus_coquereli
ENSFALG00000013539	TRNT1	99	73.698	ENSPVAG00000008784	TRNT1	100	73.698	Pteropus_vampyrus
ENSFALG00000013539	TRNT1	99	67.363	ENSPNYG00000003120	trnt1	90	67.363	Pundamilia_nyererei
ENSFALG00000013539	TRNT1	99	68.229	ENSPNAG00000000565	trnt1	89	68.229	Pygocentrus_nattereri
ENSFALG00000013539	TRNT1	100	75.584	ENSRNOG00000006432	Trnt1	89	75.584	Rattus_norvegicus
ENSFALG00000013539	TRNT1	100	73.506	ENSRBIG00000042632	TRNT1	88	73.506	Rhinopithecus_bieti
ENSFALG00000013539	TRNT1	100	74.286	ENSRROG00000036866	TRNT1	89	74.286	Rhinopithecus_roxellana
ENSFALG00000013539	TRNT1	100	74.026	ENSSBOG00000021208	TRNT1	89	74.026	Saimiri_boliviensis_boliviensis
ENSFALG00000013539	TRNT1	99	77.344	ENSSHAG00000018861	TRNT1	88	77.344	Sarcophilus_harrisii
ENSFALG00000013539	TRNT1	99	72.632	ENSSFOG00015020844	trnt1	88	72.632	Scleropages_formosus
ENSFALG00000013539	TRNT1	99	69.191	ENSSMAG00000015432	trnt1	88	69.191	Scophthalmus_maximus
ENSFALG00000013539	TRNT1	99	68.146	ENSSDUG00000012320	trnt1	90	68.146	Seriola_dumerili
ENSFALG00000013539	TRNT1	99	68.146	ENSSLDG00000009325	trnt1	90	68.146	Seriola_lalandi_dorsalis
ENSFALG00000013539	TRNT1	67	61.004	ENSSLDG00000016463	-	91	64.017	Seriola_lalandi_dorsalis
ENSFALG00000013539	TRNT1	99	79.688	ENSSPUG00000014153	TRNT1	100	79.688	Sphenodon_punctatus
ENSFALG00000013539	TRNT1	99	67.624	ENSSPAG00000021005	trnt1	90	67.624	Stegastes_partitus
ENSFALG00000013539	TRNT1	100	74.545	ENSSSCG00000011529	TRNT1	89	74.545	Sus_scrofa
ENSFALG00000013539	TRNT1	100	96.094	ENSTGUG00000010192	TRNT1	95	96.094	Taeniopygia_guttata
ENSFALG00000013539	TRNT1	99	67.624	ENSTRUG00000001088	trnt1	90	67.624	Takifugu_rubripes
ENSFALG00000013539	TRNT1	99	68.930	ENSTNIG00000007363	trnt1	88	68.930	Tetraodon_nigroviridis
ENSFALG00000013539	TRNT1	65	59.839	ENSTBEG00000006367	TRNT1	81	59.839	Tupaia_belangeri
ENSFALG00000013539	TRNT1	100	74.545	ENSTTRG00000007803	TRNT1	89	74.545	Tursiops_truncatus
ENSFALG00000013539	TRNT1	99	75.000	ENSUAMG00000022574	TRNT1	88	75.000	Ursus_americanus
ENSFALG00000013539	TRNT1	99	74.740	ENSUMAG00000024092	TRNT1	88	74.740	Ursus_maritimus
ENSFALG00000013539	TRNT1	99	75.000	ENSVVUG00000012810	TRNT1	88	75.000	Vulpes_vulpes
ENSFALG00000013539	TRNT1	99	69.474	ENSXETG00000025091	trnt1	94	69.474	Xenopus_tropicalis
ENSFALG00000013539	TRNT1	99	71.802	ENSXCOG00000010150	trnt1	90	71.802	Xiphophorus_couchianus
ENSFALG00000013539	TRNT1	99	72.063	ENSXMAG00000002227	trnt1	90	72.063	Xiphophorus_maculatus