EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000013575 (Gene tree)
Gene ID: -
Gene Symbol: TRMT6
Alias: CGI-09|GCD10|Gcd10p|MGC5029
Full Name: tRNA methyltransferase 6
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 10819 bases
Position: chrJH603223.1:3218428-3229246
Accession: 20900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000014169	Gcd10p	PF04189.13	7.4e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000014228	TRMT6-201	1374	-	ENSFALP00000014169	457 (aa)	-	U3KGL5

Gene Model

Click here to download ENSFALG00000013575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000013575's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000013575	TRMT6	97	75.442	ENSG00000089195	TRMT6	98	70.062	Homo_sapiens
ENSFALG00000013575	TRMT6	98	61.233	ENSAPOG00000008036	trmt6	92	60.265	Acanthochromis_polyacanthus
ENSFALG00000013575	TRMT6	97	74.779	ENSAMEG00000010635	TRMT6	90	74.336	Ailuropoda_melanoleuca
ENSFALG00000013575	TRMT6	98	56.444	ENSACIG00000004608	trmt6	91	56.125	Amphilophus_citrinellus
ENSFALG00000013575	TRMT6	98	58.444	ENSAOCG00000024322	trmt6	92	58.129	Amphiprion_ocellaris
ENSFALG00000013575	TRMT6	98	60.889	ENSAPEG00000017334	trmt6	92	60.802	Amphiprion_percula
ENSFALG00000013575	TRMT6	99	60.879	ENSATEG00000018498	trmt6	98	60.659	Anabas_testudineus
ENSFALG00000013575	TRMT6	99	91.372	ENSAPLG00000007761	TRMT6	99	91.372	Anas_platyrhynchos
ENSFALG00000013575	TRMT6	98	75.111	ENSACAG00000000575	TRMT6	93	73.111	Anolis_carolinensis
ENSFALG00000013575	TRMT6	97	75.000	ENSANAG00000021260	TRMT6	90	74.336	Aotus_nancymaae
ENSFALG00000013575	TRMT6	98	57.778	ENSACLG00000026034	trmt6	91	57.461	Astatotilapia_calliptera
ENSFALG00000013575	TRMT6	98	58.811	ENSAMXG00000017116	trmt6	90	57.269	Astyanax_mexicanus
ENSFALG00000013575	TRMT6	97	75.221	ENSBTAG00000001314	TRMT6	90	74.558	Bos_taurus
ENSFALG00000013575	TRMT6	97	75.221	ENSCJAG00000021296	TRMT6	90	74.558	Callithrix_jacchus
ENSFALG00000013575	TRMT6	97	75.000	ENSCAFG00000005969	TRMT6	90	74.558	Canis_familiaris
ENSFALG00000013575	TRMT6	97	75.000	ENSCAFG00020000777	TRMT6	90	74.558	Canis_lupus_dingo
ENSFALG00000013575	TRMT6	97	75.000	ENSCHIG00000010338	TRMT6	90	74.336	Capra_hircus
ENSFALG00000013575	TRMT6	97	76.106	ENSTSYG00000004286	TRMT6	90	75.442	Carlito_syrichta
ENSFALG00000013575	TRMT6	88	73.966	ENSCAPG00000015467	TRMT6	90	72.886	Cavia_aperea
ENSFALG00000013575	TRMT6	97	74.336	ENSCPOG00000013809	TRMT6	90	73.673	Cavia_porcellus
ENSFALG00000013575	TRMT6	97	74.779	ENSCCAG00000026939	TRMT6	90	74.115	Cebus_capucinus
ENSFALG00000013575	TRMT6	97	75.664	ENSCATG00000041111	TRMT6	90	75.000	Cercocebus_atys
ENSFALG00000013575	TRMT6	97	74.558	ENSCLAG00000013978	TRMT6	90	73.894	Chinchilla_lanigera
ENSFALG00000013575	TRMT6	97	75.885	ENSCSAG00000013461	TRMT6	90	75.221	Chlorocebus_sabaeus
ENSFALG00000013575	TRMT6	72	64.759	ENSCHOG00000012537	TRMT6	66	64.458	Choloepus_hoffmanni
ENSFALG00000013575	TRMT6	99	85.022	ENSCPBG00000023406	TRMT6	94	85.022	Chrysemys_picta_bellii
ENSFALG00000013575	TRMT6	91	36.782	ENSCING00000002472	-	88	35.545	Ciona_intestinalis
ENSFALG00000013575	TRMT6	92	40.654	ENSCSAVG00000001680	-	90	37.408	Ciona_savignyi
ENSFALG00000013575	TRMT6	97	75.442	ENSCANG00000002381	TRMT6	90	74.779	Colobus_angolensis_palliatus
ENSFALG00000013575	TRMT6	97	74.779	ENSCGRG00001003385	Trmt6	90	74.558	Cricetulus_griseus_chok1gshd
ENSFALG00000013575	TRMT6	97	74.779	ENSCGRG00000006540	Trmt6	90	74.558	Cricetulus_griseus_crigri
ENSFALG00000013575	TRMT6	98	60.134	ENSCSEG00000002228	trmt6	92	58.575	Cynoglossus_semilaevis
ENSFALG00000013575	TRMT6	98	57.709	ENSCVAG00000000341	trmt6	92	57.048	Cyprinodon_variegatus
ENSFALG00000013575	TRMT6	98	58.797	ENSDARG00000042344	trmt6	90	57.906	Danio_rerio
ENSFALG00000013575	TRMT6	98	69.872	ENSDNOG00000012785	TRMT6	91	70.806	Dasypus_novemcinctus
ENSFALG00000013575	TRMT6	97	74.558	ENSDORG00000006458	Trmt6	91	73.894	Dipodomys_ordii
ENSFALG00000013575	TRMT6	90	31.019	FBgn0031832	CG9596	75	30.894	Drosophila_melanogaster
ENSFALG00000013575	TRMT6	54	85.606	ENSETEG00000003490	-	52	85.606	Echinops_telfairi
ENSFALG00000013575	TRMT6	55	48.207	ENSETEG00000017282	-	74	45.525	Echinops_telfairi
ENSFALG00000013575	TRMT6	97	75.000	ENSEASG00005001411	TRMT6	91	75.000	Equus_asinus_asinus
ENSFALG00000013575	TRMT6	97	74.779	ENSECAG00000023914	TRMT6	90	74.779	Equus_caballus
ENSFALG00000013575	TRMT6	99	73.144	ENSEEUG00000006635	TRMT6	92	72.489	Erinaceus_europaeus
ENSFALG00000013575	TRMT6	98	59.243	ENSELUG00000013378	trmt6	75	58.590	Esox_lucius
ENSFALG00000013575	TRMT6	97	74.779	ENSFCAG00000003102	TRMT6	90	74.115	Felis_catus
ENSFALG00000013575	TRMT6	97	73.894	ENSFDAG00000015117	TRMT6	90	73.009	Fukomys_damarensis
ENSFALG00000013575	TRMT6	98	57.684	ENSFHEG00000019957	trmt6	93	56.264	Fundulus_heteroclitus
ENSFALG00000013575	TRMT6	81	67.965	ENSGMOG00000011059	trmt6	91	67.965	Gadus_morhua
ENSFALG00000013575	TRMT6	99	88.914	ENSGALG00000009169	TRMT6	93	88.914	Gallus_gallus
ENSFALG00000013575	TRMT6	98	58.940	ENSGAFG00000008618	trmt6	92	57.395	Gambusia_affinis
ENSFALG00000013575	TRMT6	98	57.494	ENSGACG00000012471	trmt6	92	57.047	Gasterosteus_aculeatus
ENSFALG00000013575	TRMT6	99	85.366	ENSGAGG00000008464	TRMT6	99	85.366	Gopherus_agassizii
ENSFALG00000013575	TRMT6	97	75.664	ENSGGOG00000008597	TRMT6	90	75.000	Gorilla_gorilla
ENSFALG00000013575	TRMT6	98	57.778	ENSHBUG00000016631	trmt6	92	57.461	Haplochromis_burtoni
ENSFALG00000013575	TRMT6	97	74.336	ENSHGLG00000015405	TRMT6	90	73.009	Heterocephalus_glaber_female
ENSFALG00000013575	TRMT6	97	74.336	ENSHGLG00100004120	TRMT6	90	73.009	Heterocephalus_glaber_male
ENSFALG00000013575	TRMT6	98	58.407	ENSHCOG00000000118	trmt6	92	57.965	Hippocampus_comes
ENSFALG00000013575	TRMT6	98	60.573	ENSIPUG00000019365	trmt6	93	59.031	Ictalurus_punctatus
ENSFALG00000013575	TRMT6	97	74.336	ENSSTOG00000006863	TRMT6	90	73.673	Ictidomys_tridecemlineatus
ENSFALG00000013575	TRMT6	99	73.478	ENSJJAG00000007315	Trmt6	91	72.826	Jaculus_jaculus
ENSFALG00000013575	TRMT6	98	59.560	ENSKMAG00000001295	trmt6	93	58.952	Kryptolebias_marmoratus
ENSFALG00000013575	TRMT6	98	58.093	ENSLBEG00000025654	trmt6	92	57.549	Labrus_bergylta
ENSFALG00000013575	TRMT6	98	67.333	ENSLACG00000016478	TRMT6	91	67.111	Latimeria_chalumnae
ENSFALG00000013575	TRMT6	98	64.302	ENSLOCG00000016451	trmt6	92	64.080	Lepisosteus_oculatus
ENSFALG00000013575	TRMT6	97	75.000	ENSLAFG00000032216	TRMT6	90	74.779	Loxodonta_africana
ENSFALG00000013575	TRMT6	97	75.664	ENSMFAG00000044360	TRMT6	90	75.000	Macaca_fascicularis
ENSFALG00000013575	TRMT6	97	75.664	ENSMMUG00000013728	TRMT6	90	75.000	Macaca_mulatta
ENSFALG00000013575	TRMT6	97	75.664	ENSMNEG00000041831	TRMT6	90	75.000	Macaca_nemestrina
ENSFALG00000013575	TRMT6	97	75.885	ENSMLEG00000040762	TRMT6	90	75.221	Mandrillus_leucophaeus
ENSFALG00000013575	TRMT6	98	60.667	ENSMAMG00000012101	trmt6	92	60.444	Mastacembelus_armatus
ENSFALG00000013575	TRMT6	98	57.778	ENSMZEG00005010771	trmt6	91	57.461	Maylandia_zebra
ENSFALG00000013575	TRMT6	99	88.914	ENSMGAG00000007678	TRMT6	93	88.914	Meleagris_gallopavo
ENSFALG00000013575	TRMT6	97	74.115	ENSMAUG00000008719	Trmt6	90	73.894	Mesocricetus_auratus
ENSFALG00000013575	TRMT6	97	75.000	ENSMICG00000011626	TRMT6	90	74.558	Microcebus_murinus
ENSFALG00000013575	TRMT6	97	73.451	ENSMOCG00000022320	Trmt6	90	73.451	Microtus_ochrogaster
ENSFALG00000013575	TRMT6	98	54.667	ENSMMOG00000004412	trmt6	91	54.444	Mola_mola
ENSFALG00000013575	TRMT6	98	72.444	ENSMODG00000003784	TRMT6	91	72.000	Monodelphis_domestica
ENSFALG00000013575	TRMT6	98	55.679	ENSMALG00000018140	trmt6	90	55.902	Monopterus_albus
ENSFALG00000013575	TRMT6	97	72.566	MGP_CAROLIEiJ_G0024344	Trmt6	90	73.009	Mus_caroli
ENSFALG00000013575	TRMT6	97	72.345	ENSMUSG00000037376	Trmt6	90	72.788	Mus_musculus
ENSFALG00000013575	TRMT6	97	73.894	MGP_PahariEiJ_G0025789	Trmt6	90	73.673	Mus_pahari
ENSFALG00000013575	TRMT6	97	72.566	MGP_SPRETEiJ_G0025264	Trmt6	90	72.788	Mus_spretus
ENSFALG00000013575	TRMT6	86	76.456	ENSMPUG00000006317	TRMT6	84	75.696	Mustela_putorius_furo
ENSFALG00000013575	TRMT6	97	74.558	ENSMLUG00000006491	TRMT6	90	73.894	Myotis_lucifugus
ENSFALG00000013575	TRMT6	97	72.345	ENSNGAG00000015251	Trmt6	90	71.681	Nannospalax_galili
ENSFALG00000013575	TRMT6	98	54.889	ENSNBRG00000020261	trmt6	91	54.566	Neolamprologus_brichardi
ENSFALG00000013575	TRMT6	97	76.106	ENSNLEG00000013957	TRMT6	90	75.442	Nomascus_leucogenys
ENSFALG00000013575	TRMT6	86	73.165	ENSMEUG00000009179	TRMT6	93	71.642	Notamacropus_eugenii
ENSFALG00000013575	TRMT6	97	73.510	ENSOPRG00000008564	TRMT6	92	71.523	Ochotona_princeps
ENSFALG00000013575	TRMT6	97	74.115	ENSODEG00000005657	TRMT6	90	73.673	Octodon_degus
ENSFALG00000013575	TRMT6	98	57.930	ENSONIG00000000968	trmt6	92	57.461	Oreochromis_niloticus
ENSFALG00000013575	TRMT6	99	77.876	ENSOANG00000008403	-	100	77.876	Ornithorhynchus_anatinus
ENSFALG00000013575	TRMT6	97	75.442	ENSOCUG00000014669	TRMT6	90	74.779	Oryctolagus_cuniculus
ENSFALG00000013575	TRMT6	98	56.319	ENSORLG00000009862	trmt6	92	55.876	Oryzias_latipes
ENSFALG00000013575	TRMT6	98	55.876	ENSORLG00020001466	trmt6	92	55.654	Oryzias_latipes_hni
ENSFALG00000013575	TRMT6	98	56.319	ENSORLG00015015552	trmt6	92	55.876	Oryzias_latipes_hsok
ENSFALG00000013575	TRMT6	98	54.788	ENSOMEG00000019874	trmt6	92	54.084	Oryzias_melastigma
ENSFALG00000013575	TRMT6	97	74.779	ENSOGAG00000012950	TRMT6	90	74.115	Otolemur_garnettii
ENSFALG00000013575	TRMT6	97	75.000	ENSOARG00000017993	TRMT6	90	74.336	Ovis_aries
ENSFALG00000013575	TRMT6	97	75.276	ENSPPAG00000036809	TRMT6	90	74.614	Pan_paniscus
ENSFALG00000013575	TRMT6	97	74.779	ENSPPRG00000000424	TRMT6	90	74.115	Panthera_pardus
ENSFALG00000013575	TRMT6	97	74.779	ENSPTIG00000010629	TRMT6	90	74.115	Panthera_tigris_altaica
ENSFALG00000013575	TRMT6	97	75.885	ENSPTRG00000013231	TRMT6	98	70.679	Pan_troglodytes
ENSFALG00000013575	TRMT6	97	75.885	ENSPANG00000009284	TRMT6	90	75.221	Papio_anubis
ENSFALG00000013575	TRMT6	98	62.555	ENSPKIG00000003441	trmt6	91	60.841	Paramormyrops_kingsleyae
ENSFALG00000013575	TRMT6	99	82.857	ENSPSIG00000017048	TRMT6	94	82.857	Pelodiscus_sinensis
ENSFALG00000013575	TRMT6	92	57.720	ENSPMGG00000021074	trmt6	87	58.531	Periophthalmus_magnuspinnatus
ENSFALG00000013575	TRMT6	97	73.009	ENSPEMG00000023268	Trmt6	90	73.009	Peromyscus_maniculatus_bairdii
ENSFALG00000013575	TRMT6	98	72.829	ENSPCIG00000001546	TRMT6	88	72.606	Phascolarctos_cinereus
ENSFALG00000013575	TRMT6	98	58.537	ENSPFOG00000003037	trmt6	92	56.018	Poecilia_formosa
ENSFALG00000013575	TRMT6	98	59.243	ENSPLAG00000005143	trmt6	92	56.608	Poecilia_latipinna
ENSFALG00000013575	TRMT6	98	59.243	ENSPMEG00000014875	trmt6	92	57.363	Poecilia_mexicana
ENSFALG00000013575	TRMT6	98	55.457	ENSPREG00000016227	trmt6	91	54.343	Poecilia_reticulata
ENSFALG00000013575	TRMT6	97	76.327	ENSPPYG00000010691	TRMT6	90	75.664	Pongo_abelii
ENSFALG00000013575	TRMT6	97	73.894	ENSPCAG00000012098	TRMT6	90	74.558	Procavia_capensis
ENSFALG00000013575	TRMT6	97	74.779	ENSPCOG00000020723	TRMT6	90	74.115	Propithecus_coquereli
ENSFALG00000013575	TRMT6	97	70.796	ENSPVAG00000007539	TRMT6	90	70.796	Pteropus_vampyrus
ENSFALG00000013575	TRMT6	98	56.222	ENSPNYG00000000918	trmt6	92	55.902	Pundamilia_nyererei
ENSFALG00000013575	TRMT6	98	58.407	ENSPNAG00000019279	trmt6	91	58.407	Pygocentrus_nattereri
ENSFALG00000013575	TRMT6	97	72.566	ENSRNOG00000021270	Trmt6	90	71.903	Rattus_norvegicus
ENSFALG00000013575	TRMT6	97	75.664	ENSRBIG00000031132	TRMT6	90	75.000	Rhinopithecus_bieti
ENSFALG00000013575	TRMT6	97	75.885	ENSRROG00000045329	TRMT6	90	75.221	Rhinopithecus_roxellana
ENSFALG00000013575	TRMT6	66	31.613	YNL062C	GCD10	50	31.818	Saccharomyces_cerevisiae
ENSFALG00000013575	TRMT6	79	72.432	ENSSBOG00000019803	-	90	71.622	Saimiri_boliviensis_boliviensis
ENSFALG00000013575	TRMT6	97	74.779	ENSSBOG00000033602	-	90	74.115	Saimiri_boliviensis_boliviensis
ENSFALG00000013575	TRMT6	98	72.467	ENSSHAG00000010754	TRMT6	90	71.150	Sarcophilus_harrisii
ENSFALG00000013575	TRMT6	98	63.717	ENSSFOG00015008429	trmt6	92	63.029	Scleropages_formosus
ENSFALG00000013575	TRMT6	98	59.465	ENSSMAG00000005352	trmt6	92	59.465	Scophthalmus_maximus
ENSFALG00000013575	TRMT6	98	61.024	ENSSDUG00000008294	trmt6	92	61.024	Seriola_dumerili
ENSFALG00000013575	TRMT6	98	61.470	ENSSLDG00000002180	trmt6	92	61.148	Seriola_lalandi_dorsalis
ENSFALG00000013575	TRMT6	97	68.805	ENSSARG00000005487	TRMT6	90	68.142	Sorex_araneus
ENSFALG00000013575	TRMT6	98	60.265	ENSSPAG00000011628	trmt6	92	60.889	Stegastes_partitus
ENSFALG00000013575	TRMT6	97	74.336	ENSSSCG00000007046	TRMT6	65	74.115	Sus_scrofa
ENSFALG00000013575	TRMT6	99	97.137	ENSTGUG00000002195	TRMT6	94	97.137	Taeniopygia_guttata
ENSFALG00000013575	TRMT6	98	53.915	ENSTRUG00000007153	trmt6	91	53.452	Takifugu_rubripes
ENSFALG00000013575	TRMT6	98	58.222	ENSTNIG00000010726	TRMT6	92	57.650	Tetraodon_nigroviridis
ENSFALG00000013575	TRMT6	61	73.649	ENSTBEG00000016317	TRMT6	56	73.649	Tupaia_belangeri
ENSFALG00000013575	TRMT6	97	75.388	ENSTTRG00000012889	TRMT6	90	74.723	Tursiops_truncatus
ENSFALG00000013575	TRMT6	97	74.558	ENSUAMG00000008674	TRMT6	90	73.894	Ursus_americanus
ENSFALG00000013575	TRMT6	97	75.221	ENSUMAG00000004999	TRMT6	90	74.558	Ursus_maritimus
ENSFALG00000013575	TRMT6	97	74.945	ENSVPAG00000002371	TRMT6	89	74.279	Vicugna_pacos
ENSFALG00000013575	TRMT6	97	75.000	ENSVVUG00000023370	TRMT6	90	74.558	Vulpes_vulpes
ENSFALG00000013575	TRMT6	98	66.741	ENSXETG00000004501	trmt6	92	65.188	Xenopus_tropicalis
ENSFALG00000013575	TRMT6	98	53.898	ENSXCOG00000007761	trmt6	91	53.007	Xiphophorus_couchianus
ENSFALG00000013575	TRMT6	98	58.575	ENSXMAG00000008592	trmt6	92	57.080	Xiphophorus_maculatus