EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000013624 (Gene tree)
Gene ID: -
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 8630 bases
Position: chrJH603223.1:4365256-4373885
Accession: 101807437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000014216	MMR_HSR1	PF01926.23	8.4e-06	1	1
ENSFALP00000014218	MMR_HSR1	PF01926.23	9.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000014275	RAB1A-201	2713	-	ENSFALP00000014216	205 (aa)	-	U3KGR2
ENSFALT00000014277	RAB1A-202	2737	XM_016297167	ENSFALP00000014218	213 (aa)	XP_016152653	U3KGR4

Gene Model

Click here to download ENSFALG00000013624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000013624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000013624	RAB1A	80	37.576	ENSFALG00000003867	KRAS	95	35.912
ENSFALG00000013624	RAB1A	99	32.683	ENSFALG00000003276	-	93	32.683
ENSFALG00000013624	RAB1A	85	44.444	ENSFALG00000011581	RAB33A	95	40.670
ENSFALG00000013624	RAB1A	67	30.714	ENSFALG00000008757	-	68	30.714
ENSFALG00000013624	RAB1A	99	39.614	ENSFALG00000004886	RAB33B	90	39.614
ENSFALG00000013624	RAB1A	71	36.301	ENSFALG00000001708	RAB23	66	36.076
ENSFALG00000013624	RAB1A	95	44.286	ENSFALG00000010052	RAB11A	99	44.286
ENSFALG00000013624	RAB1A	90	51.892	ENSFALG00000007652	RAB35	93	50.500
ENSFALG00000013624	RAB1A	94	39.394	ENSFALG00000008011	RAB6A	93	39.394
ENSFALG00000013624	RAB1A	77	41.615	ENSFALG00000007362	RAB36	60	41.615
ENSFALG00000013624	RAB1A	80	35.928	ENSFALG00000013196	MRAS	80	35.928
ENSFALG00000013624	RAB1A	95	44.330	ENSFALG00000009239	RAB5A	90	44.330
ENSFALG00000013624	RAB1A	88	31.217	ENSFALG00000008621	RASL11A	79	31.217
ENSFALG00000013624	RAB1A	84	35.028	ENSFALG00000012145	HRAS	93	35.028
ENSFALG00000013624	RAB1A	83	44.767	ENSFALG00000000201	RAB39B	81	44.767
ENSFALG00000013624	RAB1A	62	31.111	ENSFALG00000014498	ARL4A	67	31.111
ENSFALG00000013624	RAB1A	78	38.037	ENSFALG00000015159	RAB9A	81	38.037
ENSFALG00000013624	RAB1A	76	39.623	ENSFALG00000015153	RAB9B	79	39.623
ENSFALG00000013624	RAB1A	81	51.807	ENSFALG00000011828	-	76	51.807
ENSFALG00000013624	RAB1A	71	30.137	ENSFALG00000008720	ARL3	75	30.137
ENSFALG00000013624	RAB1A	83	37.791	ENSFALG00000012783	RAB17	80	37.791
ENSFALG00000013624	RAB1A	57	31.933	ENSFALG00000015098	ARL4C	61	31.933
ENSFALG00000013624	RAB1A	96	38.424	ENSFALG00000001373	-	95	38.424
ENSFALG00000013624	RAB1A	78	39.264	ENSFALG00000007930	RAB7A	79	39.264
ENSFALG00000013624	RAB1A	89	46.196	ENSFALG00000007160	RAB18	93	45.128
ENSFALG00000013624	RAB1A	80	51.220	ENSFALG00000007765	RAB30	81	51.220
ENSFALG00000013624	RAB1A	82	50.000	ENSFALG00000003709	RAB19	79	50.000
ENSFALG00000013624	RAB1A	91	47.849	ENSFALG00000005613	RAB2A	99	44.550
ENSFALG00000013624	RAB1A	60	33.571	ENSFALG00000005905	ARFRP1	68	33.571
ENSFALG00000013624	RAB1A	96	44.390	ENSFALG00000002594	-	87	44.390
ENSFALG00000013624	RAB1A	78	47.799	ENSFALG00000002597	RAB25	63	47.799
ENSFALG00000013624	RAB1A	78	49.375	ENSFALG00000001205	RAB15	76	49.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000013624	RAB1A	99	97.537	ENSG00000138069	RAB1A	99	99.083	Homo_sapiens
ENSFALG00000013624	RAB1A	99	94.059	ENSAPOG00000008143	-	100	94.059	Acanthochromis_polyacanthus
ENSFALG00000013624	RAB1A	99	97.537	ENSAMEG00000001127	RAB1A	99	99.505	Ailuropoda_melanoleuca
ENSFALG00000013624	RAB1A	99	94.059	ENSAOCG00000020606	-	99	95.939	Amphiprion_ocellaris
ENSFALG00000013624	RAB1A	99	94.059	ENSAPEG00000022488	-	100	94.059	Amphiprion_percula
ENSFALG00000013624	RAB1A	99	97.537	ENSANAG00000020929	RAB1A	99	97.537	Aotus_nancymaae
ENSFALG00000013624	RAB1A	99	94.554	ENSACLG00000003326	-	100	94.554	Astatotilapia_calliptera
ENSFALG00000013624	RAB1A	99	92.574	ENSAMXG00000034850	-	100	92.574	Astyanax_mexicanus
ENSFALG00000013624	RAB1A	99	97.537	ENSBTAG00000016720	RAB1A	99	99.492	Bos_taurus
ENSFALG00000013624	RAB1A	99	97.537	ENSCJAG00000046275	RAB1A	99	99.492	Callithrix_jacchus
ENSFALG00000013624	RAB1A	99	97.537	ENSCAFG00000003187	RAB1A	99	97.537	Canis_familiaris
ENSFALG00000013624	RAB1A	99	97.537	ENSCAFG00020026971	RAB1A	99	97.537	Canis_lupus_dingo
ENSFALG00000013624	RAB1A	99	97.537	ENSCHIG00000014060	RAB1A	100	97.573	Capra_hircus
ENSFALG00000013624	RAB1A	100	97.073	ENSTSYG00000005996	RAB1A	100	99.492	Carlito_syrichta
ENSFALG00000013624	RAB1A	99	97.537	ENSCPOG00000015437	RAB1A	99	97.537	Cavia_porcellus
ENSFALG00000013624	RAB1A	99	97.537	ENSCCAG00000021869	RAB1A	99	97.537	Cebus_capucinus
ENSFALG00000013624	RAB1A	99	97.537	ENSCATG00000030853	RAB1A	99	97.537	Cercocebus_atys
ENSFALG00000013624	RAB1A	99	97.537	ENSCLAG00000014766	RAB1A	99	97.537	Chinchilla_lanigera
ENSFALG00000013624	RAB1A	99	98.030	ENSCPBG00000013243	RAB1A	99	98.030	Chrysemys_picta_bellii
ENSFALG00000013624	RAB1A	99	95.074	ENSCANG00000035916	RAB1A	99	96.954	Colobus_angolensis_palliatus
ENSFALG00000013624	RAB1A	99	97.537	ENSCGRG00001012691	-	99	97.537	Cricetulus_griseus_chok1gshd
ENSFALG00000013624	RAB1A	99	97.537	ENSCGRG00000008456	-	99	97.537	Cricetulus_griseus_crigri
ENSFALG00000013624	RAB1A	99	97.537	ENSDNOG00000018236	RAB1A	99	97.537	Dasypus_novemcinctus
ENSFALG00000013624	RAB1A	99	97.537	ENSDORG00000028628	-	99	97.537	Dipodomys_ordii
ENSFALG00000013624	RAB1A	99	82.843	FBgn0285937	Rab1	99	82.843	Drosophila_melanogaster
ENSFALG00000013624	RAB1A	99	97.525	ENSETEG00000002205	RAB1A	100	97.525	Echinops_telfairi
ENSFALG00000013624	RAB1A	99	97.537	ENSEASG00005007298	RAB1A	99	97.537	Equus_asinus_asinus
ENSFALG00000013624	RAB1A	99	97.537	ENSECAG00000009926	RAB1A	99	97.537	Equus_caballus
ENSFALG00000013624	RAB1A	99	97.525	ENSEEUG00000011721	RAB1A	100	97.525	Erinaceus_europaeus
ENSFALG00000013624	RAB1A	99	93.627	ENSELUG00000012166	RAB1A	96	93.627	Esox_lucius
ENSFALG00000013624	RAB1A	99	97.537	ENSFCAG00000002536	RAB1A	99	97.537	Felis_catus
ENSFALG00000013624	RAB1A	99	97.537	ENSFDAG00000019505	-	99	97.537	Fukomys_damarensis
ENSFALG00000013624	RAB1A	99	93.069	ENSFHEG00000014414	-	100	93.069	Fundulus_heteroclitus
ENSFALG00000013624	RAB1A	99	98.030	ENSGALG00000031582	RAB1A	99	98.030	Gallus_gallus
ENSFALG00000013624	RAB1A	99	93.069	ENSGAFG00000000918	-	100	93.069	Gambusia_affinis
ENSFALG00000013624	RAB1A	99	98.030	ENSGAGG00000006802	RAB1A	99	98.030	Gopherus_agassizii
ENSFALG00000013624	RAB1A	99	97.537	ENSGGOG00000026603	RAB1A	99	99.492	Gorilla_gorilla
ENSFALG00000013624	RAB1A	99	98.020	ENSHGLG00000013585	RAB1A	99	98.020	Heterocephalus_glaber_female
ENSFALG00000013624	RAB1A	99	98.020	ENSHGLG00100007994	RAB1A	99	98.020	Heterocephalus_glaber_male
ENSFALG00000013624	RAB1A	99	97.537	ENSSTOG00000020693	-	100	98.030	Ictidomys_tridecemlineatus
ENSFALG00000013624	RAB1A	96	99.492	ENSJJAG00000014396	Rab1a	100	99.492	Jaculus_jaculus
ENSFALG00000013624	RAB1A	97	94.472	ENSKMAG00000014038	-	94	94.472	Kryptolebias_marmoratus
ENSFALG00000013624	RAB1A	99	93.564	ENSLBEG00000028426	RAB1A	100	93.564	Labrus_bergylta
ENSFALG00000013624	RAB1A	99	96.059	ENSLACG00000012869	RAB1A	99	96.059	Latimeria_chalumnae
ENSFALG00000013624	RAB1A	99	97.537	ENSLAFG00000016666	RAB1A	99	97.537	Loxodonta_africana
ENSFALG00000013624	RAB1A	99	97.537	ENSMFAG00000046246	RAB1A	99	97.537	Macaca_fascicularis
ENSFALG00000013624	RAB1A	99	97.537	ENSMMUG00000021721	RAB1A	97	96.698	Macaca_mulatta
ENSFALG00000013624	RAB1A	94	97.396	ENSMNEG00000028414	-	96	97.396	Macaca_nemestrina
ENSFALG00000013624	RAB1A	99	97.537	ENSMLEG00000042535	RAB1A	100	96.602	Mandrillus_leucophaeus
ENSFALG00000013624	RAB1A	99	94.554	ENSMZEG00005013959	-	100	94.554	Maylandia_zebra
ENSFALG00000013624	RAB1A	97	100.000	ENSMGAG00000004611	RAB1A	100	99.505	Meleagris_gallopavo
ENSFALG00000013624	RAB1A	99	97.044	ENSMAUG00000012156	Rab1a	99	97.044	Mesocricetus_auratus
ENSFALG00000013624	RAB1A	99	97.537	ENSMICG00000012587	RAB1A	99	97.537	Microcebus_murinus
ENSFALG00000013624	RAB1A	99	97.044	ENSMOCG00000017022	Rab1a	99	98.492	Microtus_ochrogaster
ENSFALG00000013624	RAB1A	99	92.079	ENSMMOG00000018709	RAB1A	100	92.079	Mola_mola
ENSFALG00000013624	RAB1A	99	98.030	ENSMODG00000003340	RAB1A	99	98.030	Monodelphis_domestica
ENSFALG00000013624	RAB1A	99	97.537	MGP_CAROLIEiJ_G0016115	Rab1a	99	97.537	Mus_caroli
ENSFALG00000013624	RAB1A	99	97.537	ENSMUSG00000020149	Rab1a	100	97.525	Mus_musculus
ENSFALG00000013624	RAB1A	99	97.537	MGP_PahariEiJ_G0016776	Rab1a	99	97.537	Mus_pahari
ENSFALG00000013624	RAB1A	99	97.537	MGP_SPRETEiJ_G0016958	Rab1a	100	97.525	Mus_spretus
ENSFALG00000013624	RAB1A	99	97.537	ENSMPUG00000006139	RAB1A	81	97.537	Mustela_putorius_furo
ENSFALG00000013624	RAB1A	99	97.537	ENSMLUG00000009489	RAB1A	99	97.537	Myotis_lucifugus
ENSFALG00000013624	RAB1A	99	97.537	ENSNGAG00000005838	Rab1a	99	97.537	Nannospalax_galili
ENSFALG00000013624	RAB1A	99	94.554	ENSNBRG00000020492	-	100	94.554	Neolamprologus_brichardi
ENSFALG00000013624	RAB1A	96	99.492	ENSOPRG00000006595	RAB1A	100	99.492	Ochotona_princeps
ENSFALG00000013624	RAB1A	94	99.479	ENSODEG00000011248	-	96	99.479	Octodon_degus
ENSFALG00000013624	RAB1A	99	92.118	ENSONIG00000006819	-	97	94.416	Oreochromis_niloticus
ENSFALG00000013624	RAB1A	99	98.030	ENSOANG00000012438	RAB1A	99	98.030	Ornithorhynchus_anatinus
ENSFALG00000013624	RAB1A	99	97.537	ENSOCUG00000017003	RAB1A	99	97.537	Oryctolagus_cuniculus
ENSFALG00000013624	RAB1A	99	97.537	ENSOGAG00000026181	RAB1A	99	97.537	Otolemur_garnettii
ENSFALG00000013624	RAB1A	99	97.537	ENSOARG00000019997	RAB1A	99	99.010	Ovis_aries
ENSFALG00000013624	RAB1A	99	97.525	ENSPPAG00000030253	RAB1A	100	97.525	Pan_paniscus
ENSFALG00000013624	RAB1A	99	97.537	ENSPPRG00000025077	RAB1A	99	97.537	Panthera_pardus
ENSFALG00000013624	RAB1A	97	99.495	ENSPTIG00000013471	RAB1A	100	98.529	Panthera_tigris_altaica
ENSFALG00000013624	RAB1A	99	97.537	ENSPTRG00000011989	RAB1A	98	98.990	Pan_troglodytes
ENSFALG00000013624	RAB1A	99	97.537	ENSPANG00000010485	RAB1A	99	97.537	Papio_anubis
ENSFALG00000013624	RAB1A	100	97.561	ENSPSIG00000008028	RAB1A	100	97.561	Pelodiscus_sinensis
ENSFALG00000013624	RAB1A	99	94.089	ENSPMGG00000021015	-	99	94.089	Periophthalmus_magnuspinnatus
ENSFALG00000013624	RAB1A	99	98.030	ENSPEMG00000009340	Rab1a	99	98.030	Peromyscus_maniculatus_bairdii
ENSFALG00000013624	RAB1A	99	98.030	ENSPCIG00000023212	RAB1A	99	98.030	Phascolarctos_cinereus
ENSFALG00000013624	RAB1A	99	91.667	ENSPFOG00000000498	-	99	91.667	Poecilia_formosa
ENSFALG00000013624	RAB1A	99	92.574	ENSPLAG00000015592	-	100	92.574	Poecilia_latipinna
ENSFALG00000013624	RAB1A	99	92.574	ENSPMEG00000005288	-	100	92.574	Poecilia_mexicana
ENSFALG00000013624	RAB1A	99	98.020	ENSPPYG00000012360	RAB1A	99	98.020	Pongo_abelii
ENSFALG00000013624	RAB1A	99	97.537	ENSPCOG00000017244	RAB1A	99	97.537	Propithecus_coquereli
ENSFALG00000013624	RAB1A	99	94.554	ENSPNYG00000015841	-	100	94.554	Pundamilia_nyererei
ENSFALG00000013624	RAB1A	99	97.537	ENSRNOG00000004992	Rab1a	99	97.537	Rattus_norvegicus
ENSFALG00000013624	RAB1A	99	97.537	ENSSBOG00000023732	RAB1A	99	97.537	Saimiri_boliviensis_boliviensis
ENSFALG00000013624	RAB1A	97	100.000	ENSSHAG00000003597	RAB1A	96	99.495	Sarcophilus_harrisii
ENSFALG00000013624	RAB1A	99	94.059	ENSSMAG00000021049	-	100	94.059	Scophthalmus_maximus
ENSFALG00000013624	RAB1A	99	94.554	ENSSDUG00000022535	RAB1A	100	94.554	Seriola_dumerili
ENSFALG00000013624	RAB1A	99	98.030	ENSSPUG00000012822	RAB1A	99	98.030	Sphenodon_punctatus
ENSFALG00000013624	RAB1A	99	94.059	ENSSPAG00000012564	-	100	94.059	Stegastes_partitus
ENSFALG00000013624	RAB1A	99	98.020	ENSSSCG00000008359	RAB1A	100	99.492	Sus_scrofa
ENSFALG00000013624	RAB1A	99	97.537	ENSTGUG00000002328	RAB1A	99	97.537	Taeniopygia_guttata
ENSFALG00000013624	RAB1A	99	93.564	ENSTRUG00000024994	RAB1A	100	93.564	Takifugu_rubripes
ENSFALG00000013624	RAB1A	97	99.495	ENSUMAG00000021038	RAB1A	99	99.495	Ursus_maritimus
ENSFALG00000013624	RAB1A	96	99.492	ENSVPAG00000005640	RAB1A	98	99.492	Vicugna_pacos
ENSFALG00000013624	RAB1A	99	97.537	ENSVVUG00000027588	RAB1A	99	97.537	Vulpes_vulpes
ENSFALG00000013624	RAB1A	99	93.069	ENSXMAG00000015776	-	100	93.069	Xiphophorus_maculatus